| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327210
Identifier: 116327210
GI number: 116327210
Start: 464503
End: 465840
Strand: Reverse
Name: 116327210
Synonym: LBL_0398
Alternate gene names: NA
Gene position: 465840-464503 (Counterclockwise)
Preceding gene: 116327211
Following gene: 116327208
Centisome position: 12.89
GC content: 39.99
Gene sequence:
>1338_bases ATGTTAATATTCCTCGATACTGTACCTCCGATAAACAAACTTATGAAAAAAATTATTTCATCTTCGATCTTCGTTTTTCT GATTTCATCTGTTTCACTTCGGAGCGAAGTTCTTCTTTTGAAATCCGGCAAGCAGGTGGTAGGAAACATCATCAACCAAG ATAAGGAAACCGTCACTTTTAAACTCACGGATGGGACGACGAAGGTTTTTCAGAAATCGGTCATTCGAAAAATTTCTTTT ACTAAAATTGCGGATCCTATCTTTAAAAAAGAAGAGATTTCAAAAAACAAAGAGGAAACTCAAGGGAAAAAAGAAGCGGC GGCACTTGCTGAAAAACAGAAATCCAAGAAAAAAAGTTTCGAAGAAAGAAAACAGGAACTTATAAATTCAAAAAGACATC ATCTCGAGGTTTCTTTCGGATTCGGAAATGGAGCCGAACAATCCGAGCTCCGACCTTTTTATCAAACCATTCAATATGCA AGTTTGGCTTTCAGTAGTTCGGGGCAGGCGGAAATTCTCACCAATCCATACAAAACACCAAACAATGGTTCTACGACTCG GATCCAGTATGCTTGGAATCGTTTTACGTTCGAGCTACGAGGGACGGAAGCGAAACATAATATCGACGTGAACGGATTTC AAACTCTTGCTTTTGGAACCGGAGGTTCAAATTCGTCCGGTGAAAGAGCGGTTAATGTAATCTTTGGAAACGCAAACACC AAATTTCAAAAAGTTTCTTCCCGCATCGGTTTTACTCCTTATCCACATCCCATCCTGGATCTGCAAATTTTTGGGGGTGT CGAGAGAATTTGGACAAGCACAAGTCAGGAAGTGGACAGTCTAGGGCCGTCTACGGCGAGTGGAATCAATCCGAGTCGTA TTAGTTTTCGAGAATATTCGAGTCATCATAAAGGATACAGTTTCGGAATCGGATTCGAATGGAAGTTCCTAAAACGATTT GTGTTTCAAGGACAAATCCTTCATCTGGATATGGCGAGCCCGTCTTCCTTTAAAAATTATGAATATAGAGTCGACGGTTC AAACGCCATTTTTCGTATCAACCAAGTCGGATTGGACTATTGGTGGAAGTCAACCGGAACCGAAATTAATCTCAAACTCT CCGCAAAGGTGAAAGGAAATTGGAGCGTATTTGTGGAAACGAGCAACATGACTTTAAAGAATACTCTTCAAACCGGTTAT ATATCCGACAATGATGCTAATCAGGAACAAATCGGACTGAAGATTTTCGGACCGAAAATTTTGATTCCGATGTTATACGA ATCCAAGACAATTCTTACCTATATTCAACTCGGTGTTAACTACCGTTTCAATTTCTGA
Upstream 100 bases:
>100_bases TATGGATCGCGGCAGGGCCGTCGGAAAAGATAATTTCGGATTCTTTTCGACTGAAATTTCATTCTTAGAAATTTAAATCG AATTGCAGAATTCAAACGAT
Downstream 100 bases:
>100_bases ATTTTTTTGGTGTCTTTCCAATTCCACCATTTTAACTTTTCCGAATTTGGTTTTTCGGTATTCAAGGAATAATAAACACA ACGGAAGACGTAAAGCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MLIFLDTVPPINKLMKKIISSSIFVFLISSVSLRSEVLLLKSGKQVVGNIINQDKETVTFKLTDGTTKVFQKSVIRKISF TKIADPIFKKEEISKNKEETQGKKEAAALAEKQKSKKKSFEERKQELINSKRHHLEVSFGFGNGAEQSELRPFYQTIQYA SLAFSSSGQAEILTNPYKTPNNGSTTRIQYAWNRFTFELRGTEAKHNIDVNGFQTLAFGTGGSNSSGERAVNVIFGNANT KFQKVSSRIGFTPYPHPILDLQIFGGVERIWTSTSQEVDSLGPSTASGINPSRISFREYSSHHKGYSFGIGFEWKFLKRF VFQGQILHLDMASPSSFKNYEYRVDGSNAIFRINQVGLDYWWKSTGTEINLKLSAKVKGNWSVFVETSNMTLKNTLQTGY ISDNDANQEQIGLKIFGPKILIPMLYESKTILTYIQLGVNYRFNF
Sequences:
>Translated_445_residues MLIFLDTVPPINKLMKKIISSSIFVFLISSVSLRSEVLLLKSGKQVVGNIINQDKETVTFKLTDGTTKVFQKSVIRKISF TKIADPIFKKEEISKNKEETQGKKEAAALAEKQKSKKKSFEERKQELINSKRHHLEVSFGFGNGAEQSELRPFYQTIQYA SLAFSSSGQAEILTNPYKTPNNGSTTRIQYAWNRFTFELRGTEAKHNIDVNGFQTLAFGTGGSNSSGERAVNVIFGNANT KFQKVSSRIGFTPYPHPILDLQIFGGVERIWTSTSQEVDSLGPSTASGINPSRISFREYSSHHKGYSFGIGFEWKFLKRF VFQGQILHLDMASPSSFKNYEYRVDGSNAIFRINQVGLDYWWKSTGTEINLKLSAKVKGNWSVFVETSNMTLKNTLQTGY ISDNDANQEQIGLKIFGPKILIPMLYESKTILTYIQLGVNYRFNF >Mature_445_residues MLIFLDTVPPINKLMKKIISSSIFVFLISSVSLRSEVLLLKSGKQVVGNIINQDKETVTFKLTDGTTKVFQKSVIRKISF TKIADPIFKKEEISKNKEETQGKKEAAALAEKQKSKKKSFEERKQELINSKRHHLEVSFGFGNGAEQSELRPFYQTIQYA SLAFSSSGQAEILTNPYKTPNNGSTTRIQYAWNRFTFELRGTEAKHNIDVNGFQTLAFGTGGSNSSGERAVNVIFGNANT KFQKVSSRIGFTPYPHPILDLQIFGGVERIWTSTSQEVDSLGPSTASGINPSRISFREYSSHHKGYSFGIGFEWKFLKRF VFQGQILHLDMASPSSFKNYEYRVDGSNAIFRINQVGLDYWWKSTGTEINLKLSAKVKGNWSVFVETSNMTLKNTLQTGY ISDNDANQEQIGLKIFGPKILIPMLYESKTILTYIQLGVNYRFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50242; Mature: 50242
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIFLDTVPPINKLMKKIISSSIFVFLISSVSLRSEVLLLKSGKQVVGNIINQDKETVTF CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCEEEE KLTDGTTKVFQKSVIRKISFTKIADPIFKKEEISKNKEETQGKKEAAALAEKQKSKKKSF EEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH EERKQELINSKRHHLEVSFGFGNGAEQSELRPFYQTIQYASLAFSSSGQAEILTNPYKTP HHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCC NNGSTTRIQYAWNRFTFELRGTEAKHNIDVNGFQTLAFGTGGSNSSGERAVNVIFGNANT CCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCC KFQKVSSRIGFTPYPHPILDLQIFGGVERIWTSTSQEVDSLGPSTASGINPSRISFREYS HHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHCCCCCCCCCCCCCEEHHHHH SHHKGYSFGIGFEWKFLKRFVFQGQILHLDMASPSSFKNYEYRVDGSNAIFRINQVGLDY CCCCCEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEE WWKSTGTEINLKLSAKVKGNWSVFVETSNMTLKNTLQTGYISDNDANQEQIGLKIFGPKI EECCCCCEEEEEEEEEEECCEEEEEEECCCEEEHHHEECCCCCCCCCHHHEEEEEECCEE LIPMLYESKTILTYIQLGVNYRFNF EEEEHCCCCEEEEEEEECCEEEECC >Mature Secondary Structure MLIFLDTVPPINKLMKKIISSSIFVFLISSVSLRSEVLLLKSGKQVVGNIINQDKETVTF CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCEEEE KLTDGTTKVFQKSVIRKISFTKIADPIFKKEEISKNKEETQGKKEAAALAEKQKSKKKSF EEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH EERKQELINSKRHHLEVSFGFGNGAEQSELRPFYQTIQYASLAFSSSGQAEILTNPYKTP HHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCC NNGSTTRIQYAWNRFTFELRGTEAKHNIDVNGFQTLAFGTGGSNSSGERAVNVIFGNANT CCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCC KFQKVSSRIGFTPYPHPILDLQIFGGVERIWTSTSQEVDSLGPSTASGINPSRISFREYS HHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHCCCCCCCCCCCCCEEHHHHH SHHKGYSFGIGFEWKFLKRFVFQGQILHLDMASPSSFKNYEYRVDGSNAIFRINQVGLDY CCCCCEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEE WWKSTGTEINLKLSAKVKGNWSVFVETSNMTLKNTLQTGYISDNDANQEQIGLKIFGPKI EECCCCCEEEEEEEEEEECCEEEEEEECCCEEEHHHEECCCCCCCCCHHHEEEEEECCEE LIPMLYESKTILTYIQLGVNYRFNF EEEEHCCCCEEEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA