Click here to switch to the map view.

The map label for this gene is insD1 [C]

Identifier: 116327198

GI number: 116327198

Start: 445614

End: 446645

Strand: Reverse

Name: insD1 [C]

Synonym: LBL_0380

Alternate gene names: 116327198

Gene position: 446645-445614 (Counterclockwise)

Preceding gene: 116327200

Following gene: 116327194

Centisome position: 12.36

GC content: 36.53

Gene sequence:

>1032_bases
TTGTTTTACGAAATTTCTATTCTGCTCAATCTGGTGCTGATTCTTCATGTTATCAACAAAATTGGAGCAGAATCAAATAA
TTCCATTCAAATCTTATTTCTAAAATCACAACTCTCAGCTTACAAACGAAAACGAAAAAAATTCCATACAAAACCTTTTG
AAAGATTGAAACTTGTCTTTCTTTCCTGTCTCGATCCCAATTGGATCGAAAATCTAATTCTTGTTTCTCCCCATACTCTT
CTTGAATGGAGGAATAATAAATTCAAAATATTTTGGGCCCTTCTTTCCCGTAAAAAGAAAACAGGGAGACCAAATATTCC
TTGGAAAGTCATCAAACTCATTCGAAGAGTCGCTAAGGAAAACAAAATCTGGGGAGCTACAAAACTGCACGGCCTTCTTC
TAAAGTTCGGTCATGATATTTGTGAAAGAACCGTTTCTAAATATATTCCCAAACGTCCTCATAGTCCTAAAAAACGTCTT
TCTTGGAAAGAGTTCTATTCTCTGCATGCCGATTCTATGGTTGTTTCCCATACTCTTTCCGTTTACTCTTCCAATTTCAA
AAAGATCTTTCGCGTCGTTTTCTTTCTTCACGTCGGCTCTAGACAAATTCTTCATTTCGATATTCATACAAACCCGACTA
CAAATTGGATGCGAAAGGTTTTGAAGTTTGCCGTTCGTAAGCAAATTCAAAAGGGAAAAACCTTCCATTATTTTCTTTCC
GACAACGATTTCATTTTTGGGAAACGCTTTACCAAATACTTGGAAAAAATCGGCATCAAACACAAAAAAAACTCTCTTCG
TTCTCCTTGGCAAAATTGTTACGCGGAACGTTGGATAAAGACATGTAGAAATGAATTTTTGGATTTCTTCATTCCTCTCA
ATCAGTATCACTTGGAAAAGAAATTGGAAGAGTTCATTCATTTTTACAACAACCACAGAACTCATCTCGCCTTAAACAAA
GACAGTCCCGTTCTAAATTGGCTGTTTGCGTTATCCGCGCTTCCTTCGATTCCTGCCATTTGGTATCCGTAA

Upstream 100 bases:

>100_bases
ATAACTATACATTCACATGAGGGTTGCGGGAGACTCAACATAATTCCACGTCCTACTGCATCTATTTCCGCTGGAATCAG
TGTTTAATCGAGGTTAATGG

Downstream 100 bases:

>100_bases
ACTTCCGTGACCCAGGCTCCTCTTGCCGCTTTCATGAGAGAGATCTGATTGTTGTAGTTAGCAACTGTGGATTGTTTTGT
TTGTTCCAGATCTAATAGTT

Product: transposase

Products: NA

Alternate protein names: Integrase; Transposase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; Transposase IS; Tranposase

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFYEISILLNLVLILHVINKIGAESNNSIQILFLKSQLSAYKRKRKKFHTKPFERLKLVFLSCLDPNWIENLILVSPHTL
LEWRNNKFKIFWALLSRKKKTGRPNIPWKVIKLIRRVAKENKIWGATKLHGLLLKFGHDICERTVSKYIPKRPHSPKKRL
SWKEFYSLHADSMVVSHTLSVYSSNFKKIFRVVFFLHVGSRQILHFDIHTNPTTNWMRKVLKFAVRKQIQKGKTFHYFLS
DNDFIFGKRFTKYLEKIGIKHKKNSLRSPWQNCYAERWIKTCRNEFLDFFIPLNQYHLEKKLEEFIHFYNNHRTHLALNK
DSPVLNWLFALSALPSIPAIWYP

Sequences:

>Translated_343_residues
MFYEISILLNLVLILHVINKIGAESNNSIQILFLKSQLSAYKRKRKKFHTKPFERLKLVFLSCLDPNWIENLILVSPHTL
LEWRNNKFKIFWALLSRKKKTGRPNIPWKVIKLIRRVAKENKIWGATKLHGLLLKFGHDICERTVSKYIPKRPHSPKKRL
SWKEFYSLHADSMVVSHTLSVYSSNFKKIFRVVFFLHVGSRQILHFDIHTNPTTNWMRKVLKFAVRKQIQKGKTFHYFLS
DNDFIFGKRFTKYLEKIGIKHKKNSLRSPWQNCYAERWIKTCRNEFLDFFIPLNQYHLEKKLEEFIHFYNNHRTHLALNK
DSPVLNWLFALSALPSIPAIWYP
>Mature_343_residues
MFYEISILLNLVLILHVINKIGAESNNSIQILFLKSQLSAYKRKRKKFHTKPFERLKLVFLSCLDPNWIENLILVSPHTL
LEWRNNKFKIFWALLSRKKKTGRPNIPWKVIKLIRRVAKENKIWGATKLHGLLLKFGHDICERTVSKYIPKRPHSPKKRL
SWKEFYSLHADSMVVSHTLSVYSSNFKKIFRVVFFLHVGSRQILHFDIHTNPTTNWMRKVLKFAVRKQIQKGKTFHYFLS
DNDFIFGKRFTKYLEKIGIKHKKNSLRSPWQNCYAERWIKTCRNEFLDFFIPLNQYHLEKKLEEFIHFYNNHRTHLALNK
DSPVLNWLFALSALPSIPAIWYP

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41075; Mature: 41075

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYEISILLNLVLILHVINKIGAESNNSIQILFLKSQLSAYKRKRKKFHTKPFERLKLVF
CEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHH
LSCLDPNWIENLILVSPHTLLEWRNNKFKIFWALLSRKKKTGRPNIPWKVIKLIRRVAKE
HHHCCCHHHCCEEEECCHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
NKIWGATKLHGLLLKFGHDICERTVSKYIPKRPHSPKKRLSWKEFYSLHADSMVVSHTLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
VYSSNFKKIFRVVFFLHVGSRQILHFDIHTNPTTNWMRKVLKFAVRKQIQKGKTFHYFLS
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
DNDFIFGKRFTKYLEKIGIKHKKNSLRSPWQNCYAERWIKTCRNEFLDFFIPLNQYHLEK
CCCEEHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
KLEEFIHFYNNHRTHLALNKDSPVLNWLFALSALPSIPAIWYP
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFYEISILLNLVLILHVINKIGAESNNSIQILFLKSQLSAYKRKRKKFHTKPFERLKLVF
CEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHH
LSCLDPNWIENLILVSPHTLLEWRNNKFKIFWALLSRKKKTGRPNIPWKVIKLIRRVAKE
HHHCCCHHHCCEEEECCHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
NKIWGATKLHGLLLKFGHDICERTVSKYIPKRPHSPKKRLSWKEFYSLHADSMVVSHTLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
VYSSNFKKIFRVVFFLHVGSRQILHFDIHTNPTTNWMRKVLKFAVRKQIQKGKTFHYFLS
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
DNDFIFGKRFTKYLEKIGIKHKKNSLRSPWQNCYAERWIKTCRNEFLDFFIPLNQYHLEK
CCCEEHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
KLEEFIHFYNNHRTHLALNKDSPVLNWLFALSALPSIPAIWYP
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA