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The map label for this gene is 116327194

Identifier: 116327194

GI number: 116327194

Start: 442034

End: 443032

Strand: Reverse

Name: 116327194

Synonym: LBL_0376

Alternate gene names: NA

Gene position: 443032-442034 (Counterclockwise)

Preceding gene: 116327198

Following gene: 116327192

Centisome position: 12.26

GC content: 39.34

Gene sequence:

>999_bases
TTGCCATTCTCGGCTTTGTTTAAATACGATTTAAAATTAGAATACGCAGCGGTGGTTCCGTTCTTTATGGATTTTATCTT
TTCAACTTCCAACAATTTTTGGTTCTGGGTAGTCGTTTTAGAAAAATTAATTCTTTTCTTTTTTTGGAAATTCTCTCCGA
AACAAGTTATGTATGTTTACAAAGTCCTTCAAACAAAATATAAAAGATTCTTCAAACTTTCAAGTCAAGGGAGGCCGACT
CGGGACGATTACTGGGATATATATTATCAGATTAAGGATATGTTAAGAGACAATCTGGATTGGGGAGCTTCTAAAATTCA
TGGTGAGATTTTAAAACTCGGCTTTGATCCTTCTTTGTCTTTAGTAAAGCGTATCATCACGAGGATCTTGAAAAGATCCA
ATCCGTCGGGTAATTGGAAATCCTGGTGGAAATTATTCGATCATCTCAAAAGTGAAGTCGTAGCAATGGATCTTTGCAGG
ATTCAAACTATTTACGGTACTACTTTGTATGCTCTTGCATTTATCGAGCGCTCTTCGAGAAAAATCATACATTTGAATAT
CACGGAACACCCGACCAGAATTTGGGTTTTACGCCAAATCGAGGAGACTAAGTCTCTTTGTATCAGGTTTCAAACTTTGT
TAAGCGACAATGACGTTTTGTTCTCGGGTCAAATAATTCTCAATGGTTTGCAGGAATTGGGAATTCAATTCCTTCACACA
CCTCCCGCTTCCCCTTGGTGCAACGGCATCATGGAACGGTGGTTCGGTTCTTTACGGAGGGAATGTCTCAATCATATCCC
GATCTTTTCTTTACATCATGCGCACCGCGTTGCGCAGGAATACGTTGATTACTACAATCATTGGAGGCCTCATCTGGCCT
TAAACAAGGATTCTCCTTGTGGTAGGGTCGTTACATTTCCAACTCCTACCTCCAAAGTTATCAAACGAAAAGTTTTGGGC
GGGTTACACCATGTTTATCTTAATTCAGAGGTCGCTTAA

Upstream 100 bases:

>100_bases
TCTATGTATGTAAAATTCCGGAATCTGGCATCTAACACCTAACCATTCAAACTATGCTTGTCTATGTTATAATCTGAATT
GAACTCTGTTCTTCTTGTTA

Downstream 100 bases:

>100_bases
TAATATGTCATCTTTTTTGCATTTTGTCAAATTCTAACATACTATACAAACGACAGTTTTTGGACTAGTACATTCTATGA
AACGTTTAGAAGGCACAAAA

Product: transposase IS1477

Products: NA

Alternate protein names: Transposase; Integrase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; Transposase IS; Tranposase

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSQGRPT
RDDYWDIYYQIKDMLRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCR
IQTIYGTTLYALAFIERSSRKIIHLNITEHPTRIWVLRQIEETKSLCIRFQTLLSDNDVLFSGQIILNGLQELGIQFLHT
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKVLG
GLHHVYLNSEVA

Sequences:

>Translated_332_residues
MPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSQGRPT
RDDYWDIYYQIKDMLRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCR
IQTIYGTTLYALAFIERSSRKIIHLNITEHPTRIWVLRQIEETKSLCIRFQTLLSDNDVLFSGQIILNGLQELGIQFLHT
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKVLG
GLHHVYLNSEVA
>Mature_331_residues
PFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSQGRPTR
DDYWDIYYQIKDMLRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRI
QTIYGTTLYALAFIERSSRKIIHLNITEHPTRIWVLRQIEETKSLCIRFQTLLSDNDVLFSGQIILNGLQELGIQFLHTP
PASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKVLGG
LHHVYLNSEVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39303; Mature: 39172

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVY
CCCHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHH
KVLQTKYKRFFKLSSQGRPTRDDYWDIYYQIKDMLRDNLDWGASKIHGEILKLGFDPSLS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHH
LVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRIQTIYGTTLYALAFIERSSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIIHLNITEHPTRIWVLRQIEETKSLCIRFQTLLSDNDVLFSGQIILNGLQELGIQFLHT
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCEEEEC
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
GRVVTFPTPTSKVIKRKVLGGLHHVYLNSEVA
CEEEECCCCHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
PFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVY
CCHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHH
KVLQTKYKRFFKLSSQGRPTRDDYWDIYYQIKDMLRDNLDWGASKIHGEILKLGFDPSLS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHH
LVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRIQTIYGTTLYALAFIERSSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIIHLNITEHPTRIWVLRQIEETKSLCIRFQTLLSDNDVLFSGQIILNGLQELGIQFLHT
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCEEEEC
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
GRVVTFPTPTSKVIKRKVLGGLHHVYLNSEVA
CEEEECCCCHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA