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The map label for this gene is 116327149

Identifier: 116327149

GI number: 116327149

Start: 380983

End: 382035

Strand: Direct

Name: 116327149

Synonym: LBL_0325

Alternate gene names: NA

Gene position: 380983-382035 (Clockwise)

Preceding gene: 116327148

Following gene: 116327150

Centisome position: 10.54

GC content: 39.22

Gene sequence:

>1053_bases
ATGAATCGTCTTTTGTTTTCATGTCTGTTATTGATTTTTCTTGCAGGAGAAATTTTTCCGGATGACGAACATGAGAATCA
TAGTTCTCCCATTTCTAATTTGGATAATTCTCCGGGAAATCTCGACACGGCCCGTCGTAGAGTTCAAATCACCGCTTTGA
ACACTGAAACTGTAAATCTCATTCGTGCCAATAACCTCGCTAAAGCTTCCGTCAACATAGATAAAATCAGAAAGTTGGAT
GCAAGTTCGGTGGAATACCACTATTTGAAGGGTTCTTATCTTTACGCGCAGGGAAAATATCCTCAAGCGGAAGATTTTCT
TTTGAAAGCGGTTCAGATTCATCCGAGTCACGACCCGTCTTATTATCTATTAGGAATGATCTTTGTTCAAAAGTCCGAAT
GGGCAAAGTCCTTGGAATATTTTCAGAAAGCGGCGGAGCTTTCCAATTATAATCCGTTTTACAGAATCAATTTGGCGTTG
GCTTATTTTGAAACCGGAAACTTTCTTCGAGCGAAGGCCGAAGCAGAAAGAGCGATCGAACTCAAACCGAATTTTAGGGA
CGCAAAACTTCTTCTTCTGAAATCCAATTTTCTTTTGGGCAATAAGGCGGATGCTTATTCTCAGTGTGTTGATTTCGTTA
AGGAAGGTTTTATATCTCGGGAGTACATGTTGATTCATGCGAGACTTGTAATGGAGATTCATCAAAATTATAGAAAAGCG
ATTGAAATTTACACTCAATACGGAGAACTCCCTTTTCAGGAAAAACGATTTTTAGCTCGTGCCTATTACAATATAGGAAA
CTATAGAGCGGCAGCCATAACGTATCAAGCTATCGTTCAGTTAAAAATCGCCCAAGAAGAAGACAAGATCGAATACATCC
GTTCTCTTTCATTTATTAAAGATTATAAAAGACTCGAATCTTTTGTGAATTCCTGGCTTCAAGAAGAGCCGGAAAAGCGA
AGTAAGATTCTAGAGATTTTGGATGTCGCGGAACTTTTGAAGGAGAACGATTCTAAGGTATTTCACATGTTTCCTTCGCG
GTCTCCATACTGA

Upstream 100 bases:

>100_bases
ACTCTAAAAGCGATTCCGGAAAACCTAGAAGCGACAGTAAATCTTCTTCGGGCGAAAAGAATTGAATCAAGTTTGATTCT
TTTCGGATAAAGACAATCGT

Downstream 100 bases:

>100_bases
ACGTTTTGAGTTAGCGATCCATAAGAACTGTAACCTTGAAAATGGTTTTGGAATAAGAAGAACCGAAAACGCACATTTTT
AACTGTTTTTATAAGAGCGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNRLLFSCLLLIFLAGEIFPDDEHENHSSPISNLDNSPGNLDTARRRVQITALNTETVNLIRANNLAKASVNIDKIRKLD
ASSVEYHYLKGSYLYAQGKYPQAEDFLLKAVQIHPSHDPSYYLLGMIFVQKSEWAKSLEYFQKAAELSNYNPFYRINLAL
AYFETGNFLRAKAEAERAIELKPNFRDAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISREYMLIHARLVMEIHQNYRKA
IEIYTQYGELPFQEKRFLARAYYNIGNYRAAAITYQAIVQLKIAQEEDKIEYIRSLSFIKDYKRLESFVNSWLQEEPEKR
SKILEILDVAELLKENDSKVFHMFPSRSPY

Sequences:

>Translated_350_residues
MNRLLFSCLLLIFLAGEIFPDDEHENHSSPISNLDNSPGNLDTARRRVQITALNTETVNLIRANNLAKASVNIDKIRKLD
ASSVEYHYLKGSYLYAQGKYPQAEDFLLKAVQIHPSHDPSYYLLGMIFVQKSEWAKSLEYFQKAAELSNYNPFYRINLAL
AYFETGNFLRAKAEAERAIELKPNFRDAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISREYMLIHARLVMEIHQNYRKA
IEIYTQYGELPFQEKRFLARAYYNIGNYRAAAITYQAIVQLKIAQEEDKIEYIRSLSFIKDYKRLESFVNSWLQEEPEKR
SKILEILDVAELLKENDSKVFHMFPSRSPY
>Mature_350_residues
MNRLLFSCLLLIFLAGEIFPDDEHENHSSPISNLDNSPGNLDTARRRVQITALNTETVNLIRANNLAKASVNIDKIRKLD
ASSVEYHYLKGSYLYAQGKYPQAEDFLLKAVQIHPSHDPSYYLLGMIFVQKSEWAKSLEYFQKAAELSNYNPFYRINLAL
AYFETGNFLRAKAEAERAIELKPNFRDAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISREYMLIHARLVMEIHQNYRKA
IEIYTQYGELPFQEKRFLARAYYNIGNYRAAAITYQAIVQLKIAQEEDKIEYIRSLSFIKDYKRLESFVNSWLQEEPEKR
SKILEILDVAELLKENDSKVFHMFPSRSPY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40768; Mature: 40768

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLLFSCLLLIFLAGEIFPDDEHENHSSPISNLDNSPGNLDTARRRVQITALNTETVNL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHEEEEEEECCCEEEE
IRANNLAKASVNIDKIRKLDASSVEYHYLKGSYLYAQGKYPQAEDFLLKAVQIHPSHDPS
EECCCCEEECCCHHHHHHCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHEEECCCCCCC
YYLLGMIFVQKSEWAKSLEYFQKAAELSNYNPFYRINLALAYFETGNFLRAKAEAERAIE
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEHHHHCCEEE
LKPNFRDAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISREYMLIHARLVMEIHQNYRKA
ECCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IEIYTQYGELPFQEKRFLARAYYNIGNYRAAAITYQAIVQLKIAQEEDKIEYIRSLSFIK
HHHHHHHCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH
DYKRLESFVNSWLQEEPEKRSKILEILDVAELLKENDSKVFHMFPSRSPY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MNRLLFSCLLLIFLAGEIFPDDEHENHSSPISNLDNSPGNLDTARRRVQITALNTETVNL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHEEEEEEECCCEEEE
IRANNLAKASVNIDKIRKLDASSVEYHYLKGSYLYAQGKYPQAEDFLLKAVQIHPSHDPS
EECCCCEEECCCHHHHHHCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHEEECCCCCCC
YYLLGMIFVQKSEWAKSLEYFQKAAELSNYNPFYRINLALAYFETGNFLRAKAEAERAIE
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEEHHHHCCEEE
LKPNFRDAKLLLLKSNFLLGNKADAYSQCVDFVKEGFISREYMLIHARLVMEIHQNYRKA
ECCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IEIYTQYGELPFQEKRFLARAYYNIGNYRAAAITYQAIVQLKIAQEEDKIEYIRSLSFIK
HHHHHHHCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH
DYKRLESFVNSWLQEEPEKRSKILEILDVAELLKENDSKVFHMFPSRSPY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA