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The map label for this gene is 116327127

Identifier: 116327127

GI number: 116327127

Start: 359586

End: 360377

Strand: Direct

Name: 116327127

Synonym: LBL_0303

Alternate gene names: NA

Gene position: 359586-360377 (Clockwise)

Preceding gene: 116327126

Following gene: 116327128

Centisome position: 9.95

GC content: 40.78

Gene sequence:

>792_bases
ATGAAGTTTGTAATTTTATTTGTATCAAGCATTTGCCTCTCCATTTTGTCTTTTTCCTTATCGGCGCAATCGAATGAGGA
ATACTACACCTCTGCTCTCAAGGAATTCGAAGCGAAGAACTATGAGAAATCTTTAGAAATGATTCGCTCCCTTCATGAAA
AAGGAAAACGTTCTTATGAATCTCACTATCTTGCGGGCCATTGCCATTTTGCTTTAGGTAGGACTAAGTCCGCTGGTTCT
CATTGGTCCGAAGCCCTTTCCATCAAACCCGGAGATGCGGCGGTCAGTTTGGATTATACAAAATATCTTTTAAACAACGG
AAGGGAATTCGACGGCTTGCAAGTGATTGCTCGCGCGTTCGAACTTAATCCGCGTAATAAGGACATTCGTCTTCTTTTCG
GAACTGCACTTCTTTATAACGGGAAAGCGAGAGACGCCCTTAATATCACTGAAAGATTAAAGGCGGAAGATCCCAATGAC
TATCGTCCTTTGGTGTTGGAAGGACAGATTTATTATTATCTCGGAAGTATTGAAAAAGCGGAAGTAAGTCTGAAATGGGC
CAATTCTCTTGTTCCGAATAATGCGAACGTGTTAAATAACCTTGCGCTGGTTTATGAGAAGGCTTCCAGTCAGGAAAGTA
AAAAAGGCAAATTCGGTAACGCGAAGAATTTTTTAAATTCCGCAAAAGAACAAATCGAATCCGCACTGAAACTCGAGCCT
GAAAATCCCCACTTTAAAGATAATCTAAAAAGAATTGAAGCTAAACTTAATGCCCTCGTCACCAATAGCTGA

Upstream 100 bases:

>100_bases
CGGTGGAACCTTTTCATTCTCTCATCGATTGCATTAATGCGAAATCAATGAGTATGACGGCCTAAGGAATTCAAAAGAGC
ATATTATGTAAAACCGCACC

Downstream 100 bases:

>100_bases
AAGAACGGTTCTTTTCAATACTTTAGGATGCAGGCTTAACTTTTTCGAGTCGGACGGTTTATTTTCGTCCTTGAGCAAAC
ACGGATTTCGTTCCGTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKFVILFVSSICLSILSFSLSAQSNEEYYTSALKEFEAKNYEKSLEMIRSLHEKGKRSYESHYLAGHCHFALGRTKSAGS
HWSEALSIKPGDAAVSLDYTKYLLNNGREFDGLQVIARAFELNPRNKDIRLLFGTALLYNGKARDALNITERLKAEDPND
YRPLVLEGQIYYYLGSIEKAEVSLKWANSLVPNNANVLNNLALVYEKASSQESKKGKFGNAKNFLNSAKEQIESALKLEP
ENPHFKDNLKRIEAKLNALVTNS

Sequences:

>Translated_263_residues
MKFVILFVSSICLSILSFSLSAQSNEEYYTSALKEFEAKNYEKSLEMIRSLHEKGKRSYESHYLAGHCHFALGRTKSAGS
HWSEALSIKPGDAAVSLDYTKYLLNNGREFDGLQVIARAFELNPRNKDIRLLFGTALLYNGKARDALNITERLKAEDPND
YRPLVLEGQIYYYLGSIEKAEVSLKWANSLVPNNANVLNNLALVYEKASSQESKKGKFGNAKNFLNSAKEQIESALKLEP
ENPHFKDNLKRIEAKLNALVTNS
>Mature_263_residues
MKFVILFVSSICLSILSFSLSAQSNEEYYTSALKEFEAKNYEKSLEMIRSLHEKGKRSYESHYLAGHCHFALGRTKSAGS
HWSEALSIKPGDAAVSLDYTKYLLNNGREFDGLQVIARAFELNPRNKDIRLLFGTALLYNGKARDALNITERLKAEDPND
YRPLVLEGQIYYYLGSIEKAEVSLKWANSLVPNNANVLNNLALVYEKASSQESKKGKFGNAKNFLNSAKEQIESALKLEP
ENPHFKDNLKRIEAKLNALVTNS

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29637; Mature: 29637

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVILFVSSICLSILSFSLSAQSNEEYYTSALKEFEAKNYEKSLEMIRSLHEKGKRSYE
CEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SHYLAGHCHFALGRTKSAGSHWSEALSIKPGDAAVSLDYTKYLLNNGREFDGLQVIARAF
HCEEEEEEEEEECCCCCCCCHHHHHEECCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHH
ELNPRNKDIRLLFGTALLYNGKARDALNITERLKAEDPNDYRPLVLEGQIYYYLGSIEKA
HCCCCCCCEEEEEEEEHEECCCCCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCH
EVSLKWANSLVPNNANVLNNLALVYEKASSQESKKGKFGNAKNFLNSAKEQIESALKLEP
HEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ENPHFKDNLKRIEAKLNALVTNS
CCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFVILFVSSICLSILSFSLSAQSNEEYYTSALKEFEAKNYEKSLEMIRSLHEKGKRSYE
CEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SHYLAGHCHFALGRTKSAGSHWSEALSIKPGDAAVSLDYTKYLLNNGREFDGLQVIARAF
HCEEEEEEEEEECCCCCCCCHHHHHEECCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHH
ELNPRNKDIRLLFGTALLYNGKARDALNITERLKAEDPNDYRPLVLEGQIYYYLGSIEKA
HCCCCCCCEEEEEEEEHEECCCCCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCH
EVSLKWANSLVPNNANVLNNLALVYEKASSQESKKGKFGNAKNFLNSAKEQIESALKLEP
HEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ENPHFKDNLKRIEAKLNALVTNS
CCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA