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The map label for this gene is yacL [H]

Identifier: 116327106

GI number: 116327106

Start: 331949

End: 332980

Strand: Direct

Name: yacL [H]

Synonym: LBL_0281

Alternate gene names: 116327106

Gene position: 331949-332980 (Clockwise)

Preceding gene: 116327105

Following gene: 116327107

Centisome position: 9.18

GC content: 40.21

Gene sequence:

>1032_bases
ATGGTTCATCTCTACAAAGTACTCACGTCTCTATTCCTTTCTGGAATTACATTTGCAGTAACAGATAAGCAAGCTGGAGA
TTTTTATTTGGCTGGCTCTACTGCTGGAGTTGTTTTATTAATTTCCTTTATTCTCCTTTACGGAGAATCCAATCTTTTTC
CAAAACTCAAAGCCGATGTACTTTTTTGTGCCGGGCTCGGTACTCTTATCGGACTTGCGATTGCTTGGTTTGTGGGAACT
GCCGTTCATTTTGAGGAATTAAACGTAGCCTTTTACTTTTTATTCGCTTTGTTTGGCGCTCTTTCGGGAATTGCATTTGC
TAAGGAACCAGGTCTCGGAATTTTCGGTGGCGGCGGTTCTGGAAACGGATTTGGAGTTGGTATTGAAAAGGAAGAAGTCA
GAGATAAAATTCTAGATACCTCGGTGGTAATCGATGGAAGAATTTTAGATATTGCGGATACGCATTTTTTAGACGGGCCT
TTGATTCTCCCTAATTTTGTATTGAGAGAAATCCAACTCATCAGTGATTCTTCTGATCCGATCAAAAGAGCGAGAGGAAG
AAGAGGGCTTGAAATGTTGAATAAACTTCAACGCAAAGGCTCAATCGAAGTAAAAATTACTTATAAAGACTATTCTGATA
CTCGTGAAGTTGACGCTAAACTGATTAAATTAGCGAGAGATACCGGTGGAAAAATAGTAACCAACGATTTCAATCTGAAT
AAAGTTGCCGAATTACAAGGGGTAAAGGTCCTGAACTTAAATACTCTTGCAAATGCCCTGAAACCAGTCGTTCTTCCCGG
AGAAGAACTTGGAATTCAAGTGATTAAAGAAGGAAAAGATGAAAATCAAGGAATCGGTTATTTGGAAGATGGTACGATGG
TTGTCATTGAAAATGGCGGTCACCTCATTGGGAAAGAAGTCAAAGTGACAGTAACTTCCATTATTCAAACTGCGGCCGGG
AAAATGATCTTCACGAAAGCAAACCCGAATGGAGCTTCTGAAAAGGGAAACCGCCAACCCCATTCTTCTTGA

Upstream 100 bases:

>100_bases
CGTTTCCGACGTATTAGCAAGCACCCTTGCTCCTAGTGAAAAAAAGGCAGAAGAGGACTAAAATTCCGCGAAAACTCAAA
TACAATTAAGGATTTGAGTT

Downstream 100 bases:

>100_bases
ATCGATTGACTTTCGGCTTTAGCATAAAATAATTGAAATAGAATCCTAAGGAGCAATCAAATGCAGGCCCAGACGACTCA
GGTAAAAGGCTTGAAGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MVHLYKVLTSLFLSGITFAVTDKQAGDFYLAGSTAGVVLLISFILLYGESNLFPKLKADVLFCAGLGTLIGLAIAWFVGT
AVHFEELNVAFYFLFALFGALSGIAFAKEPGLGIFGGGGSGNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGP
LILPNFVLREIQLISDSSDPIKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGGHLIGKEVKVTVTSIIQTAAG
KMIFTKANPNGASEKGNRQPHSS

Sequences:

>Translated_343_residues
MVHLYKVLTSLFLSGITFAVTDKQAGDFYLAGSTAGVVLLISFILLYGESNLFPKLKADVLFCAGLGTLIGLAIAWFVGT
AVHFEELNVAFYFLFALFGALSGIAFAKEPGLGIFGGGGSGNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGP
LILPNFVLREIQLISDSSDPIKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGGHLIGKEVKVTVTSIIQTAAG
KMIFTKANPNGASEKGNRQPHSS
>Mature_343_residues
MVHLYKVLTSLFLSGITFAVTDKQAGDFYLAGSTAGVVLLISFILLYGESNLFPKLKADVLFCAGLGTLIGLAIAWFVGT
AVHFEELNVAFYFLFALFGALSGIAFAKEPGLGIFGGGGSGNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGP
LILPNFVLREIQLISDSSDPIKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGGHLIGKEVKVTVTSIIQTAAG
KMIFTKANPNGASEKGNRQPHSS

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 36871; Mature: 36871

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHLYKVLTSLFLSGITFAVTDKQAGDFYLAGSTAGVVLLISFILLYGESNLFPKLKADV
CCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHE
LFCAGLGTLIGLAIAWFVGTAVHFEELNVAFYFLFALFGALSGIAFAKEPGLGIFGGGGS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCC
GNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGPLILPNFVLREIQLISDSSDP
CCCEECCCCHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCH
IKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
HHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGG
HHHHHCCEEEEEHHHHHHHHCCEEECCHHHHHHHEECCCCCCCCCCEEECCCEEEECCCC
HLIGKEVKVTVTSIIQTAAGKMIFTKANPNGASEKGNRQPHSS
EEECCEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVHLYKVLTSLFLSGITFAVTDKQAGDFYLAGSTAGVVLLISFILLYGESNLFPKLKADV
CCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHE
LFCAGLGTLIGLAIAWFVGTAVHFEELNVAFYFLFALFGALSGIAFAKEPGLGIFGGGGS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCC
GNGFGVGIEKEEVRDKILDTSVVIDGRILDIADTHFLDGPLILPNFVLREIQLISDSSDP
CCCEECCCCHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCH
IKRARGRRGLEMLNKLQRKGSIEVKITYKDYSDTREVDAKLIKLARDTGGKIVTNDFNLN
HHHHHCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
KVAELQGVKVLNLNTLANALKPVVLPGEELGIQVIKEGKDENQGIGYLEDGTMVVIENGG
HHHHHCCEEEEEHHHHHHHHCCEEECCHHHHHHHEECCCCCCCCCCEEECCCEEEECCCC
HLIGKEVKVTVTSIIQTAAGKMIFTKANPNGASEKGNRQPHSS
EEECCEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]