| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327027
Identifier: 116327027
GI number: 116327027
Start: 236904
End: 238922
Strand: Direct
Name: 116327027
Synonym: LBL_0200
Alternate gene names: NA
Gene position: 236904-238922 (Clockwise)
Preceding gene: 116327025
Following gene: 116327029
Centisome position: 6.55
GC content: 36.7
Gene sequence:
>2019_bases ATGAGCAAACCGGTTTTAAATCAGTCGTTTGGTGGAGGAAATCAAACGCAAAACTTTTTAAAAGTTAAAAAAATCAATGA AGTGGTTAGCTATTATCTAAATGACCGACTTACGCATTCCGTTTATAAGGCGATCGTTACTCAGACAAGCCATAAGAACG TTAAATCTCAAAATTTATTTCAAGTAGAATCTAGAGTTCCTGAAGCTTCCGAACTTACGACTACGGAAGTGGTGTTTCAC ATCAAGCGATTATTGGAAGACGAAGTCGTTCTTCAATTCGCTTACTTTTACATAGACCCTGCCACATCCGACTTAAAATT AAAACCTTGTTACGTCGCGTATACGGATGCGGAGCCTGGCGATCTCACACGTATTTATCTTTCTTTGATTGATCTTTCTA TCAATTCGATCTTATCTTACTTGGAAAACAGACCGCCGCTTGGAAAAGAAGTTTTATGGGAAGATTTGGAAACGGATTTT AAGGGCGAGGATCTACAAAAGTTAAAACTTTTCTTTAATCCTGAAAGTTTTTTTCAAGCGCCCAATATTAGCGTTCCCTT AAATCCCGAATATGTAAAAGATATGTTGGTCGAGATCACGGATGGATTGATTAAAAAAGGGAGAATTAGGGAAATACCGG AATTCGGATATTTGGTCATAAAAACCAAAGAACTACAGACGTTATTTGAACTCGTGGATGAATTTCATTTTAAAAAGGTG TTTCCAAAATACAAATGGGCCTTGTCGGATTCATTTGCCGCGATTTCTCATGAAGAAAGGATGCATACAAACGATCCATC CGCAACTCCGACGACACTCTTCGGAAAAAAAAGGGCTAAGGCGGTGGGGAAAGTTATAGAATCCGATTCGGAAAGAAAAT CGAAGCGCAAATTCATGGGAGTCGAGCTGATACAAAGTTTAAGTGAAGAGGTTGAAAGTTCTCTCAAAATTTCGTATCAA GAAGAGATTCGAAACCGTTTTCACGAGATGACCGATCATCTTTCCAAACAAACCGGGCGCTGGGATAGACTCGTATTATT CATTCCTGATGAAGAATTTAAAACCTATCCTGCCGGATTGAAAAAACTTTTTACGGAAGATTCACATATCGCTTATTCGC CTTGGGAAACAAAAGGAATTACGATGCATTCTTTTATGAGAGTCGACGTGGAAACCGTTAAGTCTGTCGTAAAATCATTA ACAATGACGGCTAATGTGGATGCGTGGAAGATATTAAGTATTCGTAATTTGATTGAACTTAACGAAGATGCCATACAGAC CGTTTTTAAAGACGAAGAATTTGTGAAGAATTACGGAAAGGTTCTTCGAAAAGGATACGTAAAGTATTTTCCGTGGTACT TTGGGATTTTGGATTTCGTGGGAGTTGCAAAACTTATCCAAGATATTTTCTTCCAAGCGGCCAAAGAAAAAATTCGATCG GAACAATCGTTGTTCAAATCAAGAAATCGAGATATAGCTTTCAAGTTGGAGCAAAAGGAAATCCAGGAAAAATTAAAAGA AGACGAGAAAATAAAATCTTTAGAACAAAAATCCAAACTTTCGGAAGCTCTTAACCGATATTATTTTGAAAGAAATATTC CGCCGGTGTTGAAGGATATTCTTTACGAAGTTCCTGGGTATTCCCCTGAATTGATTCAGCAGATTATAGAACGTGATAAA TTCGTTCTGATACCGGATTCCGATCCTGCGAAAGACAAAACGGATTCGATTTTGATTTATCCGGAAGATGAATCCTTTCG TTTCAGGGCGAAAGAAATCCATAAAGTCTTATCGGAAAAAAAGAAAAATTTAGAATTTAAATTGAGTAACAAAGAAGAAG ATTTTCAAAAGGAAAAAATTATCAAAACTTTAAAGTATTTGGATTCTTGGTTTTCTGCCAAACCGGAAATTTCTAAAGGT GCTAAAAGTAGCGCTTCGGTAAGTTCAAACGAAGATCCGTATGAAAATTTTCGAAAAGAAATTATAAAGATCAAAGGAAA AGAGAAAATTTCACTATAG
Upstream 100 bases:
>100_bases CGGAAAACTTGAGTTTGGAACGAGTTGTGGAATTTTTTCATCTGAAAAGCTTTTTGAAAAATCTAAAAATAATTCTAATA GTTTAAACAGTGGAGAAGCG
Downstream 100 bases:
>100_bases TTCTAATTGATCACTTCAAGAAGCTATTTCAGAGATAACTTATGAAAACTTCTATAAGAATTTGTCCCAAAACTTCGTAG AAATATCACCGTGAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 672; Mature: 671
Protein sequence:
>672_residues MSKPVLNQSFGGGNQTQNFLKVKKINEVVSYYLNDRLTHSVYKAIVTQTSHKNVKSQNLFQVESRVPEASELTTTEVVFH IKRLLEDEVVLQFAYFYIDPATSDLKLKPCYVAYTDAEPGDLTRIYLSLIDLSINSILSYLENRPPLGKEVLWEDLETDF KGEDLQKLKLFFNPESFFQAPNISVPLNPEYVKDMLVEITDGLIKKGRIREIPEFGYLVIKTKELQTLFELVDEFHFKKV FPKYKWALSDSFAAISHEERMHTNDPSATPTTLFGKKRAKAVGKVIESDSERKSKRKFMGVELIQSLSEEVESSLKISYQ EEIRNRFHEMTDHLSKQTGRWDRLVLFIPDEEFKTYPAGLKKLFTEDSHIAYSPWETKGITMHSFMRVDVETVKSVVKSL TMTANVDAWKILSIRNLIELNEDAIQTVFKDEEFVKNYGKVLRKGYVKYFPWYFGILDFVGVAKLIQDIFFQAAKEKIRS EQSLFKSRNRDIAFKLEQKEIQEKLKEDEKIKSLEQKSKLSEALNRYYFERNIPPVLKDILYEVPGYSPELIQQIIERDK FVLIPDSDPAKDKTDSILIYPEDESFRFRAKEIHKVLSEKKKNLEFKLSNKEEDFQKEKIIKTLKYLDSWFSAKPEISKG AKSSASVSSNEDPYENFRKEIIKIKGKEKISL
Sequences:
>Translated_672_residues MSKPVLNQSFGGGNQTQNFLKVKKINEVVSYYLNDRLTHSVYKAIVTQTSHKNVKSQNLFQVESRVPEASELTTTEVVFH IKRLLEDEVVLQFAYFYIDPATSDLKLKPCYVAYTDAEPGDLTRIYLSLIDLSINSILSYLENRPPLGKEVLWEDLETDF KGEDLQKLKLFFNPESFFQAPNISVPLNPEYVKDMLVEITDGLIKKGRIREIPEFGYLVIKTKELQTLFELVDEFHFKKV FPKYKWALSDSFAAISHEERMHTNDPSATPTTLFGKKRAKAVGKVIESDSERKSKRKFMGVELIQSLSEEVESSLKISYQ EEIRNRFHEMTDHLSKQTGRWDRLVLFIPDEEFKTYPAGLKKLFTEDSHIAYSPWETKGITMHSFMRVDVETVKSVVKSL TMTANVDAWKILSIRNLIELNEDAIQTVFKDEEFVKNYGKVLRKGYVKYFPWYFGILDFVGVAKLIQDIFFQAAKEKIRS EQSLFKSRNRDIAFKLEQKEIQEKLKEDEKIKSLEQKSKLSEALNRYYFERNIPPVLKDILYEVPGYSPELIQQIIERDK FVLIPDSDPAKDKTDSILIYPEDESFRFRAKEIHKVLSEKKKNLEFKLSNKEEDFQKEKIIKTLKYLDSWFSAKPEISKG AKSSASVSSNEDPYENFRKEIIKIKGKEKISL >Mature_671_residues SKPVLNQSFGGGNQTQNFLKVKKINEVVSYYLNDRLTHSVYKAIVTQTSHKNVKSQNLFQVESRVPEASELTTTEVVFHI KRLLEDEVVLQFAYFYIDPATSDLKLKPCYVAYTDAEPGDLTRIYLSLIDLSINSILSYLENRPPLGKEVLWEDLETDFK GEDLQKLKLFFNPESFFQAPNISVPLNPEYVKDMLVEITDGLIKKGRIREIPEFGYLVIKTKELQTLFELVDEFHFKKVF PKYKWALSDSFAAISHEERMHTNDPSATPTTLFGKKRAKAVGKVIESDSERKSKRKFMGVELIQSLSEEVESSLKISYQE EIRNRFHEMTDHLSKQTGRWDRLVLFIPDEEFKTYPAGLKKLFTEDSHIAYSPWETKGITMHSFMRVDVETVKSVVKSLT MTANVDAWKILSIRNLIELNEDAIQTVFKDEEFVKNYGKVLRKGYVKYFPWYFGILDFVGVAKLIQDIFFQAAKEKIRSE QSLFKSRNRDIAFKLEQKEIQEKLKEDEKIKSLEQKSKLSEALNRYYFERNIPPVLKDILYEVPGYSPELIQQIIERDKF VLIPDSDPAKDKTDSILIYPEDESFRFRAKEIHKVLSEKKKNLEFKLSNKEEDFQKEKIIKTLKYLDSWFSAKPEISKGA KSSASVSSNEDPYENFRKEIIKIKGKEKISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78264; Mature: 78132
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPVLNQSFGGGNQTQNFLKVKKINEVVSYYLNDRLTHSVYKAIVTQTSHKNVKSQNLF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH QVESRVPEASELTTTEVVFHIKRLLEDEVVLQFAYFYIDPATSDLKLKPCYVAYTDAEPG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEECCEEEEECCCCCC DLTRIYLSLIDLSINSILSYLENRPPLGKEVLWEDLETDFKGEDLQKLKLFFNPESFFQA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHEECCHHHHCC PNISVPLNPEYVKDMLVEITDGLIKKGRIREIPEFGYLVIKTKELQTLFELVDEFHFKKV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH FPKYKWALSDSFAAISHEERMHTNDPSATPTTLFGKKRAKAVGKVIESDSERKSKRKFMG CCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VELIQSLSEEVESSLKISYQEEIRNRFHEMTDHLSKQTGRWDRLVLFIPDEEFKTYPAGL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH KKLFTEDSHIAYSPWETKGITMHSFMRVDVETVKSVVKSLTMTANVDAWKILSIRNLIEL HHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC NEDAIQTVFKDEEFVKNYGKVLRKGYVKYFPWYFGILDFVGVAKLIQDIFFQAAKEKIRS CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQSLFKSRNRDIAFKLEQKEIQEKLKEDEKIKSLEQKSKLSEALNRYYFERNIPPVLKDI HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LYEVPGYSPELIQQIIERDKFVLIPDSDPAKDKTDSILIYPEDESFRFRAKEIHKVLSEK HHHCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH KKNLEFKLSNKEEDFQKEKIIKTLKYLDSWFSAKPEISKGAKSSASVSSNEDPYENFRKE HHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHH IIKIKGKEKISL HHHHCCCCCCCC >Mature Secondary Structure SKPVLNQSFGGGNQTQNFLKVKKINEVVSYYLNDRLTHSVYKAIVTQTSHKNVKSQNLF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH QVESRVPEASELTTTEVVFHIKRLLEDEVVLQFAYFYIDPATSDLKLKPCYVAYTDAEPG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEECCEEEEECCCCCC DLTRIYLSLIDLSINSILSYLENRPPLGKEVLWEDLETDFKGEDLQKLKLFFNPESFFQA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHEECCHHHHCC PNISVPLNPEYVKDMLVEITDGLIKKGRIREIPEFGYLVIKTKELQTLFELVDEFHFKKV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH FPKYKWALSDSFAAISHEERMHTNDPSATPTTLFGKKRAKAVGKVIESDSERKSKRKFMG CCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VELIQSLSEEVESSLKISYQEEIRNRFHEMTDHLSKQTGRWDRLVLFIPDEEFKTYPAGL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH KKLFTEDSHIAYSPWETKGITMHSFMRVDVETVKSVVKSLTMTANVDAWKILSIRNLIEL HHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC NEDAIQTVFKDEEFVKNYGKVLRKGYVKYFPWYFGILDFVGVAKLIQDIFFQAAKEKIRS CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQSLFKSRNRDIAFKLEQKEIQEKLKEDEKIKSLEQKSKLSEALNRYYFERNIPPVLKDI HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LYEVPGYSPELIQQIIERDKFVLIPDSDPAKDKTDSILIYPEDESFRFRAKEIHKVLSEK HHHCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH KKNLEFKLSNKEEDFQKEKIIKTLKYLDSWFSAKPEISKGAKSSASVSSNEDPYENFRKE HHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHH IIKIKGKEKISL HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA