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The map label for this gene is 116326981

Identifier: 116326981

GI number: 116326981

Start: 177245

End: 178867

Strand: Direct

Name: 116326981

Synonym: LBL_0150

Alternate gene names: NA

Gene position: 177245-178867 (Clockwise)

Preceding gene: 116326980

Following gene: 116326982

Centisome position: 4.9

GC content: 41.47

Gene sequence:

>1623_bases
TTGAAATCTAGGTTATCGGCATTTAGCATCTGTTTGATTTTGTTTCTAGCAACGGATGCATTTGCACAAAAGAGATACGG
ACTTATTTTCGGTTCTAATTATACCGGCAATAAAGCCGGAATTCCGGAACTTAATCTTTGCGAAGCGGACGCAAGTTATC
TGAACGACGAAATTCGAAAAGTCGGAAATTTCGATGAAGTAAAGGTCGTTCTCGGAAAAGAAGTCACAAAAAATAATATA
GAAAAAGAGATTAAGGCCTTAGCAAAAAAAGCGGGTGATAACGATACGGTTCTACTTTATTTCTCTGGACATGGCGCATT
TCAAAGGGACGCATCTGCAAAGAACGGGATGAGAAATCTGATCATTTGTTATGATAGACCTCATCTTCCGGACGACGAAC
TAAATCAGTATTTAGAAAAAATAAAATCGCCCAAAACGGTGTTTATTTTCGATTGTTGTTTTTCGGGCGGAATCGCTAAA
AAAGGGAAAGCAACTCGAGGATCTGCCGATGTTCCGATTCCGGAAGGTAGTGCCGGAACCGTAAAACAAGATGCGGAAGA
TTTTTTCTTTCAAGATAAAACGATCATCTCTTCCGCGGATGACAATCAGACCGCGATAGAAGTTGGTGGAAGTATCAATC
ATGGAATTTTTACGTACAATTTCGGGCGTGCACTTGGTACCGCGGACTTAAATAAAGATAACGTTGTTACTGCGTTGGAA
GCCTTCTTCAAATCGAGAGAAGAAACCGTTCAGATGGCGAAAAAATTTCAACACGAACAAGTTCCTCAGATTTCCGGAAA
CGCTTCGGGTATTTTCCTTTCTGGTAAAAAAAATCCGGAACCTCCAAAACCGATCGATCCTCCAAAACCTCCTCCTCCAT
CCGTAGAACCTGAACCCGATCCCGTAAAACCGGATCCTTCTCAACCTGTAGTAACTCCGGAAGAACCTCCAGTAGTTCCG
ACAAATGAAAGAGGTGATTTGGTGTTAAAGACTACGATCATTCAAGATCGCGCTTATGGACTTTCGGATCTTCCTCCCGA
TGTTTTGATCTTTGCTAAGAAGAAAAGGAAAGGGAATCGAAACGTTAAAGTTTATATCGATGATCAAGAATTTGCTTCAG
CTATAGCTACGACTTCTTCCAATTTCTGGGGTGCGGTTAAGAGACAAGGACAGTTGATTCCAGGTAATATCTACACGATT
ACCTTGAGTAGAGTTCCTGCGGGGGTTCATAAGATCACGATCAAAGCCGACGACTATCCCGAGATTCAGGAGACATTTGC
GGTTCTTCCGAACAAGAGAAATGAACTTCCCATTTATGTTTCTATGAGCGGTTTCGGGGCGATTCAAGGAAAAGTTTTCT
ATAAAACCTTGGATAATCCTGTGATCAATCAGCCGATTTTTATGCCTACCATTTCCAGCGTTACCGGAATTCAAAAATTA
AATACCGATAGCGAGGGAAATTTCTGGTTCACAAATCTCAAGCCGGGTGATTATGAAATTAAAGCTTCTTTTGCGGAAGA
TTTGAATCTCAACAATTCCATGATCAACGTAAGAGAAGGGGACGTGACGAAGGTGGACGTGATTCTAAATGTGAAGATGC
CTTCTACCAAAACCAAGTACTGA

Upstream 100 bases:

>100_bases
CTAAATTTGGAAGTCTTGATTCTTTCCTTAAAAAGATAATGACAAAAGGATTTCTTTTGCTACCTTGATTCCATTCTAAA
TGAACCCTAGGAGGTCAGGT

Downstream 100 bases:

>100_bases
ATTTCGTATTGGAGTTTAATGAAAAAAAGCCTGCTAAGAACAGCAGGCTTTTTTATTTTCGGAATTTTCTTAAAAAAATA
TGAAAGTACCGTTTTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Signal Peptide

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKSRLSAFSICLILFLATDAFAQKRYGLIFGSNYTGNKAGIPELNLCEADASYLNDEIRKVGNFDEVKVVLGKEVTKNNI
EKEIKALAKKAGDNDTVLLYFSGHGAFQRDASAKNGMRNLIICYDRPHLPDDELNQYLEKIKSPKTVFIFDCCFSGGIAK
KGKATRGSADVPIPEGSAGTVKQDAEDFFFQDKTIISSADDNQTAIEVGGSINHGIFTYNFGRALGTADLNKDNVVTALE
AFFKSREETVQMAKKFQHEQVPQISGNASGIFLSGKKNPEPPKPIDPPKPPPPSVEPEPDPVKPDPSQPVVTPEEPPVVP
TNERGDLVLKTTIIQDRAYGLSDLPPDVLIFAKKKRKGNRNVKVYIDDQEFASAIATTSSNFWGAVKRQGQLIPGNIYTI
TLSRVPAGVHKITIKADDYPEIQETFAVLPNKRNELPIYVSMSGFGAIQGKVFYKTLDNPVINQPIFMPTISSVTGIQKL
NTDSEGNFWFTNLKPGDYEIKASFAEDLNLNNSMINVREGDVTKVDVILNVKMPSTKTKY

Sequences:

>Translated_540_residues
MKSRLSAFSICLILFLATDAFAQKRYGLIFGSNYTGNKAGIPELNLCEADASYLNDEIRKVGNFDEVKVVLGKEVTKNNI
EKEIKALAKKAGDNDTVLLYFSGHGAFQRDASAKNGMRNLIICYDRPHLPDDELNQYLEKIKSPKTVFIFDCCFSGGIAK
KGKATRGSADVPIPEGSAGTVKQDAEDFFFQDKTIISSADDNQTAIEVGGSINHGIFTYNFGRALGTADLNKDNVVTALE
AFFKSREETVQMAKKFQHEQVPQISGNASGIFLSGKKNPEPPKPIDPPKPPPPSVEPEPDPVKPDPSQPVVTPEEPPVVP
TNERGDLVLKTTIIQDRAYGLSDLPPDVLIFAKKKRKGNRNVKVYIDDQEFASAIATTSSNFWGAVKRQGQLIPGNIYTI
TLSRVPAGVHKITIKADDYPEIQETFAVLPNKRNELPIYVSMSGFGAIQGKVFYKTLDNPVINQPIFMPTISSVTGIQKL
NTDSEGNFWFTNLKPGDYEIKASFAEDLNLNNSMINVREGDVTKVDVILNVKMPSTKTKY
>Mature_540_residues
MKSRLSAFSICLILFLATDAFAQKRYGLIFGSNYTGNKAGIPELNLCEADASYLNDEIRKVGNFDEVKVVLGKEVTKNNI
EKEIKALAKKAGDNDTVLLYFSGHGAFQRDASAKNGMRNLIICYDRPHLPDDELNQYLEKIKSPKTVFIFDCCFSGGIAK
KGKATRGSADVPIPEGSAGTVKQDAEDFFFQDKTIISSADDNQTAIEVGGSINHGIFTYNFGRALGTADLNKDNVVTALE
AFFKSREETVQMAKKFQHEQVPQISGNASGIFLSGKKNPEPPKPIDPPKPPPPSVEPEPDPVKPDPSQPVVTPEEPPVVP
TNERGDLVLKTTIIQDRAYGLSDLPPDVLIFAKKKRKGNRNVKVYIDDQEFASAIATTSSNFWGAVKRQGQLIPGNIYTI
TLSRVPAGVHKITIKADDYPEIQETFAVLPNKRNELPIYVSMSGFGAIQGKVFYKTLDNPVINQPIFMPTISSVTGIQKL
NTDSEGNFWFTNLKPGDYEIKASFAEDLNLNNSMINVREGDVTKVDVILNVKMPSTKTKY

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59411; Mature: 59411

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRLSAFSICLILFLATDAFAQKRYGLIFGSNYTGNKAGIPELNLCEADASYLNDEIRK
CCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHH
VGNFDEVKVVLGKEVTKNNIEKEIKALAKKAGDNDTVLLYFSGHGAFQRDASAKNGMRNL
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHCCCCEE
IICYDRPHLPDDELNQYLEKIKSPKTVFIFDCCFSGGIAKKGKATRGSADVPIPEGSAGT
EEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
VKQDAEDFFFQDKTIISSADDNQTAIEVGGSINHGIFTYNFGRALGTADLNKDNVVTALE
CHHCHHHHHCCCCEEEECCCCCCEEEEECCCCCCCEEEEECCCEECCCCCCCCHHHHHHH
AFFKSREETVQMAKKFQHEQVPQISGNASGIFLSGKKNPEPPKPIDPPKPPPPSVEPEPD
HHHHCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PVKPDPSQPVVTPEEPPVVPTNERGDLVLKTTIIQDRAYGLSDLPPDVLIFAKKKRKGNR
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
NVKVYIDDQEFASAIATTSSNFWGAVKRQGQLIPGNIYTITLSRVPAGVHKITIKADDYP
EEEEEECCHHHHHHHHHCCCCHHHHHHHCCEECCCCEEEEEEECCCCCEEEEEEECCCCC
EIQETFAVLPNKRNELPIYVSMSGFGAIQGKVFYKTLDNPVINQPIFMPTISSVTGIQKL
HHHHHHHHCCCCCCCCEEEEEECCCCEECCEEEEEECCCCCCCCCEECCCHHHHHHHHHC
NTDSEGNFWFTNLKPGDYEIKASFAEDLNLNNSMINVREGDVTKVDVILNVKMPSTKTKY
CCCCCCCEEEECCCCCCEEEEEEHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKSRLSAFSICLILFLATDAFAQKRYGLIFGSNYTGNKAGIPELNLCEADASYLNDEIRK
CCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHH
VGNFDEVKVVLGKEVTKNNIEKEIKALAKKAGDNDTVLLYFSGHGAFQRDASAKNGMRNL
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHCCCCEE
IICYDRPHLPDDELNQYLEKIKSPKTVFIFDCCFSGGIAKKGKATRGSADVPIPEGSAGT
EEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
VKQDAEDFFFQDKTIISSADDNQTAIEVGGSINHGIFTYNFGRALGTADLNKDNVVTALE
CHHCHHHHHCCCCEEEECCCCCCEEEEECCCCCCCEEEEECCCEECCCCCCCCHHHHHHH
AFFKSREETVQMAKKFQHEQVPQISGNASGIFLSGKKNPEPPKPIDPPKPPPPSVEPEPD
HHHHCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PVKPDPSQPVVTPEEPPVVPTNERGDLVLKTTIIQDRAYGLSDLPPDVLIFAKKKRKGNR
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
NVKVYIDDQEFASAIATTSSNFWGAVKRQGQLIPGNIYTITLSRVPAGVHKITIKADDYP
EEEEEECCHHHHHHHHHCCCCHHHHHHHCCEECCCCEEEEEEECCCCCEEEEEEECCCCC
EIQETFAVLPNKRNELPIYVSMSGFGAIQGKVFYKTLDNPVINQPIFMPTISSVTGIQKL
HHHHHHHHCCCCCCCCEEEEEECCCCEECCEEEEEECCCCCCCCCEECCCHHHHHHHHHC
NTDSEGNFWFTNLKPGDYEIKASFAEDLNLNNSMINVREGDVTKVDVILNVKMPSTKTKY
CCCCCCCEEEECCCCCCEEEEEEHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA