| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326874
Identifier: 116326874
GI number: 116326874
Start: 32470
End: 34017
Strand: Direct
Name: 116326874
Synonym: LBL_0026
Alternate gene names: NA
Gene position: 32470-34017 (Clockwise)
Preceding gene: 116326873
Following gene: 116326875
Centisome position: 0.9
GC content: 42.05
Gene sequence:
>1548_bases ATGCGATTATTATTACTTTGTATGTTAATTTTATGTAGTTGTGAAGGGCCGCCAAAGCCCGAAATGTTACCGGTCCCAGA TGAAAGGGAAGAGATTCCGTTGGAAAGAATTCAAGAAGAGTTGAGTTCTGAAAATCCTCAAATTAGGGCACAAGCCATTT TAGAACTTTCTAATAGATCTCATAAGACTTCCTTGAGCAAGATCCGGAATTTACTTAAAACCGATACGAGTCCTGCCGTA AAAGGAACGGCCGCAATCGTGTTAGGATCTTGGAAAGATCGGGCTTCCATTCCGGAAATCGTAAAACTATTTTCAAACGA ATCCGGCGTTACTCCTGATGTAGTGTTGGAAGCTCTTGCAAGGATGAAGGATGCTTCCTCCTCTAAAGCGATTCTTCCTT TTTTGCAGTCTCAAGATTCTACTTTGAGATTAATTGCGGTCGATGCTTTGGTCCGCATCGGAGCTTATTCTTCCGGTAAG TCTATACTCGACCTAGCCAATAAAAACAAAGATCCCGAACTTGCAAAAACGTATGCGATGGCTTTAGGAAAACTTAAAGT TCGTTCTGCAGAGTCGTATTTGATAAAACTCGCGCAAACAACTGAACCGTCTCCTACATTAGCGGCTTCTTATATTGCGT TGGGAAGAATTTCGAGTAAAAGAGCGATCCCGATCTTAGTCCAAGGACTTGCAGGGGATTTTGATAAGGGAAGTGAAAAT TGTATGAACGCTCTGATCGAGATAAACAGTTCAACCGCGATCACGTCCACGATTCCAATTTTAAAGCATAAAAATCGAGA CATTCGCTATCGTGCCGTGAATGTCCTTTCGGAAATTCCTTCTTTCGAAACGGGACCCAAAGTTCTGAAAATCCTTGAAG GAAACGATCCGGACGCAGTTGCGCCCGCCGCTTTGGTTTTAGGAAGAATTCATTTTAATTCGGCGCGCGTAGCGATCGAA AAGAATTTGACAAATTCTAAATTACCCGACCGAGAAATGATTGGGCGTTCTCTGGGTTATTTAGGAGATAAAAAAAGCAT TCCAGTTTTGTTGAATGTTCTCAAAGAATCGGAAGGCGAAGGTAGGTATGGAGCGGCCTGGTCTTTGGGCATTTTACATG CGATCGAAGCTTTGGATGATTTGATTGCCGCTTCCAAGTCCTCTGATCCAAAGCTTTCTTCTATAGCTGTGGAATCGCTC GGATTATTAGGTTCTTCGAAAGCGCTCCCTACTCTTGTTGAAATTGCGGAAAACAATCCGGATTCCGCGCTGGTTGTTGT TTCTACGATTGCGTCGATTCCTGGAGAAGAATCCCGTAAGATTTTAGAGAATTTTGCACAGAAGAAAAATATTTCCTTAC AGCAGGTTGCAATTTCTGAGTTAGGAAAACGAAAGGAACAAGCAAGTATTCCCGTTTTGATTAAAATTTTGGAGAAAAAC CGGGCCGTAAGTTCTAAACTTTTGATGACTTCTCTTTCAGCGATCACAGGAAAGAACTTTTACTCTCGGAACGAATGGTT GAACTGGTATAAACTCAACTCGAAGTAA
Upstream 100 bases:
>100_bases TGAACTTTCAGAATTAAAACAGGTTCAGAGTCAGATTCCCCGTTCGTAATCTTTTCTGCTTCACAAATCCGAATTCAAAG ATATATCCAGGAGAGGGTCA
Downstream 100 bases:
>100_bases GTCACATTTATGTTTCATTCTAAAACGATCCCATTTATTTTGATGGGATTTATAGTTCTCGGTTCGTTCTGTAAAACCTC CCCTTCAAAGGATTCCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MRLLLLCMLILCSCEGPPKPEMLPVPDEREEIPLERIQEELSSENPQIRAQAILELSNRSHKTSLSKIRNLLKTDTSPAV KGTAAIVLGSWKDRASIPEIVKLFSNESGVTPDVVLEALARMKDASSSKAILPFLQSQDSTLRLIAVDALVRIGAYSSGK SILDLANKNKDPELAKTYAMALGKLKVRSAESYLIKLAQTTEPSPTLAASYIALGRISSKRAIPILVQGLAGDFDKGSEN CMNALIEINSSTAITSTIPILKHKNRDIRYRAVNVLSEIPSFETGPKVLKILEGNDPDAVAPAALVLGRIHFNSARVAIE KNLTNSKLPDREMIGRSLGYLGDKKSIPVLLNVLKESEGEGRYGAAWSLGILHAIEALDDLIAASKSSDPKLSSIAVESL GLLGSSKALPTLVEIAENNPDSALVVVSTIASIPGEESRKILENFAQKKNISLQQVAISELGKRKEQASIPVLIKILEKN RAVSSKLLMTSLSAITGKNFYSRNEWLNWYKLNSK
Sequences:
>Translated_515_residues MRLLLLCMLILCSCEGPPKPEMLPVPDEREEIPLERIQEELSSENPQIRAQAILELSNRSHKTSLSKIRNLLKTDTSPAV KGTAAIVLGSWKDRASIPEIVKLFSNESGVTPDVVLEALARMKDASSSKAILPFLQSQDSTLRLIAVDALVRIGAYSSGK SILDLANKNKDPELAKTYAMALGKLKVRSAESYLIKLAQTTEPSPTLAASYIALGRISSKRAIPILVQGLAGDFDKGSEN CMNALIEINSSTAITSTIPILKHKNRDIRYRAVNVLSEIPSFETGPKVLKILEGNDPDAVAPAALVLGRIHFNSARVAIE KNLTNSKLPDREMIGRSLGYLGDKKSIPVLLNVLKESEGEGRYGAAWSLGILHAIEALDDLIAASKSSDPKLSSIAVESL GLLGSSKALPTLVEIAENNPDSALVVVSTIASIPGEESRKILENFAQKKNISLQQVAISELGKRKEQASIPVLIKILEKN RAVSSKLLMTSLSAITGKNFYSRNEWLNWYKLNSK >Mature_515_residues MRLLLLCMLILCSCEGPPKPEMLPVPDEREEIPLERIQEELSSENPQIRAQAILELSNRSHKTSLSKIRNLLKTDTSPAV KGTAAIVLGSWKDRASIPEIVKLFSNESGVTPDVVLEALARMKDASSSKAILPFLQSQDSTLRLIAVDALVRIGAYSSGK SILDLANKNKDPELAKTYAMALGKLKVRSAESYLIKLAQTTEPSPTLAASYIALGRISSKRAIPILVQGLAGDFDKGSEN CMNALIEINSSTAITSTIPILKHKNRDIRYRAVNVLSEIPSFETGPKVLKILEGNDPDAVAPAALVLGRIHFNSARVAIE KNLTNSKLPDREMIGRSLGYLGDKKSIPVLLNVLKESEGEGRYGAAWSLGILHAIEALDDLIAASKSSDPKLSSIAVESL GLLGSSKALPTLVEIAENNPDSALVVVSTIASIPGEESRKILENFAQKKNISLQQVAISELGKRKEQASIPVLIKILEKN RAVSSKLLMTSLSAITGKNFYSRNEWLNWYKLNSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55884; Mature: 55884
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLLLCMLILCSCEGPPKPEMLPVPDEREEIPLERIQEELSSENPQIRAQAILELSNRS CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC HKTSLSKIRNLLKTDTSPAVKGTAAIVLGSWKDRASIPEIVKLFSNESGVTPDVVLEALA HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH RMKDASSSKAILPFLQSQDSTLRLIAVDALVRIGAYSSGKSILDLANKNKDPELAKTYAM HHHCCCCCCEEHHHHCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHH ALGKLKVRSAESYLIKLAQTTEPSPTLAASYIALGRISSKRAIPILVQGLAGDFDKGSEN HHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCHHH CMNALIEINSSTAITSTIPILKHKNRDIRYRAVNVLSEIPSFETGPKVLKILEGNDPDAV HHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCHH APAALVLGRIHFNSARVAIEKNLTNSKLPDREMIGRSLGYLGDKKSIPVLLNVLKESEGE HHHHHHHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC GRYGAAWSLGILHAIEALDDLIAASKSSDPKLSSIAVESLGLLGSSKALPTLVEIAENNP CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC DSALVVVSTIASIPGEESRKILENFAQKKNISLQQVAISELGKRKEQASIPVLIKILEKN CCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH RAVSSKLLMTSLSAITGKNFYSRNEWLNWYKLNSK HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC >Mature Secondary Structure MRLLLLCMLILCSCEGPPKPEMLPVPDEREEIPLERIQEELSSENPQIRAQAILELSNRS CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC HKTSLSKIRNLLKTDTSPAVKGTAAIVLGSWKDRASIPEIVKLFSNESGVTPDVVLEALA HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH RMKDASSSKAILPFLQSQDSTLRLIAVDALVRIGAYSSGKSILDLANKNKDPELAKTYAM HHHCCCCCCEEHHHHCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHH ALGKLKVRSAESYLIKLAQTTEPSPTLAASYIALGRISSKRAIPILVQGLAGDFDKGSEN HHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCHHH CMNALIEINSSTAITSTIPILKHKNRDIRYRAVNVLSEIPSFETGPKVLKILEGNDPDAV HHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCHH APAALVLGRIHFNSARVAIEKNLTNSKLPDREMIGRSLGYLGDKKSIPVLLNVLKESEGE HHHHHHHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC GRYGAAWSLGILHAIEALDDLIAASKSSDPKLSSIAVESLGLLGSSKALPTLVEIAENNP CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC DSALVVVSTIASIPGEESRKILENFAQKKNISLQQVAISELGKRKEQASIPVLIKILEKN CCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH RAVSSKLLMTSLSAITGKNFYSRNEWLNWYKLNSK HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA