| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116326864
Identifier: 116326864
GI number: 116326864
Start: 16405
End: 17961
Strand: Direct
Name: 116326864
Synonym: LBL_0013
Alternate gene names: NA
Gene position: 16405-17961 (Clockwise)
Preceding gene: 116326862
Following gene: 116326865
Centisome position: 0.45
GC content: 37.38
Gene sequence:
>1557_bases ATGCTAAGAAATTTATTTTTTTTTCTCTGTTTTACAGCCCAGCCGGTATTCTCTACAAATGTAATTTTTCTTCCTGGGAA GGTAGAGGGAAATTTACCGGCGACTTTGGAAAGAATCGATGACAGATCGCGGGAAATTTCCAAATTTGGGGCTTTTTATG CAAACTTGTTACTAAGAGCGAAAGTAAATACGATCGAGAAAATCAAGGATAAGGAAATTTTTAACAAATTTCGAAACTCT CATTTTAGAAAAGAAGACTTTGCAAAAATTTGCTCCGAATTTACCGCTGATTTTTTAGTTCGAGACGAAGTCGGTTTTCA AAACAGTATTTCTCTCGATCGGATCGTATACAATTGTGCGCAGAAACAACTGGATGAATTCCATCTTTCCGAAAAATCGG ATCTTTTCTTTTTAATGCGATCGATGACGGAACGCTCGTTTCCTTGGGTGCCTTCTAAAAGAAAACAAACTGCTACTTCA ATATGGAAGAAAAGTACGAAAGAATTAATTTTTATCGTCGATCTATCCCCTTCTTTCCAAAGAGAAAGAGAAGAGTGGGC GCAATTCGTTAAAAATGCGTCTTGGGATTCCATGACCGGGATTCGGATTGTTACTTTTTCGGAAGGAAAAGTTTCTATTC TCCCCAAAGTGAGTTCGTCGGCGGAATTAAGAAAACAGATTGGGAGTTTGAAATCGTTTGGCAAATCGAGTTTGGAGGAT TTATCGGAAGCGTTATTGCGTACGAGACGTTCGTTAATCCAATCCGGGAATAGAATTCAAGGTGCTCAAGACATAATCAT TCTCACAAATGCGAAAGGGAAAATTCCAAACCATAGTTTGTTTTCCGCCGTTCAAGGTTTACAATCTTCCGGTTATCGAG TTCAATTATTTACCGCGCCGTATTTTTCCATTTCTCAAACTCAGTTTCTCAAAGGAATTTTTCCTAAAGAAGGTTTTTTT GAAATAACGTATTTCAAAAAAATCAGCACTTTAAAAGATTCAAAAACTCTAATATTTAGAGGGAGACAAATTTATTTCAC ATATTCGGAAGTTTCTCCAAAACGGATTCCACAGGAATCCTTTCTCAATAAGGTTTCTTATTCGGGAAAATATACGGAAT CGGAATCGATTAATCCTCTAAATTTTACGAATATATATGCCGAGTTGACGGGAGATAAAATTCTGGCTTCGGATTCTTTA CAGGACAATCTTTCGTTTTTGCTTTCTCAAAGTCTATTTAAGGAAGAGTTTAAAGGAGAAAATGAAACTGAAATTTTGGT AAAATCCGGGGAAAAAGCCTTTTGGGTTTCGCTTCCATTCGGGGTTAAAATCCCCCGAGTTGACGAACAGATCCTATATC AAACGACTTATGTTTCATCAGGGAACTCTGCGGACGGAGTCGCAAATGTCGCTAGCCTTACGGAAGATTACAAACTTTCC CCTCCTCGGATTTTGGAATGTACACCGATTCAAGTAAGAAACTATTTTCAGAATACGAATAAAAGTTCTTTTGATTGTAT AATCCGAGGTAGAGTTCTGCAAGTCAAAGGGTTATAA
Upstream 100 bases:
>100_bases TTTGCCAAGTTTGTGCAACTCATTTTTTAATCGGTTGCTTTGAATCCTGGATTTCCTCATATTAACTTAAAAACCCATTT ACGTCGCACAAAGTTATACC
Downstream 100 bases:
>100_bases TTTTTGGAGAAGGGATCCACATTTGAATTCCGAAGAACATATTTTTATCACCAACGCTTCGAATTCGATTAAAGTATTAA ATCGACTCAAGTCTTTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MLRNLFFFLCFTAQPVFSTNVIFLPGKVEGNLPATLERIDDRSREISKFGAFYANLLLRAKVNTIEKIKDKEIFNKFRNS HFRKEDFAKICSEFTADFLVRDEVGFQNSISLDRIVYNCAQKQLDEFHLSEKSDLFFLMRSMTERSFPWVPSKRKQTATS IWKKSTKELIFIVDLSPSFQREREEWAQFVKNASWDSMTGIRIVTFSEGKVSILPKVSSSAELRKQIGSLKSFGKSSLED LSEALLRTRRSLIQSGNRIQGAQDIIILTNAKGKIPNHSLFSAVQGLQSSGYRVQLFTAPYFSISQTQFLKGIFPKEGFF EITYFKKISTLKDSKTLIFRGRQIYFTYSEVSPKRIPQESFLNKVSYSGKYTESESINPLNFTNIYAELTGDKILASDSL QDNLSFLLSQSLFKEEFKGENETEILVKSGEKAFWVSLPFGVKIPRVDEQILYQTTYVSSGNSADGVANVASLTEDYKLS PPRILECTPIQVRNYFQNTNKSSFDCIIRGRVLQVKGL
Sequences:
>Translated_518_residues MLRNLFFFLCFTAQPVFSTNVIFLPGKVEGNLPATLERIDDRSREISKFGAFYANLLLRAKVNTIEKIKDKEIFNKFRNS HFRKEDFAKICSEFTADFLVRDEVGFQNSISLDRIVYNCAQKQLDEFHLSEKSDLFFLMRSMTERSFPWVPSKRKQTATS IWKKSTKELIFIVDLSPSFQREREEWAQFVKNASWDSMTGIRIVTFSEGKVSILPKVSSSAELRKQIGSLKSFGKSSLED LSEALLRTRRSLIQSGNRIQGAQDIIILTNAKGKIPNHSLFSAVQGLQSSGYRVQLFTAPYFSISQTQFLKGIFPKEGFF EITYFKKISTLKDSKTLIFRGRQIYFTYSEVSPKRIPQESFLNKVSYSGKYTESESINPLNFTNIYAELTGDKILASDSL QDNLSFLLSQSLFKEEFKGENETEILVKSGEKAFWVSLPFGVKIPRVDEQILYQTTYVSSGNSADGVANVASLTEDYKLS PPRILECTPIQVRNYFQNTNKSSFDCIIRGRVLQVKGL >Mature_518_residues MLRNLFFFLCFTAQPVFSTNVIFLPGKVEGNLPATLERIDDRSREISKFGAFYANLLLRAKVNTIEKIKDKEIFNKFRNS HFRKEDFAKICSEFTADFLVRDEVGFQNSISLDRIVYNCAQKQLDEFHLSEKSDLFFLMRSMTERSFPWVPSKRKQTATS IWKKSTKELIFIVDLSPSFQREREEWAQFVKNASWDSMTGIRIVTFSEGKVSILPKVSSSAELRKQIGSLKSFGKSSLED LSEALLRTRRSLIQSGNRIQGAQDIIILTNAKGKIPNHSLFSAVQGLQSSGYRVQLFTAPYFSISQTQFLKGIFPKEGFF EITYFKKISTLKDSKTLIFRGRQIYFTYSEVSPKRIPQESFLNKVSYSGKYTESESINPLNFTNIYAELTGDKILASDSL QDNLSFLLSQSLFKEEFKGENETEILVKSGEKAFWVSLPFGVKIPRVDEQILYQTTYVSSGNSADGVANVASLTEDYKLS PPRILECTPIQVRNYFQNTNKSSFDCIIRGRVLQVKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59217; Mature: 59217
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNLFFFLCFTAQPVFSTNVIFLPGKVEGNLPATLERIDDRSREISKFGAFYANLLLRA CCHHHEEHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVNTIEKIKDKEIFNKFRNSHFRKEDFAKICSEFTADFLVRDEVGFQNSISLDRIVYNCA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHH QKQLDEFHLSEKSDLFFLMRSMTERSFPWVPSKRKQTATSIWKKSTKELIFIVDLSPSFQ HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHH REREEWAQFVKNASWDSMTGIRIVTFSEGKVSILPKVSSSAELRKQIGSLKSFGKSSLED HHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHH LSEALLRTRRSLIQSGNRIQGAQDIIILTNAKGKIPNHSLFSAVQGLQSSGYRVQLFTAP HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECC YFSISQTQFLKGIFPKEGFFEITYFKKISTLKDSKTLIFRGRQIYFTYSEVSPKRIPQES CCCCCHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEEEECCEEEEEECCCCCHHCCHHH FLNKVSYSGKYTESESINPLNFTNIYAELTGDKILASDSLQDNLSFLLSQSLFKEEFKGE HHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCC NETEILVKSGEKAFWVSLPFGVKIPRVDEQILYQTTYVSSGNSADGVANVASLTEDYKLS CCCEEEEECCCEEEEEECCCCCCCCCCCHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCC PPRILECTPIQVRNYFQNTNKSSFDCIIRGRVLQVKGL CCCEEECCHHHHHHHHHCCCCCCCEEEEECEEEEEECC >Mature Secondary Structure MLRNLFFFLCFTAQPVFSTNVIFLPGKVEGNLPATLERIDDRSREISKFGAFYANLLLRA CCHHHEEHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVNTIEKIKDKEIFNKFRNSHFRKEDFAKICSEFTADFLVRDEVGFQNSISLDRIVYNCA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHH QKQLDEFHLSEKSDLFFLMRSMTERSFPWVPSKRKQTATSIWKKSTKELIFIVDLSPSFQ HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHH REREEWAQFVKNASWDSMTGIRIVTFSEGKVSILPKVSSSAELRKQIGSLKSFGKSSLED HHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHH LSEALLRTRRSLIQSGNRIQGAQDIIILTNAKGKIPNHSLFSAVQGLQSSGYRVQLFTAP HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECC YFSISQTQFLKGIFPKEGFFEITYFKKISTLKDSKTLIFRGRQIYFTYSEVSPKRIPQES CCCCCHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEEEECCEEEEEECCCCCHHCCHHH FLNKVSYSGKYTESESINPLNFTNIYAELTGDKILASDSLQDNLSFLLSQSLFKEEFKGE HHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCC NETEILVKSGEKAFWVSLPFGVKIPRVDEQILYQTTYVSSGNSADGVANVASLTEDYKLS CCCEEEEECCCEEEEEECCCCCCCCCCCHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCC PPRILECTPIQVRNYFQNTNKSSFDCIIRGRVLQVKGL CCCEEECCHHHHHHHHHCCCCCCCEEEEECEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA