Click here to switch to the map view.

The map label for this gene is 116249455

Identifier: 116249455

GI number: 116249455

Start: 866954

End: 867706

Strand: Direct

Name: 116249455

Synonym: pRL120794

Alternate gene names: NA

Gene position: 866954-867706 (Clockwise)

Preceding gene: 116249447

Following gene: 116249456

Centisome position: 99.65

GC content: 60.29

Gene sequence:

>753_bases
ATGAAAGTCACGGTTGTGGGAGCAAGCGGTCTCATCGGAACGCGGCTCAGCGAGAAGTTGCGCCGATCGGGCCACGACGT
CGCGGCCGCATCATTGTCGCTTGGCGTCGACACGGTTACCGGCAAGGGACTGGACGTGGTGATGGCGGGAACCGAAGTCG
TTGTGGACGTGACGAATGCCGCATCGTTTGGTGACAGTTCGGCGTTCGATTTCTTCAAGGCGTCGACGAAGAACTTGCTC
GCAGCTGCGGCGGAAGCCGGCATCAGGCACTATCTCGCACTCTCGGTCGTTGGCACGCCGCACCTCGTGGAGAGTGACTA
TTTTCGCGCGAAAATGGTGCAGGAAAATCTCATCCGGGCTTCAGGCCGACCCTATACGATCCTCCGCTCCACGCAATTTT
ACGAGTTCATAAACGGGTTGATCGACATCGGGGCTGAAGGCAATGTCTTTCGGTTGCCATCGGCCTTCATGAGGCCGGTC
GCAGCCGGGGATGTCGCCGCATTCCTGGCGGAACTGGCAGCCGGCGCTCCTTCGGGCGATGTCGTCGAAATCGGCGGCCC
GGAGCAGTTCGGCATCGATGAAATCGCCCGGATCTATCTCGCCGCGAACGAAGACGAACGGCAGGTGATAACCGATCAAT
CCACGTCGTATTTCGGAGTCGAACTGACCGACGACGCCCTCATTCCCGGCGCCGGTGCGCGCATGGCGCGACAGACGCTT
TCCGACTGGCTCAACCAATCGATGGGGGAGTAG

Upstream 100 bases:

>100_bases
TAGGGCGCCAGACCTCAGGCACGATGGAAGGCGTCCGGCTTTCCGGTCATTGTCGATCCGCGTGAGGCATTGCAGAAGAC
ATGCAGCAGAGGATGCCGAT

Downstream 100 bases:

>100_bases
GCCGTGCGGCTTTTCTTCCGGCCGGTTGGAGACTTAAGATCGACCCGCCACAGAACGTTCATCTGGCTGCGATTAGAACC
CTCAAAGGCTCACCGCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Secreted Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NmrA-Like; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; GCN5-Related N-Acetyltransferase; Transcriptional Regulator LysR-Family; LysR Family Transcriptional Regulator; NmrA-Like Protein; Nmra-Like Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKVTVVGASGLIGTRLSEKLRRSGHDVAAASLSLGVDTVTGKGLDVVMAGTEVVVDVTNAASFGDSSAFDFFKASTKNLL
AAAAEAGIRHYLALSVVGTPHLVESDYFRAKMVQENLIRASGRPYTILRSTQFYEFINGLIDIGAEGNVFRLPSAFMRPV
AAGDVAAFLAELAAGAPSGDVVEIGGPEQFGIDEIARIYLAANEDERQVITDQSTSYFGVELTDDALIPGAGARMARQTL
SDWLNQSMGE

Sequences:

>Translated_250_residues
MKVTVVGASGLIGTRLSEKLRRSGHDVAAASLSLGVDTVTGKGLDVVMAGTEVVVDVTNAASFGDSSAFDFFKASTKNLL
AAAAEAGIRHYLALSVVGTPHLVESDYFRAKMVQENLIRASGRPYTILRSTQFYEFINGLIDIGAEGNVFRLPSAFMRPV
AAGDVAAFLAELAAGAPSGDVVEIGGPEQFGIDEIARIYLAANEDERQVITDQSTSYFGVELTDDALIPGAGARMARQTL
SDWLNQSMGE
>Mature_250_residues
MKVTVVGASGLIGTRLSEKLRRSGHDVAAASLSLGVDTVTGKGLDVVMAGTEVVVDVTNAASFGDSSAFDFFKASTKNLL
AAAAEAGIRHYLALSVVGTPHLVESDYFRAKMVQENLIRASGRPYTILRSTQFYEFINGLIDIGAEGNVFRLPSAFMRPV
AAGDVAAFLAELAAGAPSGDVVEIGGPEQFGIDEIARIYLAANEDERQVITDQSTSYFGVELTDDALIPGAGARMARQTL
SDWLNQSMGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26411; Mature: 26411

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTVVGASGLIGTRLSEKLRRSGHDVAAASLSLGVDTVTGKGLDVVMAGTEVVVDVTNA
CEEEEEECCCCHHHHHHHHHHHCCCCCEEHHHHCCCEEECCCCEEEEEECCEEEEEECCC
ASFGDSSAFDFFKASTKNLLAAAAEAGIRHYLALSVVGTPHLVESDYFRAKMVQENLIRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHC
SGRPYTILRSTQFYEFINGLIDIGAEGNVFRLPSAFMRPVAAGDVAAFLAELAAGAPSGD
CCCCEEEEECHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCHHHHHHHHHHHCCCCCCC
VVEIGGPEQFGIDEIARIYLAANEDERQVITDQSTSYFGVELTDDALIPGAGARMARQTL
EEECCCCCCCCHHHHHHEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHH
SDWLNQSMGE
HHHHHHHCCC
>Mature Secondary Structure
MKVTVVGASGLIGTRLSEKLRRSGHDVAAASLSLGVDTVTGKGLDVVMAGTEVVVDVTNA
CEEEEEECCCCHHHHHHHHHHHCCCCCEEHHHHCCCEEECCCCEEEEEECCEEEEEECCC
ASFGDSSAFDFFKASTKNLLAAAAEAGIRHYLALSVVGTPHLVESDYFRAKMVQENLIRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHC
SGRPYTILRSTQFYEFINGLIDIGAEGNVFRLPSAFMRPVAAGDVAAFLAELAAGAPSGD
CCCCEEEEECHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCHHHHHHHHHHHCCCCCCC
VVEIGGPEQFGIDEIARIYLAANEDERQVITDQSTSYFGVELTDDALIPGAGARMARQTL
EEECCCCCCCCHHHHHHEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHH
SDWLNQSMGE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA