| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249414
Identifier: 116249414
GI number: 116249414
Start: 819045
End: 819830
Strand: Direct
Name: 116249414
Synonym: pRL120752
Alternate gene names: NA
Gene position: 819045-819830 (Clockwise)
Preceding gene: 116249413
Following gene: 116249415
Centisome position: 94.14
GC content: 64.12
Gene sequence:
>786_bases ATGTATAATCTCAGCCCGCACATTCGTGGCCTGTGGGACGCGCTGTTTGCGCTGGTCAGCGTGCATTCCGGCGTCGAGCT CGAAATCATCGCTCATGCAGCACCGGCGCCGCTGGCGGAGCTATGGGCGAGGCCGGACATGGGAGCGGTCTTTATGTGCG GCTATCCGTTTTCGCGCATGCCCGAGGGTGCGAGACCGGTTGCCCTTGCCGCACCCGTCTCGAGCGAGGCATGGACTTTG GACCAGCCGCTCTATGCCAGTCACATCCTGGTCGCCTCCACCGGGCCGGTGAACGCGGTGGCGGATCTCGCTGCGGCACG CTGGGGCTGGACCGTGCGCGATTCCCAATCGGGCTACCATGCGGCGCGCTCCTACCTTGCCGGCCGATTTGCGGGCACGA TGAAGCAGAGCACGACGGTCGGACCGCTGCTCAATCCCTCAGGCATCGTCGCAGCCCTCAAGGAGGGCAGGATCGATGCG GGCGCGATCGACGCTTATGCCTTCCAATTGTTGTCGCTGCACGAACGCGACGCGATCGATGGTCTTCGTATTCTGGCGAC GACCGATCCGCTTCCCGCTCCGCTATTGGTTGCCGCGCAAACATTGCCCTCGGACATCGCCACGGCGTTACAGCAGAGCC TCGTGACGTTGCATGAAACGCCTGAGGGAGCGGCGGCTTTGGAACGGCTCGGCCTCAGGCGATTTTCGGCGGTCGCTCCG TCGGCCTACGATGTCCTGCCGCAGAGAGCCGACGACGCCGATCGCAGATTGGGGATCTCATGGTAG
Upstream 100 bases:
>100_bases GCGCCGCCATGGTCGATAAGGCAAGAGAGATGAATATCGGCCAGCGCCTGCGGTTCGCATAATTGCCATGGTGATGTCCA AGCCAATCGCCTGTTCGAGA
Downstream 100 bases:
>100_bases ACAGGCGAACGAGCGCTCGGACGCGGAGGTCTCGATGATGAAATGGGTCCCTAAACACCTCGACCGGCTATTCGAAGCGC TGTTGGAGCACCTGTATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRMPEGARPVALAAPVSSEAWTL DQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYHAARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDA GAIDAYAFQLLSLHERDAIDGLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP SAYDVLPQRADDADRRLGISW
Sequences:
>Translated_261_residues MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRMPEGARPVALAAPVSSEAWTL DQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYHAARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDA GAIDAYAFQLLSLHERDAIDGLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP SAYDVLPQRADDADRRLGISW >Mature_261_residues MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRMPEGARPVALAAPVSSEAWTL DQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYHAARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDA GAIDAYAFQLLSLHERDAIDGLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP SAYDVLPQRADDADRRLGISW
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27751; Mature: 27751
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRM CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCHHHC PEGARPVALAAPVSSEAWTLDQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYH CCCCCCEEEECCCCCCCEECCCCHHHCEEEEECCCCHHHHHHHHHHHCCCEEECCCCHHH AARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDAGAIDAYAFQLLSLHERDAID HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC GLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP CEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC SAYDVLPQRADDADRRLGISW HHHHHCCCCCCCHHHHCCCCC >Mature Secondary Structure MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRM CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCHHHC PEGARPVALAAPVSSEAWTLDQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYH CCCCCCEEEECCCCCCCEECCCCHHHCEEEEECCCCHHHHHHHHHHHCCCEEECCCCHHH AARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDAGAIDAYAFQLLSLHERDAID HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC GLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP CEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC SAYDVLPQRADDADRRLGISW HHHHHCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA