Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116249414

Identifier: 116249414

GI number: 116249414

Start: 819045

End: 819830

Strand: Direct

Name: 116249414

Synonym: pRL120752

Alternate gene names: NA

Gene position: 819045-819830 (Clockwise)

Preceding gene: 116249413

Following gene: 116249415

Centisome position: 94.14

GC content: 64.12

Gene sequence:

>786_bases
ATGTATAATCTCAGCCCGCACATTCGTGGCCTGTGGGACGCGCTGTTTGCGCTGGTCAGCGTGCATTCCGGCGTCGAGCT
CGAAATCATCGCTCATGCAGCACCGGCGCCGCTGGCGGAGCTATGGGCGAGGCCGGACATGGGAGCGGTCTTTATGTGCG
GCTATCCGTTTTCGCGCATGCCCGAGGGTGCGAGACCGGTTGCCCTTGCCGCACCCGTCTCGAGCGAGGCATGGACTTTG
GACCAGCCGCTCTATGCCAGTCACATCCTGGTCGCCTCCACCGGGCCGGTGAACGCGGTGGCGGATCTCGCTGCGGCACG
CTGGGGCTGGACCGTGCGCGATTCCCAATCGGGCTACCATGCGGCGCGCTCCTACCTTGCCGGCCGATTTGCGGGCACGA
TGAAGCAGAGCACGACGGTCGGACCGCTGCTCAATCCCTCAGGCATCGTCGCAGCCCTCAAGGAGGGCAGGATCGATGCG
GGCGCGATCGACGCTTATGCCTTCCAATTGTTGTCGCTGCACGAACGCGACGCGATCGATGGTCTTCGTATTCTGGCGAC
GACCGATCCGCTTCCCGCTCCGCTATTGGTTGCCGCGCAAACATTGCCCTCGGACATCGCCACGGCGTTACAGCAGAGCC
TCGTGACGTTGCATGAAACGCCTGAGGGAGCGGCGGCTTTGGAACGGCTCGGCCTCAGGCGATTTTCGGCGGTCGCTCCG
TCGGCCTACGATGTCCTGCCGCAGAGAGCCGACGACGCCGATCGCAGATTGGGGATCTCATGGTAG

Upstream 100 bases:

>100_bases
GCGCCGCCATGGTCGATAAGGCAAGAGAGATGAATATCGGCCAGCGCCTGCGGTTCGCATAATTGCCATGGTGATGTCCA
AGCCAATCGCCTGTTCGAGA

Downstream 100 bases:

>100_bases
ACAGGCGAACGAGCGCTCGGACGCGGAGGTCTCGATGATGAAATGGGTCCCTAAACACCTCGACCGGCTATTCGAAGCGC
TGTTGGAGCACCTGTATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRMPEGARPVALAAPVSSEAWTL
DQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYHAARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDA
GAIDAYAFQLLSLHERDAIDGLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP
SAYDVLPQRADDADRRLGISW

Sequences:

>Translated_261_residues
MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRMPEGARPVALAAPVSSEAWTL
DQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYHAARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDA
GAIDAYAFQLLSLHERDAIDGLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP
SAYDVLPQRADDADRRLGISW
>Mature_261_residues
MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRMPEGARPVALAAPVSSEAWTL
DQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYHAARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDA
GAIDAYAFQLLSLHERDAIDGLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP
SAYDVLPQRADDADRRLGISW

Specific function: Unknown

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27751; Mature: 27751

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRM
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCHHHC
PEGARPVALAAPVSSEAWTLDQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYH
CCCCCCEEEECCCCCCCEECCCCHHHCEEEEECCCCHHHHHHHHHHHCCCEEECCCCHHH
AARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDAGAIDAYAFQLLSLHERDAID
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
GLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP
CEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
SAYDVLPQRADDADRRLGISW
HHHHHCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MYNLSPHIRGLWDALFALVSVHSGVELEIIAHAAPAPLAELWARPDMGAVFMCGYPFSRM
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCHHHC
PEGARPVALAAPVSSEAWTLDQPLYASHILVASTGPVNAVADLAAARWGWTVRDSQSGYH
CCCCCCEEEECCCCCCCEECCCCHHHCEEEEECCCCHHHHHHHHHHHCCCEEECCCCHHH
AARSYLAGRFAGTMKQSTTVGPLLNPSGIVAALKEGRIDAGAIDAYAFQLLSLHERDAID
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
GLRILATTDPLPAPLLVAAQTLPSDIATALQQSLVTLHETPEGAAALERLGLRRFSAVAP
CEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
SAYDVLPQRADDADRRLGISW
HHHHHCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA