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The map label for this gene is osmF [H]

Identifier: 116249412

GI number: 116249412

Start: 816952

End: 817884

Strand: Direct

Name: osmF [H]

Synonym: pRL120750

Alternate gene names: 116249412

Gene position: 816952-817884 (Clockwise)

Preceding gene: 116249411

Following gene: 116249413

Centisome position: 93.9

GC content: 57.23

Gene sequence:

>933_bases
ATGCCGTCAGTCCGTTCATTGAAAAGTCAACAAGAGGGAATGACTATGAAAAATTGGACAAAAGGCATCTTTGCAGCCGG
CATCATGGCAGCCGCCATGTTCCAGTCTGCATCCGCAGAGACCATCAAGGTCGGCAGCAAGAATTTCACCGAGCAGTTTA
TCCTCGCCGAAATGTACGCCGCCGTTTTGGAAAATGCCGGCATCACCGTCGAGCGCAAGATCAATCTCGGCGGCACGCTG
ATTGCTCACCAGGCATTGGTGGCCGGCGAGATCGATCTCTATCCGGAATATACCGGCACGGCGCTCGCTTCTGTCGTCAA
GGGTGAGATGTCGACCGATGCCGAGAAGGTCTACACGCAGGTCAAGGACTTCTACGCCAAGCAGTTCAACCTCACCTGGC
TGAAGCCGAGCGGCATCAACAATGGCTATGTCATCGTGGTCCGGCAGGAAACGGCGCAGGCCAACAATCTGAAGAGCCTG
TCGGATCTCGCCAAGGTTTCGAAGACCCTGGTCTTCGGCGGCGGCGCTGAATTTCCGGACCGCGCCGACGGCCTGCCCGG
CCTGAAGCGTGTTTATGATGCCGAGTTCAAGGAGTTCAAGCAGTTTGCCAAGCTCGGCCTTCGTTATGATGCGCTGGAAC
AGAAGGACATTGACGTCGCCAATGGCGCCGCGACCGACTGGCAGATCGGCTCGAAGAATCTCGTGCCGCTGGCAGACGAC
AAGGGTCTGTTTCCGCCCTACTACGTGGCGCCCGTTGTCCGCCAGGACGTGCTGAAGGCCAATCCGAAAGTTGCCGAACT
GCTGGAGGCGGTCGGCACCCATCTCGATAACGAGAAAATGCGGGTCCTCAATGCCAAGGTTGAGACCGATCACGAGGAAG
CCAAGGATGTGGCGGTCGAATTCCTCAAGGAAAACGGCCTGCTGCCGAAGTGA

Upstream 100 bases:

>100_bases
TGCCGCATTGATCGGGCTTGGCCCGCAATAAGCCGGTTCGCCACTGCCCCGGCAAGAAGGGCAGGGCGCCGACCGGTCAT
GCTGACGGTTATTCCGGGGA

Downstream 100 bases:

>100_bases
TTGTCACGCCCGCGGCCGGGTATCGATCCGGCCGCGACCTGGCGTGGCGATCCTTTTAGGTGTCTGTTCGAAAATCCGTC
CGTTCAGCAGCCGGACAGGA

Product: putative ABC transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPSVRSLKSQQEGMTMKNWTKGIFAAGIMAAAMFQSASAETIKVGSKNFTEQFILAEMYAAVLENAGITVERKINLGGTL
IAHQALVAGEIDLYPEYTGTALASVVKGEMSTDAEKVYTQVKDFYAKQFNLTWLKPSGINNGYVIVVRQETAQANNLKSL
SDLAKVSKTLVFGGGAEFPDRADGLPGLKRVYDAEFKEFKQFAKLGLRYDALEQKDIDVANGAATDWQIGSKNLVPLADD
KGLFPPYYVAPVVRQDVLKANPKVAELLEAVGTHLDNEKMRVLNAKVETDHEEAKDVAVEFLKENGLLPK

Sequences:

>Translated_310_residues
MPSVRSLKSQQEGMTMKNWTKGIFAAGIMAAAMFQSASAETIKVGSKNFTEQFILAEMYAAVLENAGITVERKINLGGTL
IAHQALVAGEIDLYPEYTGTALASVVKGEMSTDAEKVYTQVKDFYAKQFNLTWLKPSGINNGYVIVVRQETAQANNLKSL
SDLAKVSKTLVFGGGAEFPDRADGLPGLKRVYDAEFKEFKQFAKLGLRYDALEQKDIDVANGAATDWQIGSKNLVPLADD
KGLFPPYYVAPVVRQDVLKANPKVAELLEAVGTHLDNEKMRVLNAKVETDHEEAKDVAVEFLKENGLLPK
>Mature_309_residues
PSVRSLKSQQEGMTMKNWTKGIFAAGIMAAAMFQSASAETIKVGSKNFTEQFILAEMYAAVLENAGITVERKINLGGTLI
AHQALVAGEIDLYPEYTGTALASVVKGEMSTDAEKVYTQVKDFYAKQFNLTWLKPSGINNGYVIVVRQETAQANNLKSLS
DLAKVSKTLVFGGGAEFPDRADGLPGLKRVYDAEFKEFKQFAKLGLRYDALEQKDIDVANGAATDWQIGSKNLVPLADDK
GLFPPYYVAPVVRQDVLKANPKVAELLEAVGTHLDNEKMRVLNAKVETDHEEAKDVAVEFLKENGLLPK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=291, Percent_Identity=33.3333333333333, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33914; Mature: 33783

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVRSLKSQQEGMTMKNWTKGIFAAGIMAAAMFQSASAETIKVGSKNFTEQFILAEMYA
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHH
AVLENAGITVERKINLGGTLIAHQALVAGEIDLYPEYTGTALASVVKGEMSTDAEKVYTQ
HHHHCCCCEEEEEECCCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHH
VKDFYAKQFNLTWLKPSGINNGYVIVVRQETAQANNLKSLSDLAKVSKTLVFGGGAEFPD
HHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHEEECCCCCCCC
RADGLPGLKRVYDAEFKEFKQFAKLGLRYDALEQKDIDVANGAATDWQIGSKNLVPLADD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGLFPPYYVAPVVRQDVLKANPKVAELLEAVGTHLDNEKMRVLNAKVETDHEEAKDVAVE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECHHCCCHHHHHHHHHH
FLKENGLLPK
HHHHCCCCCC
>Mature Secondary Structure 
PSVRSLKSQQEGMTMKNWTKGIFAAGIMAAAMFQSASAETIKVGSKNFTEQFILAEMYA
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHH
AVLENAGITVERKINLGGTLIAHQALVAGEIDLYPEYTGTALASVVKGEMSTDAEKVYTQ
HHHHCCCCEEEEEECCCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHH
VKDFYAKQFNLTWLKPSGINNGYVIVVRQETAQANNLKSLSDLAKVSKTLVFGGGAEFPD
HHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHEEECCCCCCCC
RADGLPGLKRVYDAEFKEFKQFAKLGLRYDALEQKDIDVANGAATDWQIGSKNLVPLADD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGLFPPYYVAPVVRQDVLKANPKVAELLEAVGTHLDNEKMRVLNAKVETDHEEAKDVAVE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECHHCCCHHHHHHHHHH
FLKENGLLPK
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]