| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249409
Identifier: 116249409
GI number: 116249409
Start: 813765
End: 814616
Strand: Direct
Name: 116249409
Synonym: pRL120747
Alternate gene names: NA
Gene position: 813765-814616 (Clockwise)
Preceding gene: 116249408
Following gene: 116249410
Centisome position: 93.53
GC content: 62.21
Gene sequence:
>852_bases GTGACGCTGTCGGCCCAATCCATCCTCGACTTTCCGGTGCCGCAAGCGACACATGTGGTTACCGCCAGGGATGCCATCCT TTACGCCCTCTCGACTGGCTACGGCACCGACGCGCCCGACAAAAAGACATTGAAGTATGTCTATGAACGCGATCTCGTGA CCGCGCCGACCCTTGCCAATATCGTGGCGCATCCAGGCCCATGGATGCAGCAGACGGGCGTCGACTGGACGCGTCTGGTG CATTCCGAACATCGCCTGACGATCCACCGGCCGGTTCCCCTCGATGTGCCGCTGATCTCCCGGTCGCGCGTCTTGTCGGT GGTCGACCGCGGCGTTGAGAAAGGAATGTTCGTCAGCTTCGAACGCCTGATCGCAACCGTGGACGGTGATGAGCCAATCG CGACCATCGTCCAGACCAATGCGTGCCGCGGCGACGGTGGATGCGGCTCAGTGGGATCTGCGCCCGAACCCTTGCCGAAA GTCCCGGACAGAGAGCCGGACCTTGAATTCAATGTCGACATCCCTGACAACGCCGCACTGCTATATCGCCTGAACGGCGA TCTCAATCCGCTGCACGTCGACCCGCAGGCAGCCGGCAGGAGCGGCTTTGACCGACCGATCCTGCATGGGCTCTGCAGCT TCGGTTATGCGGGCTACGCCATTGTCGCTGCCATCGATCCAAGCATGGGCAGCGGCTTGAGCGCGATTGCGGCGCGTTTC AGCGCGCCGATCTTTCCCGGCGAAACGATCACCGTGCAGATATGGCGCAACGACGCCGAGATTCGCTTCCGAGGCCTCGT TGCTGCGCGCGGCGCGACCATCCTCGACAATGGCATGGCGAGGTTGTCATGA
Upstream 100 bases:
>100_bases AGGGGGCAGACTTCGTCACCGGCGAATTGCTTTCCGTTGACGGCGGCATCCGCCTGTCCGGTGGCGCTCGCAAACCCGCG GCATCCGGGGGAGCCGCATC
Downstream 100 bases:
>100_bases CGAAAGCGGTCAAGCCGGCCGCCGGCGAGGCGCGCCATTATATCAGGATCAAGGAGCAGATCCTGGCCGAGATCGCCGAG GGCAAGCTGCAGCCGGGAGA
Product: putative MaoC like dehydratase/enoyl-CoA hydratase
Products: NA
Alternate protein names: Dehydratase; MaoC-Like Dehydratase; Dehydrogenase; Acyl Dehydratase; UfaA2 Protein; MaoC-Like Domain-Containing; Enoyl-CoA Hydratase; Short-Chain Dehydrogenase/Reductase SDR; MaoC Family Protein; Hydratase; -Specific Enoyl-CoA Hydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Acyl Dehydratase; MaoC Domain Protein Dehydratase; MaoC Family Dehydratase; Multifunctional; Enoyl-CoA Hydratase/3-Hydroxyacyl-CoA Dehydratase; MaoC Like Dehydratase/Enoyl-CoA Hydratase; MaoC-Like-Specific Enoyl-CoA Hydratase; MaoC-Like Domain-Containing Protein; MaoC Family Dehydrogenase/Dehydratase; MaoC Like Domain Protein
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLANIVAHPGPWMQQTGVDWTRLV HSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSFERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPK VPDREPDLEFNVDIPDNAALLYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS
Sequences:
>Translated_283_residues MTLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLANIVAHPGPWMQQTGVDWTRLV HSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSFERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPK VPDREPDLEFNVDIPDNAALLYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS >Mature_282_residues TLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLANIVAHPGPWMQQTGVDWTRLVH SEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSFERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPKV PDREPDLEFNVDIPDNAALLYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARFS APIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504505, Length=281, Percent_Identity=30.9608540925267, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17532783, Length=274, Percent_Identity=34.6715328467153, Blast_Score=141, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6322861, Length=287, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI18859837, Length=275, Percent_Identity=29.8181818181818, Blast_Score=136, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30447; Mature: 30316
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLAN CCCCCCHHHCCCCCCCEEEEEEHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHH IVAHPGPWMQQTGVDWTRLVHSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSF HHCCCCCCHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHEEE ERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPKVPDREPDLEFNVDIPDNAAL EHHEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE LYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF EEEECCCCCEEEECHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHH SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS CCCCCCCCEEEEEEECCCCEEEEEEEEEECCCEEECCCHHHCC >Mature Secondary Structure TLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLAN CCCCCHHHCCCCCCCEEEEEEHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHH IVAHPGPWMQQTGVDWTRLVHSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSF HHCCCCCCHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHEEE ERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPKVPDREPDLEFNVDIPDNAAL EHHEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE LYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF EEEECCCCCEEEECHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHH SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS CCCCCCCCEEEEEEECCCCEEEEEEEEEECCCEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA