Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

Click here to switch to the map view.

The map label for this gene is 116249409

Identifier: 116249409

GI number: 116249409

Start: 813765

End: 814616

Strand: Direct

Name: 116249409

Synonym: pRL120747

Alternate gene names: NA

Gene position: 813765-814616 (Clockwise)

Preceding gene: 116249408

Following gene: 116249410

Centisome position: 93.53

GC content: 62.21

Gene sequence:

>852_bases
GTGACGCTGTCGGCCCAATCCATCCTCGACTTTCCGGTGCCGCAAGCGACACATGTGGTTACCGCCAGGGATGCCATCCT
TTACGCCCTCTCGACTGGCTACGGCACCGACGCGCCCGACAAAAAGACATTGAAGTATGTCTATGAACGCGATCTCGTGA
CCGCGCCGACCCTTGCCAATATCGTGGCGCATCCAGGCCCATGGATGCAGCAGACGGGCGTCGACTGGACGCGTCTGGTG
CATTCCGAACATCGCCTGACGATCCACCGGCCGGTTCCCCTCGATGTGCCGCTGATCTCCCGGTCGCGCGTCTTGTCGGT
GGTCGACCGCGGCGTTGAGAAAGGAATGTTCGTCAGCTTCGAACGCCTGATCGCAACCGTGGACGGTGATGAGCCAATCG
CGACCATCGTCCAGACCAATGCGTGCCGCGGCGACGGTGGATGCGGCTCAGTGGGATCTGCGCCCGAACCCTTGCCGAAA
GTCCCGGACAGAGAGCCGGACCTTGAATTCAATGTCGACATCCCTGACAACGCCGCACTGCTATATCGCCTGAACGGCGA
TCTCAATCCGCTGCACGTCGACCCGCAGGCAGCCGGCAGGAGCGGCTTTGACCGACCGATCCTGCATGGGCTCTGCAGCT
TCGGTTATGCGGGCTACGCCATTGTCGCTGCCATCGATCCAAGCATGGGCAGCGGCTTGAGCGCGATTGCGGCGCGTTTC
AGCGCGCCGATCTTTCCCGGCGAAACGATCACCGTGCAGATATGGCGCAACGACGCCGAGATTCGCTTCCGAGGCCTCGT
TGCTGCGCGCGGCGCGACCATCCTCGACAATGGCATGGCGAGGTTGTCATGA

Upstream 100 bases:

>100_bases
AGGGGGCAGACTTCGTCACCGGCGAATTGCTTTCCGTTGACGGCGGCATCCGCCTGTCCGGTGGCGCTCGCAAACCCGCG
GCATCCGGGGGAGCCGCATC

Downstream 100 bases:

>100_bases
CGAAAGCGGTCAAGCCGGCCGCCGGCGAGGCGCGCCATTATATCAGGATCAAGGAGCAGATCCTGGCCGAGATCGCCGAG
GGCAAGCTGCAGCCGGGAGA

Product: putative MaoC like dehydratase/enoyl-CoA hydratase

Products: NA

Alternate protein names: Dehydratase; MaoC-Like Dehydratase; Dehydrogenase; Acyl Dehydratase; UfaA2 Protein; MaoC-Like Domain-Containing; Enoyl-CoA Hydratase; Short-Chain Dehydrogenase/Reductase SDR; MaoC Family Protein; Hydratase; -Specific Enoyl-CoA Hydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Acyl Dehydratase; MaoC Domain Protein Dehydratase; MaoC Family Dehydratase; Multifunctional; Enoyl-CoA Hydratase/3-Hydroxyacyl-CoA Dehydratase; MaoC Like Dehydratase/Enoyl-CoA Hydratase; MaoC-Like-Specific Enoyl-CoA Hydratase; MaoC-Like Domain-Containing Protein; MaoC Family Dehydrogenase/Dehydratase; MaoC Like Domain Protein

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLANIVAHPGPWMQQTGVDWTRLV
HSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSFERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPK
VPDREPDLEFNVDIPDNAALLYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF
SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS

Sequences:

>Translated_283_residues
MTLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLANIVAHPGPWMQQTGVDWTRLV
HSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSFERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPK
VPDREPDLEFNVDIPDNAALLYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF
SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS
>Mature_282_residues
TLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLANIVAHPGPWMQQTGVDWTRLVH
SEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSFERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPKV
PDREPDLEFNVDIPDNAALLYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARFS
APIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4504505, Length=281, Percent_Identity=30.9608540925267, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17532783, Length=274, Percent_Identity=34.6715328467153, Blast_Score=141, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6322861, Length=287, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=2e-26,
Organism=Drosophila melanogaster, GI18859837, Length=275, Percent_Identity=29.8181818181818, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30447; Mature: 30316

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLAN
CCCCCCHHHCCCCCCCEEEEEEHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHH
IVAHPGPWMQQTGVDWTRLVHSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSF
HHCCCCCCHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHEEE
ERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPKVPDREPDLEFNVDIPDNAAL
EHHEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE
LYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF
EEEECCCCCEEEECHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHH
SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS
CCCCCCCCEEEEEEECCCCEEEEEEEEEECCCEEECCCHHHCC
>Mature Secondary Structure 
TLSAQSILDFPVPQATHVVTARDAILYALSTGYGTDAPDKKTLKYVYERDLVTAPTLAN
CCCCCHHHCCCCCCCEEEEEEHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHH
IVAHPGPWMQQTGVDWTRLVHSEHRLTIHRPVPLDVPLISRSRVLSVVDRGVEKGMFVSF
HHCCCCCCHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHEEE
ERLIATVDGDEPIATIVQTNACRGDGGCGSVGSAPEPLPKVPDREPDLEFNVDIPDNAAL
EHHEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE
LYRLNGDLNPLHVDPQAAGRSGFDRPILHGLCSFGYAGYAIVAAIDPSMGSGLSAIAARF
EEEECCCCCEEEECHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHH
SAPIFPGETITVQIWRNDAEIRFRGLVAARGATILDNGMARLS
CCCCCCCCEEEEEEECCCCEEEEEEEEEECCCEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA