Click here to switch to the map view.

The map label for this gene is sam [H]

Identifier: 116249404

GI number: 116249404

Start: 808225

End: 809172

Strand: Reverse

Name: sam [H]

Synonym: pRL120742

Alternate gene names: 116249404

Gene position: 809172-808225 (Counterclockwise)

Preceding gene: 116249405

Following gene: 116249403

Centisome position: 93.01

GC content: 60.97

Gene sequence:

>948_bases
ATGCGCGGCTGCTTTGCGAGGATGCGAGAGATGACGACCAAGACTGGCGTAGCCAATGCCGGAAACCTGATCATGACTGG
CGTTGTGCTGATGCTGCTCGGCGATCTGCTCTTTGCGCTGAACGATGCTATGGGCAAATGGCTGGTTGCGAGCTTTGCCG
TCGGCCAGGTGCTGGTGATCCGCTCTGTCGGCGCTTTCATCGTGCTCGGACCAATGATCCTCCGGCAAGGGCCGATGGCC
TTGTTCCGCGTCGAGCAAAAGGGCCTGCAGTTCATCCGTGTTTTGATGGCGACCTGCGATGTCGCGCTGTTTTACGCTGC
CGTCGCCTATCTGCCGCTCGCAGACGTCATGACCTTCTATATGGCCGGACCGATCTATATTGCGGCGCTTTCGCATTTCT
TTCTCGGAGAGAAGATCGGCTGGCGCCGTTGGCTCGCCGTTCTGATCGGCTTTGCCGGCGTCGTCATCGCGCTGCGTCCG
TCCACGGCGATGCTGTCGCTTCCATCGCTCTTCGGTCTTGCCGGCAGCCTTGCCTTTGCGCTGTCGCTGGTGATGAGCCG
CTATCTACGCTCGACCAGCGACACGACGCTGGTGACGTGGCAGACGATCGCCGCGCTCGTCACCGGCATCGTCTTGAGCA
TCGGTCACTGGCAGCCGGCAACGCTCATCGACTGGTCCGGCATGCTGCTGCTCGGCATCGTTGCCACCTGCGCGCATCTG
CTTATCACCCGCTCGCTGAAGCTCGCGCCGGCATCGCTGCTCGCGCCGCTGCAATATACGCTGCTGCTCTGGGCGATCGT
CCTCGGATACCTCTTCTTCAACGATATTCCCGATACGCAGATCATCGTCGGCGCCGCAATCATCGTCGTTGCGGGGCTCT
TCATCTTCCACCGGAAGAACCTGAAAGAAACGGTTCCGGTCGAAGCCGTCCCGCCCGACGGCCATTGA

Upstream 100 bases:

>100_bases
GCGCTTTAGGTATGATCCACCGCGCCGGTGGTCTGCTTCACCGTATCATCGATGCGCTTGACATCGGCAGAGTTAAGGCA
GAAGCCGCACTCGGCCGCGC

Downstream 100 bases:

>100_bases
GGCTACAGCGCCTTATCTTTCGGGCTTTGCATAGGATGCTGCTGTAACTCCTGGAATTCCTGCATACTTCCATCCTTAAA
CCGTGCGGGAATACACCAAA

Product: putative transmembrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRGCFARMREMTTKTGVANAGNLIMTGVVLMLLGDLLFALNDAMGKWLVASFAVGQVLVIRSVGAFIVLGPMILRQGPMA
LFRVEQKGLQFIRVLMATCDVALFYAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLIGFAGVVIALRP
STAMLSLPSLFGLAGSLAFALSLVMSRYLRSTSDTTLVTWQTIAALVTGIVLSIGHWQPATLIDWSGMLLLGIVATCAHL
LITRSLKLAPASLLAPLQYTLLLWAIVLGYLFFNDIPDTQIIVGAAIIVVAGLFIFHRKNLKETVPVEAVPPDGH

Sequences:

>Translated_315_residues
MRGCFARMREMTTKTGVANAGNLIMTGVVLMLLGDLLFALNDAMGKWLVASFAVGQVLVIRSVGAFIVLGPMILRQGPMA
LFRVEQKGLQFIRVLMATCDVALFYAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLIGFAGVVIALRP
STAMLSLPSLFGLAGSLAFALSLVMSRYLRSTSDTTLVTWQTIAALVTGIVLSIGHWQPATLIDWSGMLLLGIVATCAHL
LITRSLKLAPASLLAPLQYTLLLWAIVLGYLFFNDIPDTQIIVGAAIIVVAGLFIFHRKNLKETVPVEAVPPDGH
>Mature_315_residues
MRGCFARMREMTTKTGVANAGNLIMTGVVLMLLGDLLFALNDAMGKWLVASFAVGQVLVIRSVGAFIVLGPMILRQGPMA
LFRVEQKGLQFIRVLMATCDVALFYAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRWLAVLIGFAGVVIALRP
STAMLSLPSLFGLAGSLAFALSLVMSRYLRSTSDTTLVTWQTIAALVTGIVLSIGHWQPATLIDWSGMLLLGIVATCAHL
LITRSLKLAPASLLAPLQYTLLLWAIVLGYLFFNDIPDTQIIVGAAIIVVAGLFIFHRKNLKETVPVEAVPPDGH

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34082; Mature: 34082

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGCFARMREMTTKTGVANAGNLIMTGVVLMLLGDLLFALNDAMGKWLVASFAVGQVLVI
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVGAFIVLGPMILRQGPMALFRVEQKGLQFIRVLMATCDVALFYAAVAYLPLADVMTFY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAGPIYIAALSHFFLGEKIGWRRWLAVLIGFAGVVIALRPSTAMLSLPSLFGLAGSLAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHH
LSLVMSRYLRSTSDTTLVTWQTIAALVTGIVLSIGHWQPATLIDWSGMLLLGIVATCAHL
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHH
LITRSLKLAPASLLAPLQYTLLLWAIVLGYLFFNDIPDTQIIVGAAIIVVAGLFIFHRKN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
LKETVPVEAVPPDGH
CHHHCCCCCCCCCCC
>Mature Secondary Structure
MRGCFARMREMTTKTGVANAGNLIMTGVVLMLLGDLLFALNDAMGKWLVASFAVGQVLVI
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVGAFIVLGPMILRQGPMALFRVEQKGLQFIRVLMATCDVALFYAAVAYLPLADVMTFY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAGPIYIAALSHFFLGEKIGWRRWLAVLIGFAGVVIALRPSTAMLSLPSLFGLAGSLAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHH
LSLVMSRYLRSTSDTTLVTWQTIAALVTGIVLSIGHWQPATLIDWSGMLLLGIVATCAHL
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHH
LITRSLKLAPASLLAPLQYTLLLWAIVLGYLFFNDIPDTQIIVGAAIIVVAGLFIFHRKN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
LKETVPVEAVPPDGH
CHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA