| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249398
Identifier: 116249398
GI number: 116249398
Start: 802417
End: 802923
Strand: Direct
Name: 116249398
Synonym: pRL120736
Alternate gene names: NA
Gene position: 802417-802923 (Clockwise)
Preceding gene: 116249397
Following gene: 116249400
Centisome position: 92.23
GC content: 61.93
Gene sequence:
>507_bases ATGTTCAAGGACGAACTCGGGGACACCGGCGCAAACAAGGATATGCGCGACGGTGTGGAAACCGCGCCGGCCTCCTTCGA AGAGGCGAGCATCAATCCTGATCTTATCAGACGTGAGGGTTTCGCCAGCGAGGCCGAATATCGGGCATATATTGCGACGC TCGGTGGTCACGCTTCCGTTGGAGACACCGTCGAGGAGCCTCTCCCGATCTACGAAGGTCATGTCCTGGAAGGCCGTCTG CAAGAACTGCGAGAAGAACTCGAAAACCTCCGCGCTCGCCTTCATGTGATCCAACATCAGGCCGCGACCGTCGTTACGGA GAACGTCCGATGGGCCGATGCCAGCGCCCATGCGCAGCTCGGCAATCAGCCTTGGCTCAAGCTGGCAGGTGCAATGGCGG CGGCCTTCGTCGTCACCAGGGGCATCATGCGGTTGCCTCTGGGAGCCGTGGCGACGACGGCGCTACCGTTGGTGGCGGCG GCGATGAACCGGAAGCTCGCCCGGTGA
Upstream 100 bases:
>100_bases AGCGTTTCAGCGCGTCGCAAAGATGAAGGCAGGAGCGGAGGCCGATGCATCCTTCTGAGCCGTCGAGCGTTCTATCGCCA GGAACAACTGGAGACACATC
Downstream 100 bases:
>100_bases AAGTCGTCAGCTTCGATGACTGTTCAGGCGAAGCCGATTTCCGCGAGCAGAGGCAGGTGGTCCGAGGCAATCCTTGTCAG GCGGTTTTCCAGGACCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MFKDELGDTGANKDMRDGVETAPASFEEASINPDLIRREGFASEAEYRAYIATLGGHASVGDTVEEPLPIYEGHVLEGRL QELREELENLRARLHVIQHQAATVVTENVRWADASAHAQLGNQPWLKLAGAMAAAFVVTRGIMRLPLGAVATTALPLVAA AMNRKLAR
Sequences:
>Translated_168_residues MFKDELGDTGANKDMRDGVETAPASFEEASINPDLIRREGFASEAEYRAYIATLGGHASVGDTVEEPLPIYEGHVLEGRL QELREELENLRARLHVIQHQAATVVTENVRWADASAHAQLGNQPWLKLAGAMAAAFVVTRGIMRLPLGAVATTALPLVAA AMNRKLAR >Mature_168_residues MFKDELGDTGANKDMRDGVETAPASFEEASINPDLIRREGFASEAEYRAYIATLGGHASVGDTVEEPLPIYEGHVLEGRL QELREELENLRARLHVIQHQAATVVTENVRWADASAHAQLGNQPWLKLAGAMAAAFVVTRGIMRLPLGAVATTALPLVAA AMNRKLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18213; Mature: 18213
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKDELGDTGANKDMRDGVETAPASFEEASINPDLIRREGFASEAEYRAYIATLGGHASV CCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC GDTVEEPLPIYEGHVLEGRLQELREELENLRARLHVIQHQAATVVTENVRWADASAHAQL CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC GNQPWLKLAGAMAAAFVVTRGIMRLPLGAVATTALPLVAAAMNRKLAR CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFKDELGDTGANKDMRDGVETAPASFEEASINPDLIRREGFASEAEYRAYIATLGGHASV CCCCCCCCCCCCCHHHHHHHHCCCCCHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC GDTVEEPLPIYEGHVLEGRLQELREELENLRARLHVIQHQAATVVTENVRWADASAHAQL CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC GNQPWLKLAGAMAAAFVVTRGIMRLPLGAVATTALPLVAAAMNRKLAR CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA