Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116249397

Identifier: 116249397

GI number: 116249397

Start: 801206

End: 802342

Strand: Direct

Name: 116249397

Synonym: pRL120735

Alternate gene names: NA

Gene position: 801206-802342 (Clockwise)

Preceding gene: 116249396

Following gene: 116249398

Centisome position: 92.09

GC content: 65.7

Gene sequence:

>1137_bases
ATGAACGCTTCCATCAAACCTTCGAAGGTCGTCGTCATCGGCGGCGGGATCTTTGGCGTCTCGACGGCTGTCCATCTGGC
CCGGCTCGGGGTCCGCACCGTGCTCATCAATGATGGCCCGCTTGCCAACGGCGCCTCTGGCCGTTCGCTCGCCTGGCTCA
ACTCGGCGCGCAAACGCACCGATGCCTATCACCGGCTGCGGTTGGCCGGCATAGATCGCTACCGCACGCTGGCCGTCCGG
TATCCCGATGCGCCGTGGCTGCGCTTCGACGGCGGCCTGACCTGGGATGCGGACGATGCCGGCAACGAGATCGCCGAAAT
CTTCGACTATGAGCGCGATCTCGGCTATCACGCGCAATGGCTCGCGCCGCAAAGAATTGCCGCGGCGACGCCGGGTGTCG
ATGCAAGTGTGGTGACGCGGCAAGGCGCGATCTTCAACCCCGGGGAGGGCTGGGTCGATCTTCCGTCCTTGATCGGCACG
CTCGTGAAAGAATTCCGTACGCTGGGTGGCGAGATCGTCACGGACGCGGGTCGCGCGATGGTCGATGTCGAAAGCGGGAG
CGCCCGTGGCGTGATCACGGCAGACGGCATGCGCCGGGATGCTGATGCCGTGCTGCTTGCTGCCGGCGGCGACGTTCCCG
CAATCGTGGCCGAGGCCGGCCAGCATATCGGCGATTCAACGCCTGTCGCCCTTCTCGTCAGGACCAAGCCGATCCGCCAT
CCGCTGAAGGCCGTGCTCAACACCCCTCGCGTCGCCATCCGGCCGACGCCCAACGGTGGCTTCGCGCTCGACGCCGCCTG
GTCCGAGGAAGAGGTGAGCGTGAAGCCCGACGGCAGCTATGATGTCAGGCAATCGACGCTGGAAGGATTGCTGCGCGAGG
CCTCCAGGGTTCTCGAAGGCAATCCGGTGCTGGAGGTCGAAGATTATGGTGTCGGCCCGAAGCCCATCCCTGGCGACGGC
GAGCCCGTCTTCGGCGAACTGCCATCGATCTCGGGTTATTTCGTCGCCTTCAGCCATAGCGGCGCCACCCTCGGCCTGAT
TGCCGGCGAACTGCTGGCGGACGAGATCGCCACCGGACACCGCCATCCGCTGCTGGCGGACTTTCGGCCGGAGCGTTTCA
GCGCGTCGCAAAGATGA

Upstream 100 bases:

>100_bases
CTGAAGCGCCTCAGGCAACGCATGGTGCTCCCGGTCGTCCTCACCCCGGGCGTGCCGGATTTCATTCGACCTAGCAAGAG
CAGAAAACAAGGTTATCGAC

Downstream 100 bases:

>100_bases
AGGCAGGAGCGGAGGCCGATGCATCCTTCTGAGCCGTCGAGCGTTCTATCGCCAGGAACAACTGGAGACACATCATGTTC
AAGGACGAACTCGGGGACAC

Product: putative D-amino acid oxidase

Products: NA

Alternate protein names: Fructosyl-Amino Acid Oxidase; D-Amino Acid Oxidase Protein; Oxidoreductase; Glycine/D-Amino Acid Oxidase Deaminating; D-Amino Acid Oxidase; Oxidase; Fructosyl Amino Acid Oxidase

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNASIKPSKVVVIGGGIFGVSTAVHLARLGVRTVLINDGPLANGASGRSLAWLNSARKRTDAYHRLRLAGIDRYRTLAVR
YPDAPWLRFDGGLTWDADDAGNEIAEIFDYERDLGYHAQWLAPQRIAAATPGVDASVVTRQGAIFNPGEGWVDLPSLIGT
LVKEFRTLGGEIVTDAGRAMVDVESGSARGVITADGMRRDADAVLLAAGGDVPAIVAEAGQHIGDSTPVALLVRTKPIRH
PLKAVLNTPRVAIRPTPNGGFALDAAWSEEEVSVKPDGSYDVRQSTLEGLLREASRVLEGNPVLEVEDYGVGPKPIPGDG
EPVFGELPSISGYFVAFSHSGATLGLIAGELLADEIATGHRHPLLADFRPERFSASQR

Sequences:

>Translated_378_residues
MNASIKPSKVVVIGGGIFGVSTAVHLARLGVRTVLINDGPLANGASGRSLAWLNSARKRTDAYHRLRLAGIDRYRTLAVR
YPDAPWLRFDGGLTWDADDAGNEIAEIFDYERDLGYHAQWLAPQRIAAATPGVDASVVTRQGAIFNPGEGWVDLPSLIGT
LVKEFRTLGGEIVTDAGRAMVDVESGSARGVITADGMRRDADAVLLAAGGDVPAIVAEAGQHIGDSTPVALLVRTKPIRH
PLKAVLNTPRVAIRPTPNGGFALDAAWSEEEVSVKPDGSYDVRQSTLEGLLREASRVLEGNPVLEVEDYGVGPKPIPGDG
EPVFGELPSISGYFVAFSHSGATLGLIAGELLADEIATGHRHPLLADFRPERFSASQR
>Mature_378_residues
MNASIKPSKVVVIGGGIFGVSTAVHLARLGVRTVLINDGPLANGASGRSLAWLNSARKRTDAYHRLRLAGIDRYRTLAVR
YPDAPWLRFDGGLTWDADDAGNEIAEIFDYERDLGYHAQWLAPQRIAAATPGVDASVVTRQGAIFNPGEGWVDLPSLIGT
LVKEFRTLGGEIVTDAGRAMVDVESGSARGVITADGMRRDADAVLLAAGGDVPAIVAEAGQHIGDSTPVALLVRTKPIRH
PLKAVLNTPRVAIRPTPNGGFALDAAWSEEEVSVKPDGSYDVRQSTLEGLLREASRVLEGNPVLEVEDYGVGPKPIPGDG
EPVFGELPSISGYFVAFSHSGATLGLIAGELLADEIATGHRHPLLADFRPERFSASQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI20130091, Length=391, Percent_Identity=24.5524296675192, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40159; Mature: 40159

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASIKPSKVVVIGGGIFGVSTAVHLARLGVRTVLINDGPLANGASGRSLAWLNSARKRT
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEHHHHHHHHHH
DAYHRLRLAGIDRYRTLAVRYPDAPWLRFDGGLTWDADDAGNEIAEIFDYERDLGYHAQW
HHHHHHHEECCCCEEEEEEECCCCCCEEECCCEEECCCCCCHHHHHHHHHHHCCCCCEEE
LAPQRIAAATPGVDASVVTRQGAIFNPGEGWVDLPSLIGTLVKEFRTLGGEIVTDAGRAM
CCCHHHHHCCCCCCHHEEECCCCEECCCCCCEEHHHHHHHHHHHHHHHCCEEEECCCCEE
VDVESGSARGVITADGMRRDADAVLLAAGGDVPAIVAEAGQHIGDSTPVALLVRTKPIRH
EEECCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCHHH
PLKAVLNTPRVAIRPTPNGGFALDAAWSEEEVSVKPDGSYDVRQSTLEGLLREASRVLEG
HHHHHHCCCCEEEEECCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
NPVLEVEDYGVGPKPIPGDGEPVFGELPSISGYFVAFSHSGATLGLIAGELLADEIATGH
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCC
RHPLLADFRPERFSASQR
CCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MNASIKPSKVVVIGGGIFGVSTAVHLARLGVRTVLINDGPLANGASGRSLAWLNSARKRT
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEHHHHHHHHHH
DAYHRLRLAGIDRYRTLAVRYPDAPWLRFDGGLTWDADDAGNEIAEIFDYERDLGYHAQW
HHHHHHHEECCCCEEEEEEECCCCCCEEECCCEEECCCCCCHHHHHHHHHHHCCCCCEEE
LAPQRIAAATPGVDASVVTRQGAIFNPGEGWVDLPSLIGTLVKEFRTLGGEIVTDAGRAM
CCCHHHHHCCCCCCHHEEECCCCEECCCCCCEEHHHHHHHHHHHHHHHCCEEEECCCCEE
VDVESGSARGVITADGMRRDADAVLLAAGGDVPAIVAEAGQHIGDSTPVALLVRTKPIRH
EEECCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCHHH
PLKAVLNTPRVAIRPTPNGGFALDAAWSEEEVSVKPDGSYDVRQSTLEGLLREASRVLEG
HHHHHHCCCCEEEEECCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
NPVLEVEDYGVGPKPIPGDGEPVFGELPSISGYFVAFSHSGATLGLIAGELLADEIATGH
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCC
RHPLLADFRPERFSASQR
CCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA