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The map label for this gene is 116249393

Identifier: 116249393

GI number: 116249393

Start: 796123

End: 797226

Strand: Reverse

Name: 116249393

Synonym: pRL120731

Alternate gene names: NA

Gene position: 797226-796123 (Counterclockwise)

Preceding gene: 116249394

Following gene: 116249390

Centisome position: 91.63

GC content: 54.8

Gene sequence:

>1104_bases
ATGCTCCAGTCAAAAGACGCTTCATCTGAGCTGATAGATTTGATCTATGGAAGTCTATTCGGTGAGTGCAACTGGCAGGA
TTTTCTGGATCGCGTTGCGCAAACTTCGCCGAATGGCAAGGCTGCCCTCCATTACCACGATCTGGCCTCGCCTGTGGCCC
ATGTTCCCTTCGTATCGGGGTTTTCGAGGAATGAGGTCGACCAGTTCAGCAGCCACTTTGCCGCAGTGAACCCCTGGATT
CCGAGATTGAGCTTTGTGCCGGTTGGTCAAGGTGTCTGCGGAGACGAAATCTTTCCACGCGAAGACTTGCTCAAATCGGA
ATTCTACAATGATTGGCTGAAGGGACAGGCCCGATGCGAGACGAGCATCGGTGTCTCGATCATTCGGGAGGAAACCCGCA
CCTTCGTCCTATCGACCTGCACGTCGTCAGCCGACCCCGATTTCAACAAAGAGGCAGCCGGGCGTTACACGATACTCGCG
CCTCATTTGAAAAGAGCTTTCGACTTCATCCGGAAGCGCGATCTACTCGCCCCGGAAAGACAGACGACGCAAACCCTGTT
TGATAGCATCGGCGTCGGACTGATCTACGTTTCGGAGCAAGGGCGAGCACGTCAATGGAATAAGAGCGCGGAAGCCTTAA
TGGCGGCTGGCTTTCCTGTGCAAGTCGCCCCGAGTGGCAAGCTCGAACTTCAATGCGAGAGGTCGACTGCCGTTCTTAAT
TTCCTGACTTCCAGAAAGGGTGTGCAAACAAGGCCGCATACGGCGATTGCAAATGGGAAGGACAAGGCTAGCTATCGCAT
CACACTCCTCCGGCTCCAGTCTGATGCATTCACTGAGTTCGTGGAGGGGCCGACCGTGGCCGTCATTGTTGAGCCGATGG
TGGCCACGCCACTCAATGAGCGGCGAGATTTCCTAATGGAAGCCTACAAACTGACTGCGACGGAGATTCGGATCGCATCA
AGCATTGCCTCGGGCCATTCTCCAAAAGAGGTGGCCATAGCCGATCACATCAGCTACGAAACGGTCAGAACCCACCTCAG
AAACATCTATTCCAAGCTCGGGGTAAACTCCCGGGTTGGCTTGGTCGCGCTGCTCATGCGCTGA

Upstream 100 bases:

>100_bases
CATGGCCGCCGGCTTGATATTACATGGGGTTGCTGTTGTCTTTGCCTGACCAACGTTATTTAATACCGAAAATACTCGCT
GTGGGATTTTCAGAAAGATC

Downstream 100 bases:

>100_bases
CAATAGTCCTGCAACTCGTCCCTGCGCATGGCTAGCGAGCCTCTGCATATTGCGAACGGGTTCCGAGAGCAAAGACGTGT
GACACTCGACATGAATTCCG

Product: GerE family transcriptional regulator

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator Protein LuxR Family; GerE Family Transcriptional Regulator; Regulatory Protein LuxR

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLQSKDASSELIDLIYGSLFGECNWQDFLDRVAQTSPNGKAALHYHDLASPVAHVPFVSGFSRNEVDQFSSHFAAVNPWI
PRLSFVPVGQGVCGDEIFPREDLLKSEFYNDWLKGQARCETSIGVSIIREETRTFVLSTCTSSADPDFNKEAAGRYTILA
PHLKRAFDFIRKRDLLAPERQTTQTLFDSIGVGLIYVSEQGRARQWNKSAEALMAAGFPVQVAPSGKLELQCERSTAVLN
FLTSRKGVQTRPHTAIANGKDKASYRITLLRLQSDAFTEFVEGPTVAVIVEPMVATPLNERRDFLMEAYKLTATEIRIAS
SIASGHSPKEVAIADHISYETVRTHLRNIYSKLGVNSRVGLVALLMR

Sequences:

>Translated_367_residues
MLQSKDASSELIDLIYGSLFGECNWQDFLDRVAQTSPNGKAALHYHDLASPVAHVPFVSGFSRNEVDQFSSHFAAVNPWI
PRLSFVPVGQGVCGDEIFPREDLLKSEFYNDWLKGQARCETSIGVSIIREETRTFVLSTCTSSADPDFNKEAAGRYTILA
PHLKRAFDFIRKRDLLAPERQTTQTLFDSIGVGLIYVSEQGRARQWNKSAEALMAAGFPVQVAPSGKLELQCERSTAVLN
FLTSRKGVQTRPHTAIANGKDKASYRITLLRLQSDAFTEFVEGPTVAVIVEPMVATPLNERRDFLMEAYKLTATEIRIAS
SIASGHSPKEVAIADHISYETVRTHLRNIYSKLGVNSRVGLVALLMR
>Mature_367_residues
MLQSKDASSELIDLIYGSLFGECNWQDFLDRVAQTSPNGKAALHYHDLASPVAHVPFVSGFSRNEVDQFSSHFAAVNPWI
PRLSFVPVGQGVCGDEIFPREDLLKSEFYNDWLKGQARCETSIGVSIIREETRTFVLSTCTSSADPDFNKEAAGRYTILA
PHLKRAFDFIRKRDLLAPERQTTQTLFDSIGVGLIYVSEQGRARQWNKSAEALMAAGFPVQVAPSGKLELQCERSTAVLN
FLTSRKGVQTRPHTAIANGKDKASYRITLLRLQSDAFTEFVEGPTVAVIVEPMVATPLNERRDFLMEAYKLTATEIRIAS
SIASGHSPKEVAIADHISYETVRTHLRNIYSKLGVNSRVGLVALLMR

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40757; Mature: 40757

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSKDASSELIDLIYGSLFGECNWQDFLDRVAQTSPNGKAALHYHDLASPVAHVPFVSG
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCHHHHCCCCCC
FSRNEVDQFSSHFAAVNPWIPRLSFVPVGQGVCGDEIFPREDLLKSEFYNDWLKGQARCE
CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCC
TSIGVSIIREETRTFVLSTCTSSADPDFNKEAAGRYTILAPHLKRAFDFIRKRDLLAPER
HHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHCCCEEEECHHHHHHHHHHHHHHCCCCCH
QTTQTLFDSIGVGLIYVSEQGRARQWNKSAEALMAAGFPVQVAPSGKLELQCERSTAVLN
HHHHHHHHHCCCEEEEECCCCCCHHHCHHHHHHHHCCCCEEECCCCCEEEEECCHHHHHH
FLTSRKGVQTRPHTAIANGKDKASYRITLLRLQSDAFTEFVEGPTVAVIVEPMVATPLNE
HHHHCCCCCCCCCCEECCCCCCCEEEEEEEEECCHHHHHHHCCCEEEEEECCHHHCCCHH
RRDFLMEAYKLTATEIRIASSIASGHSPKEVAIADHISYETVRTHLRNIYSKLGVNSRVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVALLMR
HHHHCCC
>Mature Secondary Structure
MLQSKDASSELIDLIYGSLFGECNWQDFLDRVAQTSPNGKAALHYHDLASPVAHVPFVSG
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHCHHHHCCCCCC
FSRNEVDQFSSHFAAVNPWIPRLSFVPVGQGVCGDEIFPREDLLKSEFYNDWLKGQARCE
CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCC
TSIGVSIIREETRTFVLSTCTSSADPDFNKEAAGRYTILAPHLKRAFDFIRKRDLLAPER
HHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHCCCEEEECHHHHHHHHHHHHHHCCCCCH
QTTQTLFDSIGVGLIYVSEQGRARQWNKSAEALMAAGFPVQVAPSGKLELQCERSTAVLN
HHHHHHHHHCCCEEEEECCCCCCHHHCHHHHHHHHCCCCEEECCCCCEEEEECCHHHHHH
FLTSRKGVQTRPHTAIANGKDKASYRITLLRLQSDAFTEFVEGPTVAVIVEPMVATPLNE
HHHHCCCCCCCCCCEECCCCCCCEEEEEEEEECCHHHHHHHCCCEEEEEECCHHHCCCHH
RRDFLMEAYKLTATEIRIASSIASGHSPKEVAIADHISYETVRTHLRNIYSKLGVNSRVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LVALLMR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA