| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is zraS [C]
Identifier: 116249381
GI number: 116249381
Start: 786746
End: 788422
Strand: Direct
Name: zraS [C]
Synonym: pRL120719
Alternate gene names: 116249381
Gene position: 786746-788422 (Clockwise)
Preceding gene: 116249380
Following gene: 116249384
Centisome position: 90.43
GC content: 63.33
Gene sequence:
>1677_bases ATGAACCCCGTCAACATCCTCCTCGTCGACGACCAACCGGCAAAGCTCCTGAGTTACGAGGTCATTCTCGAAGAGCTCCA AGAAAACCTCATCAAGGCGCAATCCGCTCGCGAAGCCTTCGAGCACCTATTGCGCACCGAAATCGCGGTGATCCTCGTCG ATGTCTGCATGCCCGAACAGGATGGGTTCGAGCTCGTCAGCATGATCCGGCAGCATCCGCGCTATCAGAACACGCCGATC ATCTTCGTTTCCGCCGTCATGCTGGCGGAACCGGACCGGCTGCGCGGCTATGCGGTGGGCGCGGTCGACTACGTTTCCGT CCCGATCGTACCCGAAGTGCTGAGAGCCAAGGTGCGGGTCTTTGCCGATCTCTACAGGAAGACGAGGGAACTCGAACGCC TGAACGTTGAGCTGGAGGCGCGCGTTCACCAACGCACCGCCGAGCTCGAGGCCTCGGCAGCGCAGTTGCGTGAGCTCAAC GAGGAGCTCGAGCACCGGATCGATCAACGGACGCGGGAGCGCGAAGAAGCGCTCGCACAACTGTTCGAGGCGCAAAAACT CGACACGATCGGCCACCTGACGGGCGGCGTGGCGCACGACTTCAATAACCTCCTGATGGCAGTTCTCGGCAGCCTCAACC TTCTGAAGAAGCGGCTTCCGGCCGATGAACGCAGCGAACGCCTGGTGACGAATGCGATCCAGGCGGCCGAGCGCGGCACG GCGCTGACCCAGCGCCTGCTTGCCTTCGCACGCCGCCAGGAGCTCAAGCCGCAGGCAGTCGACTTCTTCAGGCTGTTCGA AAACGTCGAGGATCTTCTCGCCAAGGCGGTGGGGCCGCGCATCGAAATCCGCAAAAGCATCCCGGCGGATCTGGCGCCCC TCCTAGTCGACAGCAACCAACTGGAACTGGCGCTGCTTAACCTGTTCGTCAATGCGCGGGATGCGCTCGAAAGCGGCGGA GCCGTGACGGTGGCCGCGGCGGCAGCCGAAGACGCCCGGCCGGCCGGCCTCGCGGGCGGAAATTACATCAGGATTTCGGT TTCGGACGATGGCGAGGGGATGGACGAGGCAACGGTCTCGCGTGCCGCCGAACCGTTTTTCACCACCAAAGGGGTCGGCA AGGGCACCGGTCTCGGCCTGTCGATGGTGCACGGCCTGGCAGCGCAATCCGGCGGCTCGATCCAGATATCGAGCGTCAGG GGCAAGGGCACGACCGTTTCGCTGTGGCTGCCCGTTGCCGAGACATTCGTCAAGGTGCAGCCTCCCGTCGAGCCTCCGGC GACGGAGCCTTTGAAACCGGCGTCGCGGCCGCTTGCCATTCTGGTGGTCGACGACGACGCTCTTGTGAGGACGGGAACCG TGGCGATGCTGGAGGATCTCGGGCACCTGCCGCAGGAAGCGTCTTCCGCTTCCCAGGCTTTGGAATTCTTTGCCGACGGA CAGGGTTGCGATCTCGTCATCACCGATCATGCCATGCCGGGCATGACGGGCGCCGAGCTTGCACGTCACCTTCGCTCCTC CTTTCCAGGCCTGCCCATCATCCTAGCCTCGGGCTACGCCGAGTTTTCCGAAGACCATGGCCTCGGCCGGATGCTGCGGA TGAAGAAGCCATTCACGCAGGAACAGCTTCAGGCAGCGATGGATCAGGCGCTCTCGGGCAAAGTCGCGGCGGCTTGA
Upstream 100 bases:
>100_bases TGCCTGGAAGCGGGCGCGTCCGACTATCTGGCGAAGCCGGTCAATACCGAACAGCTTCTGTCGGCTCTTCGCATGTGGTT GCATCGCTGAGGATCTGGCC
Downstream 100 bases:
>100_bases CGATCGAAGTGGGGATGTACTGGGTGTGTTGCGTTCTGGGCCAGTTCTAACCCTCGTCGCTTTCAAACTGCCGCCCGGCA TAGAGGATGCGGAGGACAAC
Product: two-component histidine kinase/response regulator motif-containing protein
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MNPVNILLVDDQPAKLLSYEVILEELQENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQDGFELVSMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNVELEARVHQRTAELEASAAQLRELN EELEHRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLNLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFFRLFENVEDLLAKAVGPRIEIRKSIPADLAPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAAEDARPAGLAGGNYIRISVSDDGEGMDEATVSRAAEPFFTTKGVGKGTGLGLSMVHGLAAQSGGSIQISSVR GKGTTVSLWLPVAETFVKVQPPVEPPATEPLKPASRPLAILVVDDDALVRTGTVAMLEDLGHLPQEASSASQALEFFADG QGCDLVITDHAMPGMTGAELARHLRSSFPGLPIILASGYAEFSEDHGLGRMLRMKKPFTQEQLQAAMDQALSGKVAAA
Sequences:
>Translated_558_residues MNPVNILLVDDQPAKLLSYEVILEELQENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQDGFELVSMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNVELEARVHQRTAELEASAAQLRELN EELEHRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLNLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFFRLFENVEDLLAKAVGPRIEIRKSIPADLAPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAAEDARPAGLAGGNYIRISVSDDGEGMDEATVSRAAEPFFTTKGVGKGTGLGLSMVHGLAAQSGGSIQISSVR GKGTTVSLWLPVAETFVKVQPPVEPPATEPLKPASRPLAILVVDDDALVRTGTVAMLEDLGHLPQEASSASQALEFFADG QGCDLVITDHAMPGMTGAELARHLRSSFPGLPIILASGYAEFSEDHGLGRMLRMKKPFTQEQLQAAMDQALSGKVAAA >Mature_558_residues MNPVNILLVDDQPAKLLSYEVILEELQENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQDGFELVSMIRQHPRYQNTPI IFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRVFADLYRKTRELERLNVELEARVHQRTAELEASAAQLRELN EELEHRIDQRTREREEALAQLFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLNLLKKRLPADERSERLVTNAIQAAERGT ALTQRLLAFARRQELKPQAVDFFRLFENVEDLLAKAVGPRIEIRKSIPADLAPLLVDSNQLELALLNLFVNARDALESGG AVTVAAAAAEDARPAGLAGGNYIRISVSDDGEGMDEATVSRAAEPFFTTKGVGKGTGLGLSMVHGLAAQSGGSIQISSVR GKGTTVSLWLPVAETFVKVQPPVEPPATEPLKPASRPLAILVVDDDALVRTGTVAMLEDLGHLPQEASSASQALEFFADG QGCDLVITDHAMPGMTGAELARHLRSSFPGLPIILASGYAEFSEDHGLGRMLRMKKPFTQEQLQAAMDQALSGKVAAA
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=33.0612244897959, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1788549, Length=284, Percent_Identity=27.4647887323944, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI48994928, Length=373, Percent_Identity=28.1501340482574, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1788713, Length=373, Percent_Identity=26.5415549597855, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI87081816, Length=182, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 60693; Mature: 60693
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVNILLVDDQPAKLLSYEVILEELQENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQ CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGFELVSMIRQHPRYQNTPIIFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRV CCHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHCCEEECCHHHEECCCHHHHHHHHHHH FADLYRKTRELERLNVELEARVHQRTAELEASAAQLRELNEELEHRIDQRTREREEALAQ HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLNLLKKRLPADERSERLVTNAIQAAERGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ALTQRLLAFARRQELKPQAVDFFRLFENVEDLLAKAVGPRIEIRKSIPADLAPLLVDSNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHCCCCC LELALLNLFVNARDALESGGAVTVAAAAAEDARPAGLAGGNYIRISVSDDGEGMDEATVS HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH RAAEPFFTTKGVGKGTGLGLSMVHGLAAQSGGSIQISSVRGKGTTVSLWLPVAETFVKVQ HCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHHHHEECC PPVEPPATEPLKPASRPLAILVVDDDALVRTGTVAMLEDLGHLPQEASSASQALEFFADG CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC QGCDLVITDHAMPGMTGAELARHLRSSFPGLPIILASGYAEFSEDHGLGRMLRMKKPFTQ CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHCCCCCH EQLQAAMDQALSGKVAAA HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNPVNILLVDDQPAKLLSYEVILEELQENLIKAQSAREAFEHLLRTEIAVILVDVCMPEQ CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGFELVSMIRQHPRYQNTPIIFVSAVMLAEPDRLRGYAVGAVDYVSVPIVPEVLRAKVRV CCHHHHHHHHHCCCCCCCCEEEEEHHHHCCCHHHCCEEECCHHHEECCCHHHHHHHHHHH FADLYRKTRELERLNVELEARVHQRTAELEASAAQLRELNEELEHRIDQRTREREEALAQ HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEAQKLDTIGHLTGGVAHDFNNLLMAVLGSLNLLKKRLPADERSERLVTNAIQAAERGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ALTQRLLAFARRQELKPQAVDFFRLFENVEDLLAKAVGPRIEIRKSIPADLAPLLVDSNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHCCCCC LELALLNLFVNARDALESGGAVTVAAAAAEDARPAGLAGGNYIRISVSDDGEGMDEATVS HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH RAAEPFFTTKGVGKGTGLGLSMVHGLAAQSGGSIQISSVRGKGTTVSLWLPVAETFVKVQ HCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEHHHHHEECC PPVEPPATEPLKPASRPLAILVVDDDALVRTGTVAMLEDLGHLPQEASSASQALEFFADG CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC QGCDLVITDHAMPGMTGAELARHLRSSFPGLPIILASGYAEFSEDHGLGRMLRMKKPFTQ CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHCCCCCH EQLQAAMDQALSGKVAAA HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA