| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249369
Identifier: 116249369
GI number: 116249369
Start: 765573
End: 766019
Strand: Reverse
Name: 116249369
Synonym: pRL120707
Alternate gene names: NA
Gene position: 766019-765573 (Counterclockwise)
Preceding gene: 116249373
Following gene: 116249368
Centisome position: 88.05
GC content: 60.4
Gene sequence:
>447_bases GTGCCGTATTTGGATAGTCTTCCGCTTCCCGGGAGGGTGACCCATTTGGCTGCTGACTGCGCACCATTGCTTCGATCGAT ACGCCTTAGCGCCGCCCTGTCGGCTTGCGCACTGTGCCTCGCCTCCTGGAGCATAGAGACCGATCGATCCACTGAAGACA CGCATGGCCTGTTCGAAATCCGCGAGGAGGCCAGGCGCTTCATTTCGCAGGAGAACGCCAAGGGGCATCAGCAATGGGAC GCGCTGGAGCCTAACATGAAGACGCTGGTTCCCCGATGCGCGGTTCCGCTCGAAACACGGTGGACGCCGAAGAGCTATGG CCGCTCGAAACCGAGCGTGATGGTCATATGCACGGCCTCGGTGCCCAACACCGTGATGAGACGTTGGGATGTACATGTTC CGGTAGAGCGGAAGCCAAATCAGACGGGAAGCCCCGCCCCGTTCTGA
Upstream 100 bases:
>100_bases ATGTGCAGACATCGTCGGCCGCACTGGCGCCGGATCGATGGGATGCGCTCCGTTCGCGCATCAAAGGCCCTGGATTTCCG CAGACGGACCTTGAAGGTTT
Downstream 100 bases:
>100_bases AAGAGCAGGCGCCCGAACGGGACTTGATGTATCCGAATGAATCACTGCGATTGCAATAAAGGCGACCAGACGTGAATCCA TCGGTGGAATTGTGTTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEIREEARRFISQENAKGHQQWD ALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTASVPNTVMRRWDVHVPVERKPNQTGSPAPF
Sequences:
>Translated_148_residues MPYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEIREEARRFISQENAKGHQQWD ALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTASVPNTVMRRWDVHVPVERKPNQTGSPAPF >Mature_147_residues PYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEIREEARRFISQENAKGHQQWDA LEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTASVPNTVMRRWDVHVPVERKPNQTGSPAPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16537; Mature: 16406
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH REEARRFISQENAKGHQQWDALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTAS HHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEECC VPNTVMRRWDVHVPVERKPNQTGSPAPF CCHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH REEARRFISQENAKGHQQWDALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTAS HHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEECC VPNTVMRRWDVHVPVERKPNQTGSPAPF CCHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA