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The map label for this gene is yphH [C]

Identifier: 116249355

GI number: 116249355

Start: 747930

End: 749081

Strand: Reverse

Name: yphH [C]

Synonym: pRL120692

Alternate gene names: 116249355

Gene position: 749081-747930 (Counterclockwise)

Preceding gene: 116249357

Following gene: 116249348

Centisome position: 86.1

GC content: 60.16

Gene sequence:

>1152_bases
ATGAAGTATGATCCGCTAAACCATGTTGCCGCGCATTTTTTGCGAGACACACAACCCGTGCGCGTAGCTTCCCGCAACGA
GCGTGATCTGTTGCGGCTGATCTGGAAGTCTCCGGGGATCGAGCGCTCCGACCTGACAGAGCCGCTCGATCTCACCCAGC
AATCGTTGCACAGGATCGTCGCGCGGCTTCATGAGCGAGGAATGCTCGTCTTTTCCCATTCGGAAACCCGGCGCCCGGGA
CCGCCCAGCCCGGAGCTGACCCTTCGCAAAGAATGGTGTTTAACCCTGGGCATCTCCGTGAACGTCGGTTCGATCGGCCT
TTGCCTCATGGGTTTCGGCGAGCCTTTGGAAAAAATGGAAATCCCACAGGCGGGCTCCTCGCTATCCGCTGAAATGGAGC
GGATCGAAGCGGCGGTCGAAGAGCTTCTTGCCCGCCGGGGCGCCAAACGGCGTGACGTCCTCGGCGTCGGCCTGGCCGTC
GCCGGCCACCGTATGCTGGAGACGGCCTTCAATTGCCCCTTGCCGCTCGCTCATTGGTCATTGATCGACCTGGCACCTTT
GCTTGGAGAGCAACTTGGCCTGCCGGTCTGGGCAGACAATGTCGCCAGGACCGCAGCCTTGGCGGAAGCCATTTTCGGTG
TCGGCCGGGATGTCGCGGATTTCGCCTACATCGCCCATCTTCATGGCTATGGCGGCGGCCTGGTTTCCGGAGGCATGCCG
TTTCGCGGCAATTTCGGCAACGCCGGCGAATTTTCCGTTCTCTTCGGACGTCAGGACTATGAGGAACGCCCTGCACTCGG
CGTCCTGCTTGAACATCTTCGTTCCAAGGGGCGCTCGAACTTGACCCTGAGAGACCTGAAGGACGAGAAGCTGATGGACT
GGGATGGTGTCACGGAGTGGGTCGACCGCGTCACGCCGGCCCACAATCGAGCCATTAATGCGATCTGCGCAATATTTGAT
CCGGCATTGATCGTCCTCGGCGGCGAGCTTCCGCATTCACTGGCGAGAATGCTGATCGAACGCACAGACTTCAACAATCT
GCCTCGGCATGGCGTTTTACGCGATGTTCCCAGGCTTGCCGTGGCACAGATAACCGATGCCCCCGGCGCAATCGGCGCGG
CCCTGATCCCGCTCTTCGAAACCGTTTTGTGA

Upstream 100 bases:

>100_bases
GCAGAGCCGGCAAACCGGGGATCGAATTCCCTGTTTGACAGAAGCAAAATGCCCTCCCAATGTGGTTCACACTCACAGTG
TAAATTAAAACGAACCGAAA

Downstream 100 bases:

>100_bases
TATTTGCAGGACGCCGTAGCATTTTGAAATCGTCGTCAACATAGCCTAAAACGGCCGCCCATCAGGTCGCGGAGACCGCC
GGCCCCGATGGCAATCGCTA

Product: ROK family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKYDPLNHVAAHFLRDTQPVRVASRNERDLLRLIWKSPGIERSDLTEPLDLTQQSLHRIVARLHERGMLVFSHSETRRPG
PPSPELTLRKEWCLTLGISVNVGSIGLCLMGFGEPLEKMEIPQAGSSLSAEMERIEAAVEELLARRGAKRRDVLGVGLAV
AGHRMLETAFNCPLPLAHWSLIDLAPLLGEQLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
FRGNFGNAGEFSVLFGRQDYEERPALGVLLEHLRSKGRSNLTLRDLKDEKLMDWDGVTEWVDRVTPAHNRAINAICAIFD
PALIVLGGELPHSLARMLIERTDFNNLPRHGVLRDVPRLAVAQITDAPGAIGAALIPLFETVL

Sequences:

>Translated_383_residues
MKYDPLNHVAAHFLRDTQPVRVASRNERDLLRLIWKSPGIERSDLTEPLDLTQQSLHRIVARLHERGMLVFSHSETRRPG
PPSPELTLRKEWCLTLGISVNVGSIGLCLMGFGEPLEKMEIPQAGSSLSAEMERIEAAVEELLARRGAKRRDVLGVGLAV
AGHRMLETAFNCPLPLAHWSLIDLAPLLGEQLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
FRGNFGNAGEFSVLFGRQDYEERPALGVLLEHLRSKGRSNLTLRDLKDEKLMDWDGVTEWVDRVTPAHNRAINAICAIFD
PALIVLGGELPHSLARMLIERTDFNNLPRHGVLRDVPRLAVAQITDAPGAIGAALIPLFETVL
>Mature_383_residues
MKYDPLNHVAAHFLRDTQPVRVASRNERDLLRLIWKSPGIERSDLTEPLDLTQQSLHRIVARLHERGMLVFSHSETRRPG
PPSPELTLRKEWCLTLGISVNVGSIGLCLMGFGEPLEKMEIPQAGSSLSAEMERIEAAVEELLARRGAKRRDVLGVGLAV
AGHRMLETAFNCPLPLAHWSLIDLAPLLGEQLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
FRGNFGNAGEFSVLFGRQDYEERPALGVLLEHLRSKGRSNLTLRDLKDEKLMDWDGVTEWVDRVTPAHNRAINAICAIFD
PALIVLGGELPHSLARMLIERTDFNNLPRHGVLRDVPRLAVAQITDAPGAIGAALIPLFETVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 42064; Mature: 42064

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYDPLNHVAAHFLRDTQPVRVASRNERDLLRLIWKSPGIERSDLTEPLDLTQQSLHRIV
CCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH
ARLHERGMLVFSHSETRRPGPPSPELTLRKEWCLTLGISVNVGSIGLCLMGFGEPLEKME
HHHHHCCEEEEECCCCCCCCCCCCCEEEEHHEEEEEEEEECCCCHHHHHHCCCCCHHHHC
IPQAGSSLSAEMERIEAAVEELLARRGAKRRDVLGVGLAVAGHRMLETAFNCPLPLAHWS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LIDLAPLLGEQLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
FRGNFGNAGEFSVLFGRQDYEERPALGVLLEHLRSKGRSNLTLRDLKDEKLMDWDGVTEW
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHH
VDRVTPAHNRAINAICAIFDPALIVLGGELPHSLARMLIERTDFNNLPRHGVLRDVPRLA
HHHCCCHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VAQITDAPGAIGAALIPLFETVL
HHHHCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MKYDPLNHVAAHFLRDTQPVRVASRNERDLLRLIWKSPGIERSDLTEPLDLTQQSLHRIV
CCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH
ARLHERGMLVFSHSETRRPGPPSPELTLRKEWCLTLGISVNVGSIGLCLMGFGEPLEKME
HHHHHCCEEEEECCCCCCCCCCCCCEEEEHHEEEEEEEEECCCCHHHHHHCCCCCHHHHC
IPQAGSSLSAEMERIEAAVEELLARRGAKRRDVLGVGLAVAGHRMLETAFNCPLPLAHWS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LIDLAPLLGEQLGLPVWADNVARTAALAEAIFGVGRDVADFAYIAHLHGYGGGLVSGGMP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
FRGNFGNAGEFSVLFGRQDYEERPALGVLLEHLRSKGRSNLTLRDLKDEKLMDWDGVTEW
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHH
VDRVTPAHNRAINAICAIFDPALIVLGGELPHSLARMLIERTDFNNLPRHGVLRDVPRLA
HHHCCCHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VAQITDAPGAIGAALIPLFETVL
HHHHCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]