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The map label for this gene is 116249336

Identifier: 116249336

GI number: 116249336

Start: 724978

End: 725556

Strand: Reverse

Name: 116249336

Synonym: pRL120673

Alternate gene names: NA

Gene position: 725556-724978 (Counterclockwise)

Preceding gene: 116249337

Following gene: 116249335

Centisome position: 83.4

GC content: 60.1

Gene sequence:

>579_bases
ATGGAGCAAAAAATGTCCGGCCATGATACTGTCCTTCTCGTTATCGACGCTCAGGAGTCCTTCAGACACCGCGATTACTG
GGATGAAAACCTCGCTTCCGCCTATATCGACCGTCAGCAGACTCTGATCGACGGCGCGCAAGTCGATGGAATACCCATCA
TCCAGATCTTCCATGTCGATGAAAACGGTCCGTTCTCGGAAGCATCCGGGTTCGTCAGCACACTCGCCCCGCTCAGGATC
GCTCCCAAGGCGACGTTCAGGAAGAACCGCCATAGCGCCCTGGTTGGTTCCGGTCTCGACGTGTGGCTGACCGAGAACGG
CGTCCGCCGTATCCTCGTCTCCGGCATCCGCACCGAACAGTGCTGCGAGACCACGACCCGCCATGCCTCGGATCTCGGCT
ATCAAGTCGACTATGTCGGCGAAGCGACCCTGACCTTTCCAATGACCGACGTCACAGGACGCACCTGGAGCGCGAGGGAA
ATCCGGGACCGGACCGAACTGGTCCTGTCGGGCCGTTTCGCTCGGATCGCGACCGTCGAACAGGCCTTGGCCGGGCGCGA
AAAATCGCTCGCCGCATGA

Upstream 100 bases:

>100_bases
TCCTGAGCGTGGCTATTGGCGCGAATTGTCCGTTATTTGTCCGGCGCGCGCATTTTCCCCTGTCTTCAAATCGCCGAATA
TGACTTCATGATCAACCTGC

Downstream 100 bases:

>100_bases
CCGACGCCGCGCAGCCCTTCGATATCCCGGTCTTCGTCGTCGTGCCGCCGCGCGTGCTGCTGCTCGACGTGGCCGGCCCG
ATCGAAGTGCTGCGCAAGGC

Product: putative isochorismatase family protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Hydrolase; Isochorismatase; Isochorismatase Protein; Amidohydrolase; Isochorismatase Hydrolase Fragment; Isochorismatase-Family Hydrolase; Isochorismatase Family; Isochorismatase Family Hydrolase; Nicotinamidase-Like Amidase; Isochorismatase Superfamily Hydrolase

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEQKMSGHDTVLLVIDAQESFRHRDYWDENLASAYIDRQQTLIDGAQVDGIPIIQIFHVDENGPFSEASGFVSTLAPLRI
APKATFRKNRHSALVGSGLDVWLTENGVRRILVSGIRTEQCCETTTRHASDLGYQVDYVGEATLTFPMTDVTGRTWSARE
IRDRTELVLSGRFARIATVEQALAGREKSLAA

Sequences:

>Translated_192_residues
MEQKMSGHDTVLLVIDAQESFRHRDYWDENLASAYIDRQQTLIDGAQVDGIPIIQIFHVDENGPFSEASGFVSTLAPLRI
APKATFRKNRHSALVGSGLDVWLTENGVRRILVSGIRTEQCCETTTRHASDLGYQVDYVGEATLTFPMTDVTGRTWSARE
IRDRTELVLSGRFARIATVEQALAGREKSLAA
>Mature_192_residues
MEQKMSGHDTVLLVIDAQESFRHRDYWDENLASAYIDRQQTLIDGAQVDGIPIIQIFHVDENGPFSEASGFVSTLAPLRI
APKATFRKNRHSALVGSGLDVWLTENGVRRILVSGIRTEQCCETTTRHASDLGYQVDYVGEATLTFPMTDVTGRTWSARE
IRDRTELVLSGRFARIATVEQALAGREKSLAA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21367; Mature: 21367

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKMSGHDTVLLVIDAQESFRHRDYWDENLASAYIDRQQTLIDGAQVDGIPIIQIFHVD
CCCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEC
ENGPFSEASGFVSTLAPLRIAPKATFRKNRHSALVGSGLDVWLTENGVRRILVSGIRTEQ
CCCCHHHHHHHHHHHHCCEECCCHHHHCCCCCEEECCCCEEEEECCCHHHHHHHCCCHHH
CCETTTRHASDLGYQVDYVGEATLTFPMTDVTGRTWSAREIRDRTELVLSGRFARIATVE
HHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
QALAGREKSLAA
HHHCCCHHCCCC
>Mature Secondary Structure
MEQKMSGHDTVLLVIDAQESFRHRDYWDENLASAYIDRQQTLIDGAQVDGIPIIQIFHVD
CCCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEC
ENGPFSEASGFVSTLAPLRIAPKATFRKNRHSALVGSGLDVWLTENGVRRILVSGIRTEQ
CCCCHHHHHHHHHHHHCCEECCCHHHHCCCCCEEECCCCEEEEECCCHHHHHHHCCCHHH
CCETTTRHASDLGYQVDYVGEATLTFPMTDVTGRTWSAREIRDRTELVLSGRFARIATVE
HHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
QALAGREKSLAA
HHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA