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The map label for this gene is glxA [H]

Identifier: 116249335

GI number: 116249335

Start: 723971

End: 724981

Strand: Reverse

Name: glxA [H]

Synonym: pRL120672

Alternate gene names: 116249335

Gene position: 724981-723971 (Counterclockwise)

Preceding gene: 116249336

Following gene: 116249334

Centisome position: 83.33

GC content: 66.27

Gene sequence:

>1011_bases
ATGACCGACGCCGCGCAGCCCTTCGATATCCCGGTCTTCGTCGTCGTGCCGCCGCGCGTGCTGCTGCTCGACGTGGCCGG
CCCGATCGAAGTGCTGCGCAAGGCGAACCTCGAACAGCACACGGTGCGTTTTACCGTGACCTATATCGGCCCATCGGCGA
CGGTCGGCAGCTCGATCGGTCTTGCCGTTACGGGCGTCGCCGCGTTACCCGAGCGCTTGCCCGATAACGCGCTTGTCGTC
ATTGCCGGCAGCGCCGATGCCCCGATGGATAACAACCGCCCGTGGGACGAACAGGAACGCGCCGAGCAGGCTGCCATCGT
CGCATGGCTGAAGCGCGCCATTCTTCCGGGAATTCGTCTGGTCTCGATCTGCTCGGGCGCATTGCTCGCTGCCGAAGCAG
GCATGCTCGACGGCCGCGACTGCACCACCCACCACGCCTGCATAGAGGATCTGGTGAGACTCGCACCCACCGCGCGCGTC
CGGGACAACCGGCTCTATGTCGAGGATGGAGACCGCCTCACCAGCGCCGGCATCACCGCCGGCATAGATCTCATGCTGCA
TATCGTTGCCGAAGCGGCGGGACATGCCTGCGCGCTTGCGGTTGCGCGATATCTTGTCGTCTATCTCAGGCGCGGCGGCT
CGGATCCGCAGCTTTCGCCCTGGCTCGAAGGTCGCAACCATATCCACCCGGTCATTCACCGCGCGCAGGATGCGGTGGTC
GCCAACCCCTCTCAGGATTGGTCGGTCGCCTCGCTCGCGCGCCTCAGCGGTGCCAGCCCGCGCAACCTTTCACGGCTGTT
CAACGAGCAGACGGGCATGAGCGTTACGGATTTCGTCAACCTTATGCGCGTGGCTCTTGCCCGCGAGATGCTCGCCGGTT
CACGGCTGGACATGGAGGCCGTCGCGATGCGCGCCGGCTTCGGCTCGGCGCGGCAGCTCCGCCGCGCCTGGAACCGCCTT
AATGACGGCCCGCCGAGCGCGGCACGGTCAAGGCTGCCCGTCGGTTCATAG

Upstream 100 bases:

>100_bases
GGGAAATCCGGGACCGGACCGAACTGGTCCTGTCGGGCCGTTTCGCTCGGATCGCGACCGTCGAACAGGCCTTGGCCGGG
CGCGAAAAATCGCTCGCCGC

Downstream 100 bases:

>100_bases
ACTGCTCGCCGCCGGCCGCCAGATCGGGATCACGGTCGCGGACATATTCTCTCGCAATTTTCACGTTGAAGCGCTTGCCG
CGATGGTTGCCGCATGCGCT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTDAAQPFDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQHTVRFTVTYIGPSATVGSSIGLAVTGVAALPERLPDNALVV
IAGSADAPMDNNRPWDEQERAEQAAIVAWLKRAILPGIRLVSICSGALLAAEAGMLDGRDCTTHHACIEDLVRLAPTARV
RDNRLYVEDGDRLTSAGITAGIDLMLHIVAEAAGHACALAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
ANPSQDWSVASLARLSGASPRNLSRLFNEQTGMSVTDFVNLMRVALAREMLAGSRLDMEAVAMRAGFGSARQLRRAWNRL
NDGPPSAARSRLPVGS

Sequences:

>Translated_336_residues
MTDAAQPFDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQHTVRFTVTYIGPSATVGSSIGLAVTGVAALPERLPDNALVV
IAGSADAPMDNNRPWDEQERAEQAAIVAWLKRAILPGIRLVSICSGALLAAEAGMLDGRDCTTHHACIEDLVRLAPTARV
RDNRLYVEDGDRLTSAGITAGIDLMLHIVAEAAGHACALAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
ANPSQDWSVASLARLSGASPRNLSRLFNEQTGMSVTDFVNLMRVALAREMLAGSRLDMEAVAMRAGFGSARQLRRAWNRL
NDGPPSAARSRLPVGS
>Mature_335_residues
TDAAQPFDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQHTVRFTVTYIGPSATVGSSIGLAVTGVAALPERLPDNALVVI
AGSADAPMDNNRPWDEQERAEQAAIVAWLKRAILPGIRLVSICSGALLAAEAGMLDGRDCTTHHACIEDLVRLAPTARVR
DNRLYVEDGDRLTSAGITAGIDLMLHIVAEAAGHACALAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVVA
NPSQDWSVASLARLSGASPRNLSRLFNEQTGMSVTDFVNLMRVALAREMLAGSRLDMEAVAMRAGFGSARQLRRAWNRLN
DGPPSAARSRLPVGS

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36056; Mature: 35925

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAAQPFDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQHTVRFTVTYIGPSATVGSSIG
CCCCCCCCCCEEEEEECCEEEEEECCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC
LAVTGVAALPERLPDNALVVIAGSADAPMDNNRPWDEQERAEQAAIVAWLKRAILPGIRL
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
VSICSGALLAAEAGMLDGRDCTTHHACIEDLVRLAPTARVRDNRLYVEDGDRLTSAGITA
HHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEECCCEEHHCCHHH
GIDLMLHIVAEAAGHACALAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCEE
ANPSQDWSVASLARLSGASPRNLSRLFNEQTGMSVTDFVNLMRVALAREMLAGSRLDMEA
ECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
VAMRAGFGSARQLRRAWNRLNDGPPSAARSRLPVGS
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
TDAAQPFDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQHTVRFTVTYIGPSATVGSSIG
CCCCCCCCCEEEEEECCEEEEEECCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC
LAVTGVAALPERLPDNALVVIAGSADAPMDNNRPWDEQERAEQAAIVAWLKRAILPGIRL
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
VSICSGALLAAEAGMLDGRDCTTHHACIEDLVRLAPTARVRDNRLYVEDGDRLTSAGITA
HHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEECCCEEHHCCHHH
GIDLMLHIVAEAAGHACALAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCEE
ANPSQDWSVASLARLSGASPRNLSRLFNEQTGMSVTDFVNLMRVALAREMLAGSRLDMEA
ECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
VAMRAGFGSARQLRRAWNRLNDGPPSAARSRLPVGS
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]