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The map label for this gene is ytlD [H]

Identifier: 116249332

GI number: 116249332

Start: 720806

End: 721687

Strand: Reverse

Name: ytlD [H]

Synonym: pRL120669

Alternate gene names: 116249332

Gene position: 721687-720806 (Counterclockwise)

Preceding gene: 116249333

Following gene: 116249327

Centisome position: 82.95

GC content: 59.07

Gene sequence:

>882_bases
ATGGCACACATCACACTTGAGGCCGGTTCGGCCACCATGTTTCGGCCGGGCACCTCGGACACGGAAATCGAGGCATCGGC
GCTGAAGACAATGCGCCGGCGCAAAACGCTGGTGCGCTTTTGGCAGATCGCCATCCTGGTCTTCGTGATCGGCATGTGGG
AGCTGTCCTCAAACATGCAATGGATCGATCCGTTCTTCTATTCGAGCCCGAGCGGCGTCGTTCAGCGCCTCTACGAATGG
GCAACCGAAGGCACCACGGAAGGTTCGCTCTGGTATAATCTATGGGTGACGATGGAGGAGGCCTTGATCGGCTTCTTCGC
GGGTTCGATCACCGGCGTCTTCGTCGGCATCGGTCTTGGCCGCAACCGCTTCCTGTCGGACATCTTCTCCGTCTATATCA
AGGCGATCAATTCGATACCGCGCGTCGTTCTCGCCCCCATCTTCATCATGATCATGGGTCTCGGCCTGCCTTCCAAGGTT
GCTCTCGCCTTCATCATGGTGTTCTTCGTCGTCTTTGCAAACGCCTTCCAGGGTGTGCGCGAGGCCGACCGCAATATGAT
CGCCAACGCCCGCATTCTCGGCGCCTCGGACTGGCAGGTCACCCGCACGGTGGTCATTCCCTCGGCGATGAGCTGGATCT
TCGCCAGTCTGCACGTGTCCTTTGGTTTCGCGATCATCGGCGCAATCGTCGGCGAATTCGTCGGCGCCCGCTTTGGGATC
GGTCAGCTCATCTCGATCGCCAAGGGTACCTTCGATGCGGCCGGCATGTTCGCGGCCATCCTCCTCGTCATGGTCGTCAC
GCTTTTTGCCGAATACATCATGACATTGATCGAGAACCGCCTGGCGAAATGGCGTCCGCAGCAGCACCTCGATACCCAGT
GA

Upstream 100 bases:

>100_bases
AGAGCTTCATCGACTATTGCAAGACGATCTGGGAGGACCTCCGCGAGGAGGTGGAGACCAGCTACCGCCGCGCGAGCGAA
GCGGCCTGAGGGAGGATATC

Downstream 100 bases:

>100_bases
TCCAATCGACCTCCTCCCAAGGTGGATCGAACAGAAGGCCGGGTGCATGCCCGGCCTTCTTTTCACTTGATGCACTTAGG
TCTAAGCGAGCGGCAGCCGC

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAHITLEAGSATMFRPGTSDTEIEASALKTMRRRKTLVRFWQIAILVFVIGMWELSSNMQWIDPFFYSSPSGVVQRLYEW
ATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKV
ALAFIMVFFVVFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ

Sequences:

>Translated_293_residues
MAHITLEAGSATMFRPGTSDTEIEASALKTMRRRKTLVRFWQIAILVFVIGMWELSSNMQWIDPFFYSSPSGVVQRLYEW
ATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKV
ALAFIMVFFVVFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ
>Mature_292_residues
AHITLEAGSATMFRPGTSDTEIEASALKTMRRRKTLVRFWQIAILVFVIGMWELSSNMQWIDPFFYSSPSGVVQRLYEWA
TEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLGRNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKVA
LAFIMVFFVVFANAFQGVREADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGIG
QLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=258, Percent_Identity=26.7441860465116, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786564, Length=245, Percent_Identity=26.530612244898, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32508; Mature: 32376

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHITLEAGSATMFRPGTSDTEIEASALKTMRRRKTLVRFWQIAILVFVIGMWELSSNMQ
CCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WIDPFFYSSPSGVVQRLYEWATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLG
HHCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKVALAFIMVFFVVFANAFQGVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
HHHHHHHHCCEEECCCCCEEEHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AHITLEAGSATMFRPGTSDTEIEASALKTMRRRKTLVRFWQIAILVFVIGMWELSSNMQ
CEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WIDPFFYSSPSGVVQRLYEWATEGTTEGSLWYNLWVTMEEALIGFFAGSITGVFVGIGLG
HHCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RNRFLSDIFSVYIKAINSIPRVVLAPIFIMIMGLGLPSKVALAFIMVFFVVFANAFQGVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EADRNMIANARILGASDWQVTRTVVIPSAMSWIFASLHVSFGFAIIGAIVGEFVGARFGI
HHHHHHHHCCEEECCCCCEEEHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
GQLISIAKGTFDAAGMFAAILLVMVVTLFAEYIMTLIENRLAKWRPQQHLDTQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]