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The map label for this gene is yurN [H]

Identifier: 116249327

GI number: 116249327

Start: 714671

End: 715627

Strand: Reverse

Name: yurN [H]

Synonym: pRL120664

Alternate gene names: 116249327

Gene position: 715627-714671 (Counterclockwise)

Preceding gene: 116249332

Following gene: 116249326

Centisome position: 82.25

GC content: 59.14

Gene sequence:

>957_bases
GTGTCCCTATCGAATTCGGTCATCGCGACGGATGGTGCTCCGGCAATCCCAAGCCGAAAGGCCGCCGTCTTGTCCAAGCG
CCAGCGCAGGATACGCAGCGCGCTCGTCGCCTATTCCTTCATTGCCCCGAATTTCATCGGCTTTGCCGTCTTCACGCTCG
GCCCGATCCTGTTCGCCTTCGTGCTCGCCTTCATGCATTGGGACGGTTCGAATGCGATCACCTTCGCCGGGCTGGATAAT
TTCTGGCGGCTCTTCGATGACAAGGCCTTTATCGCGGCGTTCTGGAACACAGTCATCTATACGGTCGCCTCCGTGCCGGC
GACGCTCATCTGCGCGCTCGGCCTCGCCGTTCTCCTCAATCAGAAGATCGCGGGGCGCGACTTCTTCCGCACGGCGATGT
TCTTCCCTTATGTCGCCTCGCTGGTGGCCGTCGCAGTCGTCTGGAACATGATCTTCAATCCCGAAATGGGACCGGTGAAC
ATGATCCTCTACACGCTCGGCCTCGATCCCAAGAACATGCCGGGATGGGCAGCCGATCGCCATTGGGCGATGGTGACGGT
GATCCTCTTCGGCATCTGGAAGAACATGGGCTATTACATGGTCATCTACCTGGCCGGCCTGCAGGGCATCAATTCGGAGC
TCTATGAGGCCGCCGATCTCGATGGCGCCAATTCCTGGCAGAAGTTCATCCATGTCACTGTGCCGCAGCTCGGGCCGACA
ACCTTCTTCGTCACCGTGATGCTGACGATCCAGTCCTTCAAGGTGTTCGATCAGATCTACATGATCACCCAGGGCGGGCC
CGGCACCTCGACGCTCGTCCTCGTCTACCACATCTACAACGAGGCCTTCATTTCCTGGGATCTCGGCTATTCGAGCATGG
TTGCGCTCGTTCTGTTCTTCCTCGTGCTCGCGGTCACCGTCTTCCAGTTCCGGCGCCAGAGGGAGGATGGCGAATGA

Upstream 100 bases:

>100_bases
GTATTTTTCGCTTTCCATAAAATTCGTATGATCTATTCAGAACTTGTTTGACCAATACCGGATATGTGCTATGTCGTTGC
GGGAGGAAGAGGAGGCATCG

Downstream 100 bases:

>100_bases
GGATCGCAGGACGCAAGGTCACCGTCAGATCGGTCGCGATCTACGCCATCGTCATCGCCGTCACGCTCATCATGCTGATG
CCCTTTGCCTGGATGCTATC

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSLSNSVIATDGAPAIPSRKAAVLSKRQRRIRSALVAYSFIAPNFIGFAVFTLGPILFAFVLAFMHWDGSNAITFAGLDN
FWRLFDDKAFIAAFWNTVIYTVASVPATLICALGLAVLLNQKIAGRDFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVN
MILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYYMVIYLAGLQGINSELYEAADLDGANSWQKFIHVTVPQLGPT
TFFVTVMLTIQSFKVFDQIYMITQGGPGTSTLVLVYHIYNEAFISWDLGYSSMVALVLFFLVLAVTVFQFRRQREDGE

Sequences:

>Translated_318_residues
MSLSNSVIATDGAPAIPSRKAAVLSKRQRRIRSALVAYSFIAPNFIGFAVFTLGPILFAFVLAFMHWDGSNAITFAGLDN
FWRLFDDKAFIAAFWNTVIYTVASVPATLICALGLAVLLNQKIAGRDFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVN
MILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYYMVIYLAGLQGINSELYEAADLDGANSWQKFIHVTVPQLGPT
TFFVTVMLTIQSFKVFDQIYMITQGGPGTSTLVLVYHIYNEAFISWDLGYSSMVALVLFFLVLAVTVFQFRRQREDGE
>Mature_317_residues
SLSNSVIATDGAPAIPSRKAAVLSKRQRRIRSALVAYSFIAPNFIGFAVFTLGPILFAFVLAFMHWDGSNAITFAGLDNF
WRLFDDKAFIAAFWNTVIYTVASVPATLICALGLAVLLNQKIAGRDFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVNM
ILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYYMVIYLAGLQGINSELYEAADLDGANSWQKFIHVTVPQLGPTT
FFVTVMLTIQSFKVFDQIYMITQGGPGTSTLVLVYHIYNEAFISWDLGYSSMVALVLFFLVLAVTVFQFRRQREDGE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=32.7586206896552, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1787570, Length=245, Percent_Identity=32.2448979591837, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1790465, Length=256, Percent_Identity=29.6875, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35513; Mature: 35382

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSNSVIATDGAPAIPSRKAAVLSKRQRRIRSALVAYSFIAPNFIGFAVFTLGPILFAF
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAFMHWDGSNAITFAGLDNFWRLFDDKAFIAAFWNTVIYTVASVPATLICALGLAVLLN
HHHHHHCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QKIAGRDFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVNMILYTLGLDPKNMPGWAADR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCCCCCCC
HWAMVTVILFGIWKNMGYYMVIYLAGLQGINSELYEAADLDGANSWQKFIHVTVPQLGPT
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHEEEECCCCCCH
TFFVTVMLTIQSFKVFDQIYMITQGGPGTSTLVLVYHIYNEAFISWDLGYSSMVALVLFF
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHEEEEEECCCHHEEECCCHHHHHHHHHHH
LVLAVTVFQFRRQREDGE
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLSNSVIATDGAPAIPSRKAAVLSKRQRRIRSALVAYSFIAPNFIGFAVFTLGPILFAF
CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAFMHWDGSNAITFAGLDNFWRLFDDKAFIAAFWNTVIYTVASVPATLICALGLAVLLN
HHHHHHCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QKIAGRDFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVNMILYTLGLDPKNMPGWAADR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCCCCCCCC
HWAMVTVILFGIWKNMGYYMVIYLAGLQGINSELYEAADLDGANSWQKFIHVTVPQLGPT
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHEEEECCCCCCH
TFFVTVMLTIQSFKVFDQIYMITQGGPGTSTLVLVYHIYNEAFISWDLGYSSMVALVLFF
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHEEEEEECCCHHEEECCCHHHHHHHHHHH
LVLAVTVFQFRRQREDGE
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]