| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249315
Identifier: 116249315
GI number: 116249315
Start: 704794
End: 705156
Strand: Direct
Name: 116249315
Synonym: pRL120652
Alternate gene names: NA
Gene position: 704794-705156 (Clockwise)
Preceding gene: 116249314
Following gene: 116249316
Centisome position: 81.01
GC content: 58.95
Gene sequence:
>363_bases ATGACGACTTTCAAATCCAGCGTGCCGCCCGAGAGCGGCACCGACGACGCGCGGTCCGCCGATACTGAACGGGCCGAGAC CGATCGCAAAAGGGCATTGGAAATTGCCCGGCGCAACGCCAGCTCGGCATTAGATCGTGATAGCGGCACCGAAACCGAAA CCCCAAGCCTGAAGCTTGCAAAGGAATATCTCAGCCTCGGCGGCCACCGCCGATCGATGATCGACGACAATATCACCGAT GTTCGCCAATGGGACGAGGATCCGCCGGAGGCCGAACGGTTCTGGAAGGAACGGGTGGAGACGCTTCCAAAGGATCAACG CAAGCAGGTGGAGGATTTTCTTCCAACCATCAACACGCCCTGA
Upstream 100 bases:
>100_bases ACCGGATGGCTACTCGATCCCCCGCTCAAATCAATCGCCCGCCACGCGGAACTCTCACTGTTTGCGAAGGTTATTGGATC ACAATATCGAAAGGTGATCC
Downstream 100 bases:
>100_bases AAGGGCGGCCGAGCCGCTCTTCGGACAGCTCATTCCAATGCGCGGAGCAGATCATGGCTATAGACAAGCACGAGCAGATA CGCCAGCGCGCCTACGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTTFKSSVPPESGTDDARSADTERAETDRKRALEIARRNASSALDRDSGTETETPSLKLAKEYLSLGGHRRSMIDDNITD VRQWDEDPPEAERFWKERVETLPKDQRKQVEDFLPTINTP
Sequences:
>Translated_120_residues MTTFKSSVPPESGTDDARSADTERAETDRKRALEIARRNASSALDRDSGTETETPSLKLAKEYLSLGGHRRSMIDDNITD VRQWDEDPPEAERFWKERVETLPKDQRKQVEDFLPTINTP >Mature_119_residues TTFKSSVPPESGTDDARSADTERAETDRKRALEIARRNASSALDRDSGTETETPSLKLAKEYLSLGGHRRSMIDDNITDV RQWDEDPPEAERFWKERVETLPKDQRKQVEDFLPTINTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13707; Mature: 13576
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFKSSVPPESGTDDARSADTERAETDRKRALEIARRNASSALDRDSGTETETPSLKLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KEYLSLGGHRRSMIDDNITDVRQWDEDPPEAERFWKERVETLPKDQRKQVEDFLPTINTP HHHHHHCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TTFKSSVPPESGTDDARSADTERAETDRKRALEIARRNASSALDRDSGTETETPSLKLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KEYLSLGGHRRSMIDDNITDVRQWDEDPPEAERFWKERVETLPKDQRKQVEDFLPTINTP HHHHHHCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA