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The map label for this gene is ygbK [C]

Identifier: 116249279

GI number: 116249279

Start: 667619

End: 668899

Strand: Reverse

Name: ygbK [C]

Synonym: pRL120614

Alternate gene names: 116249279

Gene position: 668899-667619 (Counterclockwise)

Preceding gene: 116249280

Following gene: 116249278

Centisome position: 76.88

GC content: 65.96

Gene sequence:

>1281_bases
ATGGCTATTTTCCTCGGATCAATCGCTGACGACTATACGGGCGCCTCCGACCTTGCCAACACACTGACGAAGAACGGCCT
GCGCACGGTGCAGACGGTCGGCATCCCCCACCCGTCGCTCGCCCTGCCGGATGTCGATGCCGTCGTCGTTTCCCTGAAGA
TCCGCTCCGTCCCGGCCTCGGACGCCGTGGCGGCTGCGGCGAGCGCCGAGCGATGGCTGCGCCAGCGGGGCGCCGGCCAT
GTGCTTTACAAGATCTGCTCGACTTTCGATTCCACCGATGCCGGCAATATCGGTCCGGTCACCGAGGCATTGAGCGAGGC
GGCCGGTGGCGGCGTCGTGCTGGTGACGCCCGCCTTTCCAGAAACAGGGCGCAGCGTCTATCTTGGCCATCTCTTCGTCG
GCGGACAACCGTTGAACGAAAGCCCGCTCAAGGACCACCCGCTCAATCCGATGCATGACGCCAATCTCGTTCGGGTTCTC
ACCCGCCAATCGCGCAACGCTGTCGGGCTGATCGATCTCACGACCATCGCGGCCGGACCCGGCGCCGTCAAGGCGAGGCT
CGATTCCTTTCGCACCGCAGGCGTCACCGCTGTTATCGCCGATGCGATTTTCGAACGGGATCTTGAAACGCTCGGCGAGG
TCGCTCTCGAAACGCCGGTGTCCACCGGTGCGTCCGGCCTCGGCCTCGGCCTGGCCCGTGCGCTCGTCCGCTCCGGCCGG
ATATCCTCCGGCGGCGCGACAACGGCGGACGCCATTCGCCCCGTGGGCGGACTTTCAGCGATCGTTGCCGGCAGTTGCTC
CAAGGCGACGCTCCATCAGCTCGACGTCGCCGAACGGTCGATGCCCGTCCTGCGGCTCGATCCGGAGCGGCTGCTTGCTG
GTCCGGATGAGATCGCCACGGCGATTTCCTGGGCCGGAGAGCGCATCTCCGCCGGCCCCGTCGTCATCGCCGCGAGTGCG
GCGCCTGAAACCGTATCCCGGCTGCAATCGCTGTACGGACGAGAGGCCTCCGGCCACGCGATCGAAACCGCGACGTCGAT
CATCGCAGCCGAACTGGTGGAGAGAGGCGTGCGGCGCCTTGTGATCGCCGGCGGTGAAACCTCGGGCGCTGCCGTCGACC
GGCTCGCCATTCCGGCATTTCTTATCGGCCCGGAGATTGCGCCCGGCGTGCCGGTGCTGCGCACCGTCGGCAATGCCCAG
GGCGATATGCTTCTGGCGTTGAAATCAGGAAACTTCGGAGGCGAAGATTTCTTTACGGCAGCGCTGGCGATGATGCACTG
A

Upstream 100 bases:

>100_bases
CCGCCTGGCTTATGACGGTTTCGTCGGCTGCGAATACATCCCGCGCGGCCACACACTGGACGGTCTTGGCTGGTTCAAAC
CTTTTGCACGGAGCTAGACG

Downstream 100 bases:

>100_bases
CGGGCCCCGGATCCGATGATATCGATCGGTTCTAGCATAAGATGCGGTGGCCGATGACAGCAAAGCCATAAGATACTGCT
TGAACCATGGCCTTCAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MAIFLGSIADDYTGASDLANTLTKNGLRTVQTVGIPHPSLALPDVDAVVVSLKIRSVPASDAVAAAASAERWLRQRGAGH
VLYKICSTFDSTDAGNIGPVTEALSEAAGGGVVLVTPAFPETGRSVYLGHLFVGGQPLNESPLKDHPLNPMHDANLVRVL
TRQSRNAVGLIDLTTIAAGPGAVKARLDSFRTAGVTAVIADAIFERDLETLGEVALETPVSTGASGLGLGLARALVRSGR
ISSGGATTADAIRPVGGLSAIVAGSCSKATLHQLDVAERSMPVLRLDPERLLAGPDEIATAISWAGERISAGPVVIAASA
APETVSRLQSLYGREASGHAIETATSIIAAELVERGVRRLVIAGGETSGAAVDRLAIPAFLIGPEIAPGVPVLRTVGNAQ
GDMLLALKSGNFGGEDFFTAALAMMH

Sequences:

>Translated_426_residues
MAIFLGSIADDYTGASDLANTLTKNGLRTVQTVGIPHPSLALPDVDAVVVSLKIRSVPASDAVAAAASAERWLRQRGAGH
VLYKICSTFDSTDAGNIGPVTEALSEAAGGGVVLVTPAFPETGRSVYLGHLFVGGQPLNESPLKDHPLNPMHDANLVRVL
TRQSRNAVGLIDLTTIAAGPGAVKARLDSFRTAGVTAVIADAIFERDLETLGEVALETPVSTGASGLGLGLARALVRSGR
ISSGGATTADAIRPVGGLSAIVAGSCSKATLHQLDVAERSMPVLRLDPERLLAGPDEIATAISWAGERISAGPVVIAASA
APETVSRLQSLYGREASGHAIETATSIIAAELVERGVRRLVIAGGETSGAAVDRLAIPAFLIGPEIAPGVPVLRTVGNAQ
GDMLLALKSGNFGGEDFFTAALAMMH
>Mature_425_residues
AIFLGSIADDYTGASDLANTLTKNGLRTVQTVGIPHPSLALPDVDAVVVSLKIRSVPASDAVAAAASAERWLRQRGAGHV
LYKICSTFDSTDAGNIGPVTEALSEAAGGGVVLVTPAFPETGRSVYLGHLFVGGQPLNESPLKDHPLNPMHDANLVRVLT
RQSRNAVGLIDLTTIAAGPGAVKARLDSFRTAGVTAVIADAIFERDLETLGEVALETPVSTGASGLGLGLARALVRSGRI
SSGGATTADAIRPVGGLSAIVAGSCSKATLHQLDVAERSMPVLRLDPERLLAGPDEIATAISWAGERISAGPVVIAASAA
PETVSRLQSLYGREASGHAIETATSIIAAELVERGVRRLVIAGGETSGAAVDRLAIPAFLIGPEIAPGVPVLRTVGNAQG
DMLLALKSGNFGGEDFFTAALAMMH

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=391, Percent_Identity=39.1304347826087, Blast_Score=259, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 43556; Mature: 43425

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFLGSIADDYTGASDLANTLTKNGLRTVQTVGIPHPSLALPDVDAVVVSLKIRSVPAS
CEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCH
DAVAAAASAERWLRQRGAGHVLYKICSTFDSTDAGNIGPVTEALSEAAGGGVVLVTPAFP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC
ETGRSVYLGHLFVGGQPLNESPLKDHPLNPMHDANLVRVLTRQSRNAVGLIDLTTIAAGP
CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCC
GAVKARLDSFRTAGVTAVIADAIFERDLETLGEVALETPVSTGASGLGLGLARALVRSGR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
ISSGGATTADAIRPVGGLSAIVAGSCSKATLHQLDVAERSMPVLRLDPERLLAGPDEIAT
CCCCCCCCHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECHHHHHCCHHHHHH
AISWAGERISAGPVVIAASAAPETVSRLQSLYGREASGHAIETATSIIAAELVERGVRRL
HHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEE
VIAGGETSGAAVDRLAIPAFLIGPEIAPGVPVLRTVGNAQGDMLLALKSGNFGGEDFFTA
EEECCCCCCCHHHHHHCCHHEECCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
ALAMMH
HHHHCC
>Mature Secondary Structure 
AIFLGSIADDYTGASDLANTLTKNGLRTVQTVGIPHPSLALPDVDAVVVSLKIRSVPAS
EEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCH
DAVAAAASAERWLRQRGAGHVLYKICSTFDSTDAGNIGPVTEALSEAAGGGVVLVTPAFP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC
ETGRSVYLGHLFVGGQPLNESPLKDHPLNPMHDANLVRVLTRQSRNAVGLIDLTTIAAGP
CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCC
GAVKARLDSFRTAGVTAVIADAIFERDLETLGEVALETPVSTGASGLGLGLARALVRSGR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
ISSGGATTADAIRPVGGLSAIVAGSCSKATLHQLDVAERSMPVLRLDPERLLAGPDEIAT
CCCCCCCCHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEECHHHHHCCHHHHHH
AISWAGERISAGPVVIAASAAPETVSRLQSLYGREASGHAIETATSIIAAELVERGVRRL
HHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEE
VIAGGETSGAAVDRLAIPAFLIGPEIAPGVPVLRTVGNAQGDMLLALKSGNFGGEDFFTA
EEECCCCCCCHHHHHHCCHHEECCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
ALAMMH
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]