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The map label for this gene is 116249259

Identifier: 116249259

GI number: 116249259

Start: 646036

End: 646674

Strand: Reverse

Name: 116249259

Synonym: pRL120594

Alternate gene names: NA

Gene position: 646674-646036 (Counterclockwise)

Preceding gene: 116249264

Following gene: 116249258

Centisome position: 74.33

GC content: 64.63

Gene sequence:

>639_bases
ATGGATGTCTCACGTCAACAGAACGAAACAGCCAGGACCGAGCGAGGCCCGCGTGCCCGAACGCGAAAACTGATGCTCGA
AACGGCAACGCGGCTCATGCAGTCCGGCATCACTCCGTCGGTAAGTGAAGTCGCCGAGGCTGCCGAAGTGTCGCGGGCGA
CGGCCTATCGTTACTTTCCGAGCCAGGCCGCGCTCGTGCATGCCGTGGTGGATGAGGCTCTGGGGCCGATACTCAGTTGG
TCGTCCGACAGTCCGGATGCACGCACCCGCGTTGCCGACCTCTTGGCGACCGCGATGCCGCGCATCGACGAGTTCGAGGC
CACCTTCAAGGCGGCGCTGAAACTTTCGCTGGACCAGTGGGCGCAGCGCCAGGCCGGCACGCTCGGCAACGAGCCGCTGT
TCAAGCGCGGCCACCGGATCGACCTGCTGAAGAGCGTGACTGCCCCCCTGCAGGGCACATTGCCGCCCGAATCCCGGGAA
CGCCTTGCACAGGCTCTTTCGCTTGTCTTCGGCGTCGAGGTGCTGATCGTATTGAAGGATATCTGGGGCCTGACCTCGGA
GGGCGCGCAGTCTGTTGCCGAGTGGGCGGCCAAGGCGCTAGTCGATACCGCATTACGGCAGGCAGGGAGCGAGGCATGA

Upstream 100 bases:

>100_bases
TTCCCCTCCGCGACCGGGTGGATTTCCTCCCGGCATATCTCACGTTCGGGGCAAAGCGACGGGCCCTTGCAAAATTGTGA
GACGTGCGTATCATAAAGAC

Downstream 100 bases:

>100_bases
CGTGGCGTGCCCAGACTTGGCGCACCAACTGGTTAGACCAATGCCGGTAATATATTCTTGTATTGTGGTCTGGATCGGCG
ATGATGAATGTGAGACGGAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr-Family Regulatory Protein; Transcriptional Regulator TetR-Family; Regulatory Protein TetR

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFPSQAALVHAVVDEALGPILSW
SSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQWAQRQAGTLGNEPLFKRGHRIDLLKSVTAPLQGTLPPESRE
RLAQALSLVFGVEVLIVLKDIWGLTSEGAQSVAEWAAKALVDTALRQAGSEA

Sequences:

>Translated_212_residues
MDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFPSQAALVHAVVDEALGPILSW
SSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQWAQRQAGTLGNEPLFKRGHRIDLLKSVTAPLQGTLPPESRE
RLAQALSLVFGVEVLIVLKDIWGLTSEGAQSVAEWAAKALVDTALRQAGSEA
>Mature_212_residues
MDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFPSQAALVHAVVDEALGPILSW
SSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQWAQRQAGTLGNEPLFKRGHRIDLLKSVTAPLQGTLPPESRE
RLAQALSLVFGVEVLIVLKDIWGLTSEGAQSVAEWAAKALVDTALRQAGSEA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23052; Mature: 23052

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFP
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SQAALVHAVVDEALGPILSWSSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQW
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AQRQAGTLGNEPLFKRGHRIDLLKSVTAPLQGTLPPESRERLAQALSLVFGVEVLIVLKD
HHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IWGLTSEGAQSVAEWAAKALVDTALRQAGSEA
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFP
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SQAALVHAVVDEALGPILSWSSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQW
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AQRQAGTLGNEPLFKRGHRIDLLKSVTAPLQGTLPPESRERLAQALSLVFGVEVLIVLKD
HHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IWGLTSEGAQSVAEWAAKALVDTALRQAGSEA
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA