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The map label for this gene is 116249248

Identifier: 116249248

GI number: 116249248

Start: 634140

End: 634697

Strand: Direct

Name: 116249248

Synonym: pRL120583

Alternate gene names: NA

Gene position: 634140-634697 (Clockwise)

Preceding gene: 116249246

Following gene: 116249250

Centisome position: 72.89

GC content: 58.96

Gene sequence:

>558_bases
TTGTTGATTATCACCCGTCATCGAGGTGACGGTGCAGCGGACACGACCCGTGATCCTGACGGCTCTCGCGGCGATCCTCG
CTTTCTTCCTCTGGCGCATTCTGTGTTCTGGGGGTCGATGGCCTATACGCCGATCGGCGAACGACCCCGTGATGATCCTG
CTCTTCCTTCCTACCCTCTACGCTGTGTGGTTTCGGATCACACCACCCAAAGTAGACGGGAAAGCGCAAGCGATCGAACG
TCAGGCGCAGCCGATGGCGCTCGCGGCGGAATAGGCGCCTTCGTGCCACGTACCATGATCCCGCGGGGCCGCTCGGGCAC
GGAAGTCGATATGTGGCGCCAACGTATACTCGATGTGGCGGAACAGCACTTTCGCCACATCGGTTTTCAGAAGACGACAG
TGGCCGATATTGCGAAATGCCTGAAAATGAGCAGCGCGAATGTATACCGTTTTCCCCTCCAGGATGGCGATAAATGCCTC
AATATCTCCCACTTTCAGACCGCCGATATCCGCAAGGCATCGCCCGCCGCCCGCCCGCCGATGTCCCTGGTTTCCTGA

Upstream 100 bases:

>100_bases
TCGGCCTCAACGCCATTCGGGTTGATAGGACTGGCCGGTATTTTGATGCGCAACACCCTGATCCTAACAGAGCAGATAAA
GGAGAACCGGGCGGCAGGCC

Downstream 100 bases:

>100_bases
GGGGGATGTCTCCTGAGCGGACGCCTTCGGAGATCTCTCCGATATGCCAGGGAACCTGGGTGCTCAATGAGAGCAGGCAG
AAGGTGATTGCTCAGGCTAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLIITRHRGDGAADTTRDPDGSRGDPRFLPLAHSVFWGSMAYTPIGERPRDDPALPSYPLRCVVSDHTTQSRRESASDRT
SGAADGARGGIGAFVPRTMIPRGRSGTEVDMWRQRILDVAEQHFRHIGFQKTTVADIAKCLKMSSANVYRFPLQDGDKCL
NISHFQTADIRKASPAARPPMSLVS

Sequences:

>Translated_185_residues
MLIITRHRGDGAADTTRDPDGSRGDPRFLPLAHSVFWGSMAYTPIGERPRDDPALPSYPLRCVVSDHTTQSRRESASDRT
SGAADGARGGIGAFVPRTMIPRGRSGTEVDMWRQRILDVAEQHFRHIGFQKTTVADIAKCLKMSSANVYRFPLQDGDKCL
NISHFQTADIRKASPAARPPMSLVS
>Mature_185_residues
MLIITRHRGDGAADTTRDPDGSRGDPRFLPLAHSVFWGSMAYTPIGERPRDDPALPSYPLRCVVSDHTTQSRRESASDRT
SGAADGARGGIGAFVPRTMIPRGRSGTEVDMWRQRILDVAEQHFRHIGFQKTTVADIAKCLKMSSANVYRFPLQDGDKCL
NISHFQTADIRKASPAARPPMSLVS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20362; Mature: 20362

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIITRHRGDGAADTTRDPDGSRGDPRFLPLAHSVFWGSMAYTPIGERPRDDPALPSYPL
CEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCEECCCCCCCCCCCCCCCCCCE
RCVVSDHTTQSRRESASDRTSGAADGARGGIGAFVPRTMIPRGRSGTEVDMWRQRILDVA
EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHHHH
EQHFRHIGFQKTTVADIAKCLKMSSANVYRFPLQDGDKCLNISHFQTADIRKASPAARPP
HHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCC
MSLVS
HHHCC
>Mature Secondary Structure
MLIITRHRGDGAADTTRDPDGSRGDPRFLPLAHSVFWGSMAYTPIGERPRDDPALPSYPL
CEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCEECCCCCCCCCCCCCCCCCCE
RCVVSDHTTQSRRESASDRTSGAADGARGGIGAFVPRTMIPRGRSGTEVDMWRQRILDVA
EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHHHH
EQHFRHIGFQKTTVADIAKCLKMSSANVYRFPLQDGDKCLNISHFQTADIRKASPAARPP
HHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCC
MSLVS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA