| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
Click here to switch to the map view.
The map label for this gene is opuAC [H]
Identifier: 116249195
GI number: 116249195
Start: 576689
End: 577540
Strand: Direct
Name: opuAC [H]
Synonym: pRL120531
Alternate gene names: 116249195
Gene position: 576689-577540 (Clockwise)
Preceding gene: 116249194
Following gene: 116249196
Centisome position: 66.28
GC content: 58.45
Gene sequence:
>852_bases ATGAAGACTTTGTGGAAGGCGCTCTGCGCTGCTGCGATGATCGGGGTCAGCATCCTTCCTGCTCGCGCGGAAGAAAAGAC GATCACCATGGGCACGATGTCGTGGGAGGACCTGACGCCCATCACCGGTATCACCAAGAAGGTTCTCGAAGACGCCGGCT ATACGGTCAAGGTGACCGAGTTCTCCGAATGGGGCATCGCCTATGCCGCTCTCGCCAAGGGTGACATCCAGGTCCTCACC TCCCAGACGGACTATGTTGCGCAGGACTACTGGGACAAGAACAAGAACCGGCTCGAGAAGATCTCACCCGTTTCGCACGG CCTCTATCAGGGCGTCGCGGTTCCTAAATATGTCCCGATCGACTCGCTGGAACAGCTCAATGAAAACGCCGACAAGTTCA GCGGCAAGATCATCGGTATCGAACCAGGCGCCGGCCTGATGCGCGATACTTCGAACGCGGTCAAGGATTATGGCCTCAAG CTCCAGCTCGTCGAGGGCAGCACCGCCGCGATGACGGCGGCGCTGAAGTCCGCCTATGATCGCAAGGAGTGGATTGCGGT GACGATCTGGGAGCCGTCCTGGATGGTCCAGAAGTACGAGGTCAAGTACCTCAAGGATCCGAAGGGCGTATTCCCGCCGC CGCAGAGCTATTACTGGATCGGCCACAAGGGCTTCTCCGCAGAGAACCCGCATGCGCGTGAAGTGATGGCCAGTGTCTAC GTGCCGATTGCCGACATCACCGCCATCAACGGCGCAGTCAATGAAGGCAAGACCATGGACCAAGCCGTGCAGGATTGGAT CGGCGCGCATGCCGACCTGATCAAGCGCTGGGAAAACATCAAGAAGAACTAA
Upstream 100 bases:
>100_bases TGCGTGCAGGCCGCGAGGGATGATCTCTCGCCGCGCAATATGAAGACTGCCCGCTCGCAGACTTCAATGACAATGGGAAC GAAAAACAGGAGTAAGAACA
Downstream 100 bases:
>100_bases ACGCGTCGTGGCCGTCCGATCCGTCGGGCGGCCACCCTGAAACCTAATGAAGAAGCCAGCGCTGAATGGCTCAATGGGGA TCGCTATGAAAACCGTAAAT
Product: putative substrate-binding component of ABC transporter
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKTLWKALCAAAMIGVSILPARAEEKTITMGTMSWEDLTPITGITKKVLEDAGYTVKVTEFSEWGIAYAALAKGDIQVLT SQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPIDSLEQLNENADKFSGKIIGIEPGAGLMRDTSNAVKDYGLK LQLVEGSTAAMTAALKSAYDRKEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSAENPHAREVMASVY VPIADITAINGAVNEGKTMDQAVQDWIGAHADLIKRWENIKKN
Sequences:
>Translated_283_residues MKTLWKALCAAAMIGVSILPARAEEKTITMGTMSWEDLTPITGITKKVLEDAGYTVKVTEFSEWGIAYAALAKGDIQVLT SQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPIDSLEQLNENADKFSGKIIGIEPGAGLMRDTSNAVKDYGLK LQLVEGSTAAMTAALKSAYDRKEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSAENPHAREVMASVY VPIADITAINGAVNEGKTMDQAVQDWIGAHADLIKRWENIKKN >Mature_283_residues MKTLWKALCAAAMIGVSILPARAEEKTITMGTMSWEDLTPITGITKKVLEDAGYTVKVTEFSEWGIAYAALAKGDIQVLT SQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPIDSLEQLNENADKFSGKIIGIEPGAGLMRDTSNAVKDYGLK LQLVEGSTAAMTAALKSAYDRKEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSAENPHAREVMASVY VPIADITAINGAVNEGKTMDQAVQDWIGAHADLIKRWENIKKN
Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 31407; Mature: 31407
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLWKALCAAAMIGVSILPARAEEKTITMGTMSWEDLTPITGITKKVLEDAGYTVKVTE CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE FSEWGIAYAALAKGDIQVLTSQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPI CCCCCCEEEHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCCCCCCH DSLEQLNENADKFSGKIIGIEPGAGLMRDTSNAVKDYGLKLQLVEGSTAAMTAALKSAYD HHHHHHHCCHHHHCCEEEEECCCCCCHHCCHHHHHHCCCEEEEECCCHHHHHHHHHHHCC RKEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSAENPHAREVMASVY CCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH VPIADITAINGAVNEGKTMDQAVQDWIGAHADLIKRWENIKKN CCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MKTLWKALCAAAMIGVSILPARAEEKTITMGTMSWEDLTPITGITKKVLEDAGYTVKVTE CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE FSEWGIAYAALAKGDIQVLTSQTDYVAQDYWDKNKNRLEKISPVSHGLYQGVAVPKYVPI CCCCCCEEEHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCCCCCCH DSLEQLNENADKFSGKIIGIEPGAGLMRDTSNAVKDYGLKLQLVEGSTAAMTAALKSAYD HHHHHHHCCHHHHCCEEEEECCCCCCHHCCHHHHHHCCCEEEEECCCHHHHHHHHHHHCC RKEWIAVTIWEPSWMVQKYEVKYLKDPKGVFPPPQSYYWIGHKGFSAENPHAREVMASVY CCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH VPIADITAINGAVNEGKTMDQAVQDWIGAHADLIKRWENIKKN CCHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7622480; 8969502; 9384377 [H]