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The map label for this gene is yidL [C]

Identifier: 116249159

GI number: 116249159

Start: 538452

End: 539351

Strand: Direct

Name: yidL [C]

Synonym: pRL120495

Alternate gene names: 116249159

Gene position: 538452-539351 (Clockwise)

Preceding gene: 116249150

Following gene: 116249165

Centisome position: 61.89

GC content: 63.33

Gene sequence:

>900_bases
TTGGCGACGGACGGGGGGATTCATCACTATGCCAGGGGCGAGTGGCACGCTCCGTCGCTGTCGCACCGGCGTATCCGTTT
CCAAAAGGGGATCTATGCCGATTTCCACCATTTCCTTCTGCTCGGCGAGGGGAGTGGGGAGCTTCATTTCGACAACGGCG
AACATCGGCCGCTGCACGGACCGCTGCTTGCCTTCCTGCCGCCGCAGGCGCGGTGCGACCTGTCGATATCAGCCGGAACC
GCGGCTCATCTGGTCGGCGCTTCGCCGCAGATCATGGTCGATGCGATCGGCGACAAGGTGGAATCCTATTCGCTGCGCAT
CTTCACCGAACAGCGAAAGCTGGTCGAGGCATTGGATCCCTTGACGGTCACTGAAATCCGCCCGCTGATCTCGGGCTTCG
TGCGGGAACTGGGCGATCCCACCCGCTCCTCCTGGATGGTCGCATCCGCCTATATCAGGCTCATCCTGATGGCGCTGTGG
CGCGGCTCCGATGGCGAGAGAAGCGAGCAGCGCGGGCAGGGCGAAGTGGGATCGATCCTGCAGAGATATCGGCAACTGGT
CGAAGCCGGCTTCCGCCAGCACCGGCCGATCAGCGATTATGCCGCGGAGCTGGGCGTCACAGCCGACCGGCTGCATTCCA
CCTGCCAAAGGGCGCTCGGCCGCTCGCCGATCCAGCTCCTGCATGAACGCGTGGTGCAGGAGGCGAAGCTTAGATTGGAG
CGATCGGCCCGCAATATCCAGGAAATCTCCGACAGCCTCGGCTTTCGCGACCCGACCTATTTCAGCCATTTCTTCAAGCG
CAAGACCGGCCTTTCACCCGCCGGCTACCGCGAGGTCGCCCGCGCCTCGGCCGGCTCGGAAAACAGCATGCTGTCCTCGG
GTTATGCGGATTGGCCTTAG

Upstream 100 bases:

>100_bases
GTTACGCCGATCTGGCGCGGATGGAATGCGATTTATTGGGTTAATATTGTAATTATCCGGCGTTTGCCGCATTGTTTGTC
ATGGGAGCGGAGGAGAAGCG

Downstream 100 bases:

>100_bases
GTTCGGGGCTCATTGGTCAAAGCAATGGCTTGCCAATCTCGGGTCACACAATCATGCTGCCGGAATCGTAAGCCGCGTAG
GACTGCGATGCGCCGGAAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator PobR; 4-Hydroxyphenylacetate Catabolism Regulatory Protein HpaA; Regulator Of 4HPA-Hydroxylase Operon; Transcriptional Regulatory Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; PobR Regulator; Transcriptional Regulator Pobr Arac Family Protein; AraC Family Regulatory Protein; AraC Family Transcriptional Regulatory Protein; Transcription Regulator AraC-Type; Transcriptional Regulatory Protein AraC-Type; AraC-Family Transcriptional Regulator; AraC/XylS Family Transcription Factor; AraC-Type Regulatory Protein; Helix-Turn-Helix AraC Type; Regulator Of 4hpa-Hydroxylase Operon; Transcriptional Regulator Protein; Transcription Regulator; AraC Family Transcription Regulator Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MATDGGIHHYARGEWHAPSLSHRRIRFQKGIYADFHHFLLLGEGSGELHFDNGEHRPLHGPLLAFLPPQARCDLSISAGT
AAHLVGASPQIMVDAIGDKVESYSLRIFTEQRKLVEALDPLTVTEIRPLISGFVRELGDPTRSSWMVASAYIRLILMALW
RGSDGERSEQRGQGEVGSILQRYRQLVEAGFRQHRPISDYAAELGVTADRLHSTCQRALGRSPIQLLHERVVQEAKLRLE
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREVARASAGSENSMLSSGYADWP

Sequences:

>Translated_299_residues
MATDGGIHHYARGEWHAPSLSHRRIRFQKGIYADFHHFLLLGEGSGELHFDNGEHRPLHGPLLAFLPPQARCDLSISAGT
AAHLVGASPQIMVDAIGDKVESYSLRIFTEQRKLVEALDPLTVTEIRPLISGFVRELGDPTRSSWMVASAYIRLILMALW
RGSDGERSEQRGQGEVGSILQRYRQLVEAGFRQHRPISDYAAELGVTADRLHSTCQRALGRSPIQLLHERVVQEAKLRLE
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREVARASAGSENSMLSSGYADWP
>Mature_298_residues
ATDGGIHHYARGEWHAPSLSHRRIRFQKGIYADFHHFLLLGEGSGELHFDNGEHRPLHGPLLAFLPPQARCDLSISAGTA
AHLVGASPQIMVDAIGDKVESYSLRIFTEQRKLVEALDPLTVTEIRPLISGFVRELGDPTRSSWMVASAYIRLILMALWR
GSDGERSEQRGQGEVGSILQRYRQLVEAGFRQHRPISDYAAELGVTADRLHSTCQRALGRSPIQLLHERVVQEAKLRLER
SARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREVARASAGSENSMLSSGYADWP

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33425; Mature: 33294

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDGGIHHYARGEWHAPSLSHRRIRFQKGIYADFHHFLLLGEGSGELHFDNGEHRPLHG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCCCEEECCCCCCCCCC
PLLAFLPPQARCDLSISAGTAAHLVGASPQIMVDAIGDKVESYSLRIFTEQRKLVEALDP
CHHEECCCCCCCCEEECCCCHHHHHCCCCCEEHHHHHCHHHHHEEEEEHHHHHHHHHHCC
LTVTEIRPLISGFVRELGDPTRSSWMVASAYIRLILMALWRGSDGERSEQRGQGEVGSIL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHH
QRYRQLVEAGFRQHRPISDYAAELGVTADRLHSTCQRALGRSPIQLLHERVVQEAKLRLE
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREVARASAGSENSMLSSGYADWP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
ATDGGIHHYARGEWHAPSLSHRRIRFQKGIYADFHHFLLLGEGSGELHFDNGEHRPLHG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCCCEEECCCCCCCCCC
PLLAFLPPQARCDLSISAGTAAHLVGASPQIMVDAIGDKVESYSLRIFTEQRKLVEALDP
CHHEECCCCCCCCEEECCCCHHHHHCCCCCEEHHHHHCHHHHHEEEEEHHHHHHHHHHCC
LTVTEIRPLISGFVRELGDPTRSSWMVASAYIRLILMALWRGSDGERSEQRGQGEVGSIL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHH
QRYRQLVEAGFRQHRPISDYAAELGVTADRLHSTCQRALGRSPIQLLHERVVQEAKLRLE
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREVARASAGSENSMLSSGYADWP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA