| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is impM
Identifier: 116249128
GI number: 116249128
Start: 497215
End: 498588
Strand: Reverse
Name: impM
Synonym: pRL120463
Alternate gene names: NA
Gene position: 498588-497215 (Counterclockwise)
Preceding gene: 116249129
Following gene: 116249127
Centisome position: 57.31
GC content: 64.7
Gene sequence:
>1374_bases ATGAACGAGCGCGCCACCCTGGACCGAAGCCCGACCGAAGCCGACAGGATCGGCTTCTTCGGCAAATTGCCGAGCCATGG CGATTTCGTTTCGATGGGACTGAGCCGCCACCTGCAGGCGGCACTAGACGCCTGGCTGCAGTCGGGGCTGCAAGCGTCTC AGCGGGAACTCGGCGAGGATTGGGAACGCCGGTTTCGCATGATGCCGGCATGGCGTTTTATCGTCGAACGCGGTCTTTGG GGATCTGCCACCATTGCCGGCGTTCTGCTTCCGAGCCTCGACCGCGTCGGGCGCAGTTTTCCGCTTGTGATCGCCGCCCA GCTTCACGGTTTTGCCGAGCATCCACGCCAGCTCTACCTTGATGACACCTGGTTCACGGCCGCCGAGGCGATCGCCGAAA GCTCGGCCAAGCGGGATTTCGACATCAATCACTTCACCGCGAGCCTGAAGCGACTGCGGACCCTGCGCCCGGCCGACCTC GGGGAAAACGAGACGCTGCAGGACAATGCTTCCGGCCGCGGCACGCTCTGGTGGCGGATCAGCCCCGAGGATCGGCGAGC CAAGGGGTTTCGTGTCGGCGGCGCCCCGGACCCCGAGGATTTTCCAAAGCTGCTGCACGACAATCCCCCCGCGGCTTCGG CACGGCCGCAACCCGAAACGGCCGAGACGCCGCGCCCTGTTGTCGTCGAGCCACATCATCCGCTGGTGATCCGCCACAGC CATGCCACGCATCCCGGCACGCGGCTGAGCGTCAACGCCGATGCGCTGCTCGTTTCGGAAACGCCCTCGCTCTTTGCCGT CGCCGATGGCGTCGGCGATGGCAACGCCGCTGCCGAGGTCGGCAAGATCGCCGTCCATATGCTGGCTGAAACCGGGAACC AGCAGACGATCGAAGCTCTGGTACAGGAGATCAAAGGCAAGCTCGGCCGCGCCCATGGCCTGCTTCAATCGGCCTATCTT TCCTCGGATCGCGAACCATCGGCCGCGAGCATCGTCGTGCTGGCCACGCGTGATGAGAGCTGCGCTCTGCTCTGGGTGGG TGACGCCCGTTGCTATCTTCTGCGGGACGGCATGATGCGCTGCCTCACGCGCGACCATGTGGAGATCGGCCTGCGGCGCA CGCTTTCGCGCGCCATCGGCATGCGCGGACATCTCGTCCCCGAAGTCCGTTCCGGCGGATTGCAGGCCGGCGACAGGCTG CTGCTCTGCAGCGCGCCGCTGCCGAGCGTCGTCCCCGAGCGGATCATCGCCGAAATCCTCCTTTCCGCAAAGATCGAAAA GGCCGCCGATATCCTCGTCCAGGAGGGGCTGATTGCCAATTGCCGCGAAAACCTCAGCGCAGTCGTGATCGATGTGAAGA CCGATGACAAATGA
Upstream 100 bases:
>100_bases GCAGCAGAGTTCGACGTGCAGTTCGGTTCGGTGCTCAATCCATTCCGGCTGGAGGCGCTCGGCGCCTTCTCATGCCCGGC GCAATTCTGACCGGTCTGAT
Downstream 100 bases:
>100_bases TCATCCTGCGGATTTCGAAGAGATCGCCCGACGTTTTTCGCATCTCTGGCAGGCGTTGAATCGCGGTTCACCCGAGACCC GGAAAATCCTGGTAGACCGC
Product: putative protein involved in nitrogen fixation
Products: NA
Alternate protein names: Protein Serine/Threonine Phosphatase; Protein Phosphatase PrpC; Serine/Threonine Phosphoprotein Phosphatase; Serine/Threonine Protein Phosphatase; Protein Serine/Threonine Phosphatases; Phosphoprotein Phosphatase; Protein Phosphatase ImpM; Protein Kinase; Protein Involved In Nitrogen Fixation; C Domain-Containing Protein; Serine/Threonine C Family
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MNERATLDRSPTEADRIGFFGKLPSHGDFVSMGLSRHLQAALDAWLQSGLQASQRELGEDWERRFRMMPAWRFIVERGLW GSATIAGVLLPSLDRVGRSFPLVIAAQLHGFAEHPRQLYLDDTWFTAAEAIAESSAKRDFDINHFTASLKRLRTLRPADL GENETLQDNASGRGTLWWRISPEDRRAKGFRVGGAPDPEDFPKLLHDNPPAASARPQPETAETPRPVVVEPHHPLVIRHS HATHPGTRLSVNADALLVSETPSLFAVADGVGDGNAAAEVGKIAVHMLAETGNQQTIEALVQEIKGKLGRAHGLLQSAYL SSDREPSAASIVVLATRDESCALLWVGDARCYLLRDGMMRCLTRDHVEIGLRRTLSRAIGMRGHLVPEVRSGGLQAGDRL LLCSAPLPSVVPERIIAEILLSAKIEKAADILVQEGLIANCRENLSAVVIDVKTDDK
Sequences:
>Translated_457_residues MNERATLDRSPTEADRIGFFGKLPSHGDFVSMGLSRHLQAALDAWLQSGLQASQRELGEDWERRFRMMPAWRFIVERGLW GSATIAGVLLPSLDRVGRSFPLVIAAQLHGFAEHPRQLYLDDTWFTAAEAIAESSAKRDFDINHFTASLKRLRTLRPADL GENETLQDNASGRGTLWWRISPEDRRAKGFRVGGAPDPEDFPKLLHDNPPAASARPQPETAETPRPVVVEPHHPLVIRHS HATHPGTRLSVNADALLVSETPSLFAVADGVGDGNAAAEVGKIAVHMLAETGNQQTIEALVQEIKGKLGRAHGLLQSAYL SSDREPSAASIVVLATRDESCALLWVGDARCYLLRDGMMRCLTRDHVEIGLRRTLSRAIGMRGHLVPEVRSGGLQAGDRL LLCSAPLPSVVPERIIAEILLSAKIEKAADILVQEGLIANCRENLSAVVIDVKTDDK >Mature_457_residues MNERATLDRSPTEADRIGFFGKLPSHGDFVSMGLSRHLQAALDAWLQSGLQASQRELGEDWERRFRMMPAWRFIVERGLW GSATIAGVLLPSLDRVGRSFPLVIAAQLHGFAEHPRQLYLDDTWFTAAEAIAESSAKRDFDINHFTASLKRLRTLRPADL GENETLQDNASGRGTLWWRISPEDRRAKGFRVGGAPDPEDFPKLLHDNPPAASARPQPETAETPRPVVVEPHHPLVIRHS HATHPGTRLSVNADALLVSETPSLFAVADGVGDGNAAAEVGKIAVHMLAETGNQQTIEALVQEIKGKLGRAHGLLQSAYL SSDREPSAASIVVLATRDESCALLWVGDARCYLLRDGMMRCLTRDHVEIGLRRTLSRAIGMRGHLVPEVRSGGLQAGDRL LLCSAPLPSVVPERIIAEILLSAKIEKAADILVQEGLIANCRENLSAVVIDVKTDDK
Specific function: Unknown
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49994; Mature: 49994
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERATLDRSPTEADRIGFFGKLPSHGDFVSMGLSRHLQAALDAWLQSGLQASQRELGED CCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WERRFRMMPAWRFIVERGLWGSATIAGVLLPSLDRVGRSFPLVIAAQLHGFAEHPRQLYL HHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCEEEE DDTWFTAAEAIAESSAKRDFDINHFTASLKRLRTLRPADLGENETLQDNASGRGTLWWRI CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE SPEDRRAKGFRVGGAPDPEDFPKLLHDNPPAASARPQPETAETPRPVVVEPHHPLVIRHS CCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEC HATHPGTRLSVNADALLVSETPSLFAVADGVGDGNAAAEVGKIAVHMLAETGNQQTIEAL CCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VQEIKGKLGRAHGLLQSAYLSSDREPSAASIVVLATRDESCALLWVGDARCYLLRDGMMR HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEHHHHHHH CLTRDHVEIGLRRTLSRAIGMRGHLVPEVRSGGLQAGDRLLLCSAPLPSVVPERIIAEIL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH LSAKIEKAADILVQEGLIANCRENLSAVVIDVKTDDK HHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCC >Mature Secondary Structure MNERATLDRSPTEADRIGFFGKLPSHGDFVSMGLSRHLQAALDAWLQSGLQASQRELGED CCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WERRFRMMPAWRFIVERGLWGSATIAGVLLPSLDRVGRSFPLVIAAQLHGFAEHPRQLYL HHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCEEEE DDTWFTAAEAIAESSAKRDFDINHFTASLKRLRTLRPADLGENETLQDNASGRGTLWWRI CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE SPEDRRAKGFRVGGAPDPEDFPKLLHDNPPAASARPQPETAETPRPVVVEPHHPLVIRHS CCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEC HATHPGTRLSVNADALLVSETPSLFAVADGVGDGNAAAEVGKIAVHMLAETGNQQTIEAL CCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VQEIKGKLGRAHGLLQSAYLSSDREPSAASIVVLATRDESCALLWVGDARCYLLRDGMMR HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEHHHHHHH CLTRDHVEIGLRRTLSRAIGMRGHLVPEVRSGGLQAGDRLLLCSAPLPSVVPERIIAEIL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH LSAKIEKAADILVQEGLIANCRENLSAVVIDVKTDDK HHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA