| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is hyuE [H]
Identifier: 116249095
GI number: 116249095
Start: 462328
End: 463008
Strand: Reverse
Name: hyuE [H]
Synonym: pRL120429
Alternate gene names: 116249095
Gene position: 463008-462328 (Counterclockwise)
Preceding gene: 116249096
Following gene: 116249094
Centisome position: 53.22
GC content: 60.35
Gene sequence:
>681_bases ATGACACACATCGTTATCATCAATCCAAACACATCGGAGGCGACCACGGCGATGATGACCGACATCGCTCGCCAGTCTGT TCCCGCTGGCATTTCGGTCGAAGGCGTGACCGCGGCAAGAGGCGTGCCGATGATCCTCAACGGCAATGAGCTTGCCGCCT CCGCCGACGGCGTCGTGCAGATGGGGTTGACCGCGGCGTCAAGGGCTGATGGCATCATCGTCAGCGCTTTCGGGGATCCG GGGCTCGAACCGCTGAGACAAATGACCGATATACCCATTATCGGCATATGCGAGGCAAGCATGCTGGAAGCTGCGTTCGG CGGACGACGGTTCGGCATTGCGACAGTCACACCAGATCTCGTCGAGAGCTTCGCGGCAAAGGCAGTGAGCCTCGGGCTTG CCAACCTTTTCACCGGCACTCGATTGACCAGTGGGGACCCAATCTCTCTCTCCTTCGAGCCAGAGCGGCTGCAGACAGCC CTCGCCATTGCCGTCAAAGAGTGCCTGGATTTTGATGGCGCCGAGGTGGTCATCATCGGCGGCGGGCCGCTTGGCAGAGC AGCGGCCCAACTTCAGCAGCAGCTGTCCGCGCCAGTGATCGCCCCGATTGAATCAGCCACTAAACTCCTCCTCAAGCGGA TGTTTCCTCTCGCATCAGTCGCTGCGAGTTTGGCGCAGTGA
Upstream 100 bases:
>100_bases GGACGAGCTGGCCGGGTTGCCTGCCTTCTATACGGCTGAGAAACCCGAAAAATACAATAAATCAGGGAGGTGGACGCGCG GCTGCGGCGTCCGAAGGACC
Downstream 100 bases:
>100_bases CAAGGGCGCTCGGGCGCGGCAGCTTGAGTTTTCCGATTGCAAATCGGGAGATTGCGACGGAAAGTCCGCCGCCTGGAGAT GTCGCGGAGAGTACTGTGCC
Product: putative hydantoin racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTHIVIINPNTSEATTAMMTDIARQSVPAGISVEGVTAARGVPMILNGNELAASADGVVQMGLTAASRADGIIVSAFGDP GLEPLRQMTDIPIIGICEASMLEAAFGGRRFGIATVTPDLVESFAAKAVSLGLANLFTGTRLTSGDPISLSFEPERLQTA LAIAVKECLDFDGAEVVIIGGGPLGRAAAQLQQQLSAPVIAPIESATKLLLKRMFPLASVAASLAQ
Sequences:
>Translated_226_residues MTHIVIINPNTSEATTAMMTDIARQSVPAGISVEGVTAARGVPMILNGNELAASADGVVQMGLTAASRADGIIVSAFGDP GLEPLRQMTDIPIIGICEASMLEAAFGGRRFGIATVTPDLVESFAAKAVSLGLANLFTGTRLTSGDPISLSFEPERLQTA LAIAVKECLDFDGAEVVIIGGGPLGRAAAQLQQQLSAPVIAPIESATKLLLKRMFPLASVAASLAQ >Mature_225_residues THIVIINPNTSEATTAMMTDIARQSVPAGISVEGVTAARGVPMILNGNELAASADGVVQMGLTAASRADGIIVSAFGDPG LEPLRQMTDIPIIGICEASMLEAAFGGRRFGIATVTPDLVESFAAKAVSLGLANLFTGTRLTSGDPISLSFEPERLQTAL AIAVKECLDFDGAEVVIIGGGPLGRAAAQLQQQLSAPVIAPIESATKLLLKRMFPLASVAASLAQ
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 23169; Mature: 23038
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHIVIINPNTSEATTAMMTDIARQSVPAGISVEGVTAARGVPMILNGNELAASADGVVQ CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHCCCEEEECCCCCCCCCCCCEE MGLTAASRADGIIVSAFGDPGLEPLRQMTDIPIIGICEASMLEAAFGGRRFGIATVTPDL ECCHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEECHHHHHHHHHCCCEEEEEECCHHH VESFAAKAVSLGLANLFTGTRLTSGDPISLSFEPERLQTALAIAVKECLDFDGAEVVIIG HHHHHHHHHHHHHHHHHCCCEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEC GGPLGRAAAQLQQQLSAPVIAPIESATKLLLKRMFPLASVAASLAQ CCCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THIVIINPNTSEATTAMMTDIARQSVPAGISVEGVTAARGVPMILNGNELAASADGVVQ EEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHCCCEEEECCCCCCCCCCCCEE MGLTAASRADGIIVSAFGDPGLEPLRQMTDIPIIGICEASMLEAAFGGRRFGIATVTPDL ECCHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEECHHHHHHHHHCCCEEEEEECCHHH VESFAAKAVSLGLANLFTGTRLTSGDPISLSFEPERLQTALAIAVKECLDFDGAEVVIIG HHHHHHHHHHHHHHHHHCCCEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEC GGPLGRAAAQLQQQLSAPVIAPIESATKLLLKRMFPLASVAASLAQ CCCCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]