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The map label for this gene is dadA

Identifier: 116249083

GI number: 116249083

Start: 451379

End: 452629

Strand: Direct

Name: dadA

Synonym: pRL120417

Alternate gene names: 116249083

Gene position: 451379-452629 (Clockwise)

Preceding gene: 116249082

Following gene: 116249084

Centisome position: 51.88

GC content: 63.15

Gene sequence:

>1251_bases
ATGAAGGTCATCGTTCTAGGAGCCGGCATCGTCGGCGTTACATCCGCTTATCAACTGGCCAAGGCCGGTCATGACGTCAC
GGTCGTCGACCGGCAGCCGGGTCCGGCACTGGAGACGAGCTTTGCCAATGCCGGCGAAGTCTCCTTCGGCTATTGCTCGC
CATGGGCAGCGCCCGGCATTCCTATGAAGGCCATGAAGTGGCTGTTCATGAAACATGCGCCGCTCATCCTGCGCCCAAAA
TTAGACATGGCCATGCTTTCCTGGATGGCGAGGATGCTGTCGAACTGCACCTCCGAGCGTTACGCGATCAACAAGAGCCG
CATGCTGCGCCTTGCCGATTACAGCCGCATCGCGCTGGCCGATCTTCGCGCCGAGACCGGCATCGCCTATGATGAACGCA
TGCAGGGAACCCTGCAGCTGTTCCGCACGCAGCAGCAGCTCGAGGCCTCGGCAAAGGATGTCAAGGCGCTGGCTGCCGAC
GGCATTCCCTATGAGGTGCTGGACCGGGACGGCTGCATCCGCTTCGAACCGGCGCTGAAGCATGTGCGCGACAAGATTGT
CGGCGGTCTGCTGACGCCGAAGGACGAAACCGGCGATTGCTTCAAGTTCACCAATGCGCTGGCGGCCAAAGCCGAGGCGC
TCGGCGTCCGTTTCGCTTACGGGACGACGATCAAGGCGCTGGATGTCGAGGCCGGCCGCGTGCGTGGGGTCATCACCGAT
CGTGAAAGGATGAGTGCGGAGGCGGTGGTGGTCGCGCTCGGCAGCTATTCGCCGCTGCTGCTCAAGCCGCTCGGCATCCG
GCTGCCGGTCTATCCCGTCAAGGGCTATTCGCTCACCATCCCGATCGCCGATGCGTCACGCGCGCCGGAATCGACTGTGA
TGGACGAGACCTACAAGATCGCGATCACCCGGCTCGGCGATCGCATTCGTGTCGGCGGCATGGCTGAAATATCAGGCTAT
ACCAATGATCTCGGCCTGGCCCGTCGCAGCACGCTGGAATATTCGGTCACCGATCTCTTCCCCGGCGGCGATATTTCCAA
GGCCTCCTTCTGGTCCGGCCTGCGCCCGATGACGCCTGATGGCACGCCGGTTATCGGCCCGACAAAGGTCGCCGGTCTCT
TCCTCAATACCGGCCACGGCACGCTCGGCTGGACGATGAGCACCGGTTCGGCGCGGCTCATCGGCGATCTCGTCGGCGGC
GGCCAGCCGGAAATCGACGCGAGGGATCTCGCCATCACCCGCTACGGCTGA

Upstream 100 bases:

>100_bases
GCGATGCCGGCACCATTTCTTACGAAATCCTAACTGGCCTGGGCGATCGTTACGACAGGCAATATCGCTAAGAGCCGGCG
GCTCCATCATTGGGGACATC

Downstream 100 bases:

>100_bases
AACCCGGGGCAACACAGAAAAAGAGGGATGAACATGATTGCGCAAATCCATTATCACTTGTGTACATCGCCTTTCGAGGT
CACGAATGTCCGTTAATTCT

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKVIVLGAGIVGVTSAYQLAKAGHDVTVVDRQPGPALETSFANAGEVSFGYCSPWAAPGIPMKAMKWLFMKHAPLILRPK
LDMAMLSWMARMLSNCTSERYAINKSRMLRLADYSRIALADLRAETGIAYDERMQGTLQLFRTQQQLEASAKDVKALAAD
GIPYEVLDRDGCIRFEPALKHVRDKIVGGLLTPKDETGDCFKFTNALAAKAEALGVRFAYGTTIKALDVEAGRVRGVITD
RERMSAEAVVVALGSYSPLLLKPLGIRLPVYPVKGYSLTIPIADASRAPESTVMDETYKIAITRLGDRIRVGGMAEISGY
TNDLGLARRSTLEYSVTDLFPGGDISKASFWSGLRPMTPDGTPVIGPTKVAGLFLNTGHGTLGWTMSTGSARLIGDLVGG
GQPEIDARDLAITRYG

Sequences:

>Translated_416_residues
MKVIVLGAGIVGVTSAYQLAKAGHDVTVVDRQPGPALETSFANAGEVSFGYCSPWAAPGIPMKAMKWLFMKHAPLILRPK
LDMAMLSWMARMLSNCTSERYAINKSRMLRLADYSRIALADLRAETGIAYDERMQGTLQLFRTQQQLEASAKDVKALAAD
GIPYEVLDRDGCIRFEPALKHVRDKIVGGLLTPKDETGDCFKFTNALAAKAEALGVRFAYGTTIKALDVEAGRVRGVITD
RERMSAEAVVVALGSYSPLLLKPLGIRLPVYPVKGYSLTIPIADASRAPESTVMDETYKIAITRLGDRIRVGGMAEISGY
TNDLGLARRSTLEYSVTDLFPGGDISKASFWSGLRPMTPDGTPVIGPTKVAGLFLNTGHGTLGWTMSTGSARLIGDLVGG
GQPEIDARDLAITRYG
>Mature_416_residues
MKVIVLGAGIVGVTSAYQLAKAGHDVTVVDRQPGPALETSFANAGEVSFGYCSPWAAPGIPMKAMKWLFMKHAPLILRPK
LDMAMLSWMARMLSNCTSERYAINKSRMLRLADYSRIALADLRAETGIAYDERMQGTLQLFRTQQQLEASAKDVKALAAD
GIPYEVLDRDGCIRFEPALKHVRDKIVGGLLTPKDETGDCFKFTNALAAKAEALGVRFAYGTTIKALDVEAGRVRGVITD
RERMSAEAVVVALGSYSPLLLKPLGIRLPVYPVKGYSLTIPIADASRAPESTVMDETYKIAITRLGDRIRVGGMAEISGY
TNDLGLARRSTLEYSVTDLFPGGDISKASFWSGLRPMTPDGTPVIGPTKVAGLFLNTGHGTLGWTMSTGSARLIGDLVGG
GQPEIDARDLAITRYG

Specific function: Oxidative deamination of D-amino acids

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=54.5673076923077, Blast_Score=464, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_RHIL3 (Q9RAE6)

Other databases:

- EMBL:   AJ249196
- EMBL:   AM236086
- RefSeq:   YP_764924.1
- ProteinModelPortal:   Q9RAE6
- STRING:   Q9RAE6
- GeneID:   4398233
- GenomeReviews:   AM236086_GR
- KEGG:   rle:pRL120417
- NMPDR:   fig|216596.1.peg.6121
- eggNOG:   COG0665
- HOGENOM:   HBG729204
- OMA:   WQMLQNC
- PhylomeDB:   Q9RAE6
- ProtClustDB:   PRK00711
- BioCyc:   RLEG216596:PRL120417-MONOMER
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 44838; Mature: 44838

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIVLGAGIVGVTSAYQLAKAGHDVTVVDRQPGPALETSFANAGEVSFGYCSPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCCCEECCCCCCCCCCC
PMKAMKWLFMKHAPLILRPKLDMAMLSWMARMLSNCTSERYAINKSRMLRLADYSRIALA
CHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHEEECHHHEEEEECCCHHHHH
DLRAETGIAYDERMQGTLQLFRTQQQLEASAKDVKALAADGIPYEVLDRDGCIRFEPALK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHH
HVRDKIVGGLLTPKDETGDCFKFTNALAAKAEALGVRFAYGTTIKALDVEAGRVRGVITD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCEEEEEEC
RERMSAEAVVVALGSYSPLLLKPLGIRLPVYPVKGYSLTIPIADASRAPESTVMDETYKI
HHHCCCEEEEEEECCCCCEEECCCCCEEEEEEECCEEEEEEECCCCCCCCCHHCCCCEEE
AITRLGDRIRVGGMAEISGYTNDLGLARRSTLEYSVTDLFPGGDISKASFWSGLRPMTPD
EEEECCCEEEECCEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCCCC
GTPVIGPTKVAGLFLNTGHGTLGWTMSTGSARLIGDLVGGGQPEIDARDLAITRYG
CCCCCCCHHEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKVIVLGAGIVGVTSAYQLAKAGHDVTVVDRQPGPALETSFANAGEVSFGYCSPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCCCEECCCCCCCCCCC
PMKAMKWLFMKHAPLILRPKLDMAMLSWMARMLSNCTSERYAINKSRMLRLADYSRIALA
CHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHEEECHHHEEEEECCCHHHHH
DLRAETGIAYDERMQGTLQLFRTQQQLEASAKDVKALAADGIPYEVLDRDGCIRFEPALK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHH
HVRDKIVGGLLTPKDETGDCFKFTNALAAKAEALGVRFAYGTTIKALDVEAGRVRGVITD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCEEEEEEC
RERMSAEAVVVALGSYSPLLLKPLGIRLPVYPVKGYSLTIPIADASRAPESTVMDETYKI
HHHCCCEEEEEEECCCCCEEECCCCCEEEEEEECCEEEEEEECCCCCCCCCHHCCCCEEE
AITRLGDRIRVGGMAEISGYTNDLGLARRSTLEYSVTDLFPGGDISKASFWSGLRPMTPD
EEEECCCEEEECCEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCCCC
GTPVIGPTKVAGLFLNTGHGTLGWTMSTGSARLIGDLVGGGQPEIDARDLAITRYG
CCCCCCCHHEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10792736