| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is livG [H]
Identifier: 116249073
GI number: 116249073
Start: 440292
End: 441065
Strand: Direct
Name: livG [H]
Synonym: pRL120407
Alternate gene names: 116249073
Gene position: 440292-441065 (Clockwise)
Preceding gene: 116249072
Following gene: 116249074
Centisome position: 50.61
GC content: 58.66
Gene sequence:
>774_bases ATGACCAGTCATCTTCCGCTTCTCGAGATCAAGAACCTCAGCAAGTCCTACGGTGCGGTCAAGGCCGTCAACGATGTCAG CATTCACATCGATCGAGGTGAGATCGCGGGCCTGATCGGACCGAACGGCTCCGGCAAGTCGACCTTCTTCGATTGCAGCA CCGGCCTTGCAAAGCCAGACACCGGCACGGTCGTCCTTGATGGACAGGATATCACCGGTTGGTCCTTGAACCGCATCGCC AGGGAAGGTCGCATGCTGCGGTCTTTCCAGAAGACCGTCACTTTCCGGTCGCTCGATGTCGAGGAGAACCTGGTCATCGC CGGTCAGATGTTCACCTTCCCGTCCATCACCTCGACCTTCGGTCTCGGAAAGATGTCCCGGCAGCGCGTCGGTGGTCTCC GGGAGCGAGCTCGCGACCTCATCAAGATGGCGGGTCTTTGGGATGTGCGCCATCAGCCGGCGGGCAATCTGTCGGGCGGA CAGCAGAAACTTATCCAGTTCGCATCCATGTTGATGCCCGAACCGAAGCTCATCCTGCTGGATGAGCCGATGGCCGGCAT CAATCCGAAGATCATCGAACGCGTCGTCGACACCATCCGTTATGCGAACAAGTCGCTTGGCGTGAGCTTCCTGGTGATCG AGCATAATATCGATGTCGTCACCAGCATCTGCCAGCGCGTCATCGTGCTCGACCAGGGAGCCAAGCTCGTCGAAGGCTTG CCAGGCGACATCATTCAGGATCAGCGCGTCAGGGAGGCCTATCTTGGAGGGTAA
Upstream 100 bases:
>100_bases TGATCGCCTATGGTGTCTGCCTTCTCGTCCTCGTCTTCTGGTTCAAGAAGGGCTGCGCGCCGCTGATCAATCGTTTCTGG AATGCGATTGGAGGCGCGAA
Downstream 100 bases:
>100_bases CTCGCAACTTTTGATCCGCGACCTGCGCGCAGGTTACGGCAATCTGGATATTCTGAACGGCGTCGATCTCGACGTGCCCG CCGGACAGTTCGTGGCGCTC
Product: putative nucleotide binding protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTSHLPLLEIKNLSKSYGAVKAVNDVSIHIDRGEIAGLIGPNGSGKSTFFDCSTGLAKPDTGTVVLDGQDITGWSLNRIA REGRMLRSFQKTVTFRSLDVEENLVIAGQMFTFPSITSTFGLGKMSRQRVGGLRERARDLIKMAGLWDVRHQPAGNLSGG QQKLIQFASMLMPEPKLILLDEPMAGINPKIIERVVDTIRYANKSLGVSFLVIEHNIDVVTSICQRVIVLDQGAKLVEGL PGDIIQDQRVREAYLGG
Sequences:
>Translated_257_residues MTSHLPLLEIKNLSKSYGAVKAVNDVSIHIDRGEIAGLIGPNGSGKSTFFDCSTGLAKPDTGTVVLDGQDITGWSLNRIA REGRMLRSFQKTVTFRSLDVEENLVIAGQMFTFPSITSTFGLGKMSRQRVGGLRERARDLIKMAGLWDVRHQPAGNLSGG QQKLIQFASMLMPEPKLILLDEPMAGINPKIIERVVDTIRYANKSLGVSFLVIEHNIDVVTSICQRVIVLDQGAKLVEGL PGDIIQDQRVREAYLGG >Mature_256_residues TSHLPLLEIKNLSKSYGAVKAVNDVSIHIDRGEIAGLIGPNGSGKSTFFDCSTGLAKPDTGTVVLDGQDITGWSLNRIAR EGRMLRSFQKTVTFRSLDVEENLVIAGQMFTFPSITSTFGLGKMSRQRVGGLRERARDLIKMAGLWDVRHQPAGNLSGGQ QKLIQFASMLMPEPKLILLDEPMAGINPKIIERVVDTIRYANKSLGVSFLVIEHNIDVVTSICQRVIVLDQGAKLVEGLP GDIIQDQRVREAYLGG
Specific function: Probable component of a branched-chain amino-acid transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=229, Percent_Identity=27.9475982532751, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI30795238, Length=229, Percent_Identity=27.9475982532751, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI105990541, Length=240, Percent_Identity=27.0833333333333, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI45446740, Length=243, Percent_Identity=27.1604938271605, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI47078218, Length=243, Percent_Identity=27.1604938271605, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI171184400, Length=234, Percent_Identity=29.4871794871795, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI31657092, Length=251, Percent_Identity=25.8964143426295, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI27477115, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI27262624, Length=217, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI27262626, Length=217, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI150417984, Length=231, Percent_Identity=25.1082251082251, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI153792144, Length=243, Percent_Identity=23.0452674897119, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI21536376, Length=229, Percent_Identity=26.6375545851528, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI116734710, Length=230, Percent_Identity=25.6521739130435, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI27436953, Length=240, Percent_Identity=25.8333333333333, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789864, Length=251, Percent_Identity=34.6613545816733, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI87082268, Length=251, Percent_Identity=32.2709163346614, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1789593, Length=252, Percent_Identity=34.5238095238095, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1786398, Length=237, Percent_Identity=29.1139240506329, Blast_Score=117, Evalue=5e-28, Organism=Escherichia coli, GI1790544, Length=241, Percent_Identity=30.2904564315353, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI87081791, Length=246, Percent_Identity=29.6747967479675, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1787029, Length=253, Percent_Identity=26.4822134387352, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1788761, Length=229, Percent_Identity=27.0742358078603, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87081709, Length=252, Percent_Identity=25, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1787370, Length=245, Percent_Identity=24.8979591836735, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1786872, Length=242, Percent_Identity=29.7520661157025, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789672, Length=255, Percent_Identity=26.6666666666667, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788450, Length=236, Percent_Identity=27.9661016949153, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788225, Length=242, Percent_Identity=25.2066115702479, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI48995001, Length=232, Percent_Identity=29.7413793103448, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787712, Length=226, Percent_Identity=28.7610619469027, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=32.093023255814, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87081782, Length=239, Percent_Identity=28.4518828451883, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1790739, Length=249, Percent_Identity=29.3172690763052, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789991, Length=232, Percent_Identity=28.0172413793103, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=27.8481012658228, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790525, Length=246, Percent_Identity=24.7967479674797, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786253, Length=235, Percent_Identity=25.9574468085106, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786345, Length=245, Percent_Identity=24.4897959183673, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI48994997, Length=251, Percent_Identity=26.2948207171315, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787759, Length=262, Percent_Identity=28.2442748091603, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789586, Length=258, Percent_Identity=28.2945736434109, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786319, Length=232, Percent_Identity=26.2931034482759, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788644, Length=247, Percent_Identity=29.1497975708502, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788897, Length=234, Percent_Identity=25.6410256410256, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1787792, Length=248, Percent_Identity=25.4032258064516, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1786803, Length=254, Percent_Identity=25.5905511811024, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787105, Length=234, Percent_Identity=29.0598290598291, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789032, Length=267, Percent_Identity=26.5917602996255, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI48994943, Length=252, Percent_Identity=25, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789962, Length=263, Percent_Identity=26.615969581749, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788472, Length=228, Percent_Identity=27.6315789473684, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786563, Length=236, Percent_Identity=25, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790162, Length=219, Percent_Identity=26.027397260274, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787547, Length=250, Percent_Identity=25.2, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1790190, Length=241, Percent_Identity=26.1410788381743, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=27.7533039647577, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788210, Length=243, Percent_Identity=25.1028806584362, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789891, Length=239, Percent_Identity=27.1966527196653, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1789873, Length=233, Percent_Identity=27.0386266094421, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=23.4513274336283, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI145693107, Length=245, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI87082267, Length=240, Percent_Identity=21.25, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367384, Length=255, Percent_Identity=27.0588235294118, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI48994883, Length=247, Percent_Identity=25.5060728744939, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1788053, Length=219, Percent_Identity=27.8538812785388, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=228, Percent_Identity=26.7543859649123, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789963, Length=245, Percent_Identity=25.3061224489796, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786703, Length=239, Percent_Identity=25.9414225941423, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787041, Length=234, Percent_Identity=23.9316239316239, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17510237, Length=233, Percent_Identity=27.4678111587983, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71983523, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71983516, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71983510, Length=236, Percent_Identity=26.6949152542373, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17565586, Length=225, Percent_Identity=23.1111111111111, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193211017, Length=261, Percent_Identity=24.5210727969349, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211015, Length=261, Percent_Identity=24.5210727969349, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996809, Length=261, Percent_Identity=24.5210727969349, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534520, Length=225, Percent_Identity=27.1111111111111, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322980, Length=238, Percent_Identity=26.0504201680672, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI221512771, Length=232, Percent_Identity=28.448275862069, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI24666092, Length=240, Percent_Identity=27.5, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582014, Length=262, Percent_Identity=24.4274809160305, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24582012, Length=262, Percent_Identity=24.4274809160305, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24650855, Length=216, Percent_Identity=26.3888888888889, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24650853, Length=216, Percent_Identity=26.3888888888889, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24643674, Length=235, Percent_Identity=23.8297872340426, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648314, Length=240, Percent_Identity=25.8333333333333, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281362751, Length=216, Percent_Identity=26.3888888888889, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85725262, Length=244, Percent_Identity=26.2295081967213, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574150, Length=232, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007328, Length=232, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573571, Length=252, Percent_Identity=22.6190476190476, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28573573, Length=244, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28571209, Length=233, Percent_Identity=23.6051502145923, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007184, Length=235, Percent_Identity=24.2553191489362, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI221500365, Length=235, Percent_Identity=24.2553191489362, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641342, Length=230, Percent_Identity=24.3478260869565, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI28574744, Length=173, Percent_Identity=24.2774566473988, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28087; Mature: 27956
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHLPLLEIKNLSKSYGAVKAVNDVSIHIDRGEIAGLIGPNGSGKSTFFDCSTGLAKPD CCCCCCHHHHHHCHHHHCCEEEECEEEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCC TGTVVLDGQDITGWSLNRIAREGRMLRSFQKTVTFRSLDVEENLVIAGQMFTFPSITSTF CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCHHHHH GLGKMSRQRVGGLRERARDLIKMAGLWDVRHQPAGNLSGGQQKLIQFASMLMPEPKLILL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE DEPMAGINPKIIERVVDTIRYANKSLGVSFLVIEHNIDVVTSICQRVIVLDQGAKLVEGL ECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCC PGDIIQDQRVREAYLGG CCCHHHHHHHHHHHCCC >Mature Secondary Structure TSHLPLLEIKNLSKSYGAVKAVNDVSIHIDRGEIAGLIGPNGSGKSTFFDCSTGLAKPD CCCCCHHHHHHCHHHHCCEEEECEEEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCC TGTVVLDGQDITGWSLNRIAREGRMLRSFQKTVTFRSLDVEENLVIAGQMFTFPSITSTF CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEECCCHHHHH GLGKMSRQRVGGLRERARDLIKMAGLWDVRHQPAGNLSGGQQKLIQFASMLMPEPKLILL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE DEPMAGINPKIIERVVDTIRYANKSLGVSFLVIEHNIDVVTSICQRVIVLDQGAKLVEGL ECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCC PGDIIQDQRVREAYLGG CCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]