| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is dhaK1 [H]
Identifier: 116249053
GI number: 116249053
Start: 418303
End: 419307
Strand: Reverse
Name: dhaK1 [H]
Synonym: pRL120387
Alternate gene names: 116249053
Gene position: 419307-418303 (Counterclockwise)
Preceding gene: 116249054
Following gene: 116249052
Centisome position: 48.2
GC content: 62.49
Gene sequence:
>1005_bases ATGAAGACGAAGAAGCTTATCAATGCCGGCGCAGATGCCGTCGATGAGATGCTGCAAGGGGTGTTGGCAGCGCATCCGCG CCACCTATACGCCGTGGAGAACATGCCCCGCGCGATCATTGCCAGAAACGGGCCGCGCAGGGGCAAGGTCGGGCTGGTCA TCGGCGGTGGATCCGGGCACGAACCGACATTTCTGGGGTTTGTCGGCAAAGGCCTCGCAGACGCGGCCGCGATCGGCAAC GTCTTCGCGTCGCCGCCGCCCGATCCGATCATCGCCTGCGCCATGGCGGTCGACGGCGGCGCCGGTGTCCTGTTCATGTA TGGCAATTATGCCGGCGACGTGATGAACTTCGACATGGCTGCCGAGATGCTTGCGCTTGACGAGATCGAGGTACGCACCG TGCTCACCACGGATGACGTGGCGTCTGCCCCTGCTGATCAGCGGGACAGGCGGCGGGGCGTAGCGGGCAACGTCTTCATC TTCAAGGCTGCCGGTGCGGCCTGCGATCTTCTCTATTCCTTTGACGATGTCGAGCGTGTCGCCCGCCATGCCAATGCGCG AACCTATACGATGGGTGTCGCGCTTTCGCCCTGTTCGCTGCCCCAGACCCTCCGACCAAACTTCCTGATCGGCGAAGGCG AGATGGAGATCGGAATGGGCATCCATGGGGAGCCTGGCGTGGCGCGCGAGCCGCTGAGGCCGGCCGACGCGGTGACCGAC GAACTCCTGGACAGCATTCTTCGCGAAATGAAAGCAGACCGGGGTGATCGTGTCGCGGTGCTCGTCAATTCACTGGGCTC GACCCCGATGATGGAACTCTACATCATGATGCGGCGCGTGAAGTCCCGGCTCGACGATGCCGGGTTCGTCATCCATACGT CGCTCGTCGGAAACTACTGCACCTCGCTCGAAATGGCCGGCGCGTCGATCACGGTCATGCATCTCGACGACGAGCTTCAG CGATTGATCGACCACCCCTGTGATTGCGCGATGTTTGCGAGGTAA
Upstream 100 bases:
>100_bases CTGCTCGCGCCGTTTGCGACCGCAGCCTTGCCGCTGGCGGATTGACGTCCCACGCGCCAGCCGCATCTATGCAATCGGAG TTCGTTCCGTGGAGGATTGC
Downstream 100 bases:
>100_bases TCGATGATGTTTACGACCGAAGACCTGCAGCGCATGTTTGCCGGGATTGCCGAGGATATTGCAGCAGAGAGCGACCATCT CTGCGCGTTGGACGGCGCCA
Product: putative dihydroxyacetone kinase
Products: ADP; glycerone phosphate
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKTKKLINAGADAVDEMLQGVLAAHPRHLYAVENMPRAIIARNGPRRGKVGLVIGGGSGHEPTFLGFVGKGLADAAAIGN VFASPPPDPIIACAMAVDGGAGVLFMYGNYAGDVMNFDMAAEMLALDEIEVRTVLTTDDVASAPADQRDRRRGVAGNVFI FKAAGAACDLLYSFDDVERVARHANARTYTMGVALSPCSLPQTLRPNFLIGEGEMEIGMGIHGEPGVAREPLRPADAVTD ELLDSILREMKADRGDRVAVLVNSLGSTPMMELYIMMRRVKSRLDDAGFVIHTSLVGNYCTSLEMAGASITVMHLDDELQ RLIDHPCDCAMFAR
Sequences:
>Translated_334_residues MKTKKLINAGADAVDEMLQGVLAAHPRHLYAVENMPRAIIARNGPRRGKVGLVIGGGSGHEPTFLGFVGKGLADAAAIGN VFASPPPDPIIACAMAVDGGAGVLFMYGNYAGDVMNFDMAAEMLALDEIEVRTVLTTDDVASAPADQRDRRRGVAGNVFI FKAAGAACDLLYSFDDVERVARHANARTYTMGVALSPCSLPQTLRPNFLIGEGEMEIGMGIHGEPGVAREPLRPADAVTD ELLDSILREMKADRGDRVAVLVNSLGSTPMMELYIMMRRVKSRLDDAGFVIHTSLVGNYCTSLEMAGASITVMHLDDELQ RLIDHPCDCAMFAR >Mature_334_residues MKTKKLINAGADAVDEMLQGVLAAHPRHLYAVENMPRAIIARNGPRRGKVGLVIGGGSGHEPTFLGFVGKGLADAAAIGN VFASPPPDPIIACAMAVDGGAGVLFMYGNYAGDVMNFDMAAEMLALDEIEVRTVLTTDDVASAPADQRDRRRGVAGNVFI FKAAGAACDLLYSFDDVERVARHANARTYTMGVALSPCSLPQTLRPNFLIGEGEMEIGMGIHGEPGVAREPLRPADAVTD ELLDSILREMKADRGDRVAVLVNSLGSTPMMELYIMMRRVKSRLDDAGFVIHTSLVGNYCTSLEMAGASITVMHLDDELQ RLIDHPCDCAMFAR
Specific function: Dihydroxyacetone binding subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone. Binds covalently dihydroxyacetone in hemiaminal linkage. Acts also as a corepressor of dhaR by binding to its sensor domain, in the
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaK domain [H]
Homologues:
Organism=Homo sapiens, GI20149621, Length=339, Percent_Identity=34.8082595870207, Blast_Score=183, Evalue=2e-46, Organism=Escherichia coli, GI87081857, Length=347, Percent_Identity=40.9221902017291, Blast_Score=264, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17565018, Length=325, Percent_Identity=36, Blast_Score=186, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321055, Length=310, Percent_Identity=32.258064516129, Blast_Score=143, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6323570, Length=325, Percent_Identity=32, Blast_Score=136, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004006 - InterPro: IPR012736 [H]
Pfam domain/function: PF02733 Dak1 [H]
EC number: 2.7.1.29
Molecular weight: Translated: 35749; Mature: 35749
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKKLINAGADAVDEMLQGVLAAHPRHLYAVENMPRAIIARNGPRRGKVGLVIGGGSGH CCCHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCEEEEEECCCCC EPTFLGFVGKGLADAAAIGNVFASPPPDPIIACAMAVDGGAGVLFMYGNYAGDVMNFDMA CCEEEHHHHCCHHHHHHHHHHCCCCCCCHHEEEEEEECCCCEEEEEECCCCCCHHHHHHH AEMLALDEIEVRTVLTTDDVASAPADQRDRRRGVAGNVFIFKAAGAACDLLYSFDDVERV HHHHHHCCEEEEEEEECCHHHCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH ARHANARTYTMGVALSPCSLPQTLRPNFLIGEGEMEIGMGIHGEPGVAREPLRPADAVTD HHHCCCCEEEEEEEECCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCHHHHHH ELLDSILREMKADRGDRVAVLVNSLGSTPMMELYIMMRRVKSRLDDAGFVIHTSLVGNYC HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH TSLEMAGASITVMHLDDELQRLIDHPCDCAMFAR HHHEECCCEEEEEECCHHHHHHHCCCCCEECCCC >Mature Secondary Structure MKTKKLINAGADAVDEMLQGVLAAHPRHLYAVENMPRAIIARNGPRRGKVGLVIGGGSGH CCCHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCCEEEEEECCCCC EPTFLGFVGKGLADAAAIGNVFASPPPDPIIACAMAVDGGAGVLFMYGNYAGDVMNFDMA CCEEEHHHHCCHHHHHHHHHHCCCCCCCHHEEEEEEECCCCEEEEEECCCCCCHHHHHHH AEMLALDEIEVRTVLTTDDVASAPADQRDRRRGVAGNVFIFKAAGAACDLLYSFDDVERV HHHHHHCCEEEEEEEECCHHHCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH ARHANARTYTMGVALSPCSLPQTLRPNFLIGEGEMEIGMGIHGEPGVAREPLRPADAVTD HHHCCCCEEEEEEEECCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCHHHHHH ELLDSILREMKADRGDRVAVLVNSLGSTPMMELYIMMRRVKSRLDDAGFVIHTSLVGNYC HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH TSLEMAGASITVMHLDDELQRLIDHPCDCAMFAR HHHEECCCEEEEEECCHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]