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The map label for this gene is yurN [H]

Identifier: 116249050

GI number: 116249050

Start: 415337

End: 416236

Strand: Reverse

Name: yurN [H]

Synonym: pRL120384

Alternate gene names: 116249050

Gene position: 416236-415337 (Counterclockwise)

Preceding gene: 116249051

Following gene: 116249049

Centisome position: 47.84

GC content: 57.56

Gene sequence:

>900_bases
ATGTCACTTCGACAATCGACACATGATCCGCGCGTACAAGCGCTCATCCTGCTCGTGCCAGCACTCGCGATTTACGCGGT
CTTCGCGCTCTACCCGATGCTCAACGTCGTGATCCTGAGCTTTCAGAAATGGAACGGGCTCGATCCCAATCGACAATTCG
TGGGGATTGCGAACTACCAGGCAATTTTCACAAGAGATCCTGTGTTCTGGGTTGCCTTTCGCAACACGGTGATCTGGACC
TTGATGAGCCTGATCTTCCCGCCAATGGTCGGACTGCTGCTGGCGCTCAGCCTCAACCAGAAGATATTCGGCCGAAATGG
CCTCAGGGCCATCTTCTATCTGCCGGTTATCATCGCGCCGATTGCCGTCGCCACCATGTGGAAATGGATGTACGATCCGT
TCTTCGGCCTTTTCAGCCAATTGCTCACCTCGTGGGGCATGCAAGGTTGGATCAATGACTGGCTGGGCAACCGGGATATC
GCCCTTTATTCGGTCTTCGTCGCCTATCTGTGGCAGACAGTTGGCTTCTCGATGGTCCTGTTCCTGGCGGGCCTGCAGAA
CGTCTCCCAGACACTCGTCGAGGCCGCGCGCATCGATGGCGCCGGCCGCTGGGCGGTGTTCAAGCATGTGACATTGCCGG
CATTGCGCCCGACGATCACGATCGTTCTCGTTCTTTCCGTCATCTCCTCCCTGAAGGCTTTCGACATCGTCTATGGTCTG
ACGGGCGGCGGGCCGGCGCAGTCCACCCAGATGCTGGCGCTCTGGGCGTTCACGCAGGCGATGCAGATCTTCGATTTCGG
ACGAGGTGCGGCGATTTCGGTCGTGCTGCTGCTGATCACCATGGCCGTCGTCATTCCCTATCTCAAATGGACCCAGAAGC
ACGAGGAGGTTGAATCGTGA

Upstream 100 bases:

>100_bases
AACCTGATTCCTCCCGAGGTGCCAGTCGATCGACCCAACTGTCGATCGACCGGCACATTCTTTCATCAGCTGGCAGCCGC
TTCACTGCCAGGAGGAAAGC

Downstream 100 bases:

>100_bases
CAGCAGTACCGACCGACCAGACCGCAGTGCATCTGCAGGTCGAACCATCGTCGATGAAGCGGGATCCGATTCTGATCGGC
CTCTGGATCACGCTTGTCAT

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSLRQSTHDPRVQALILLVPALAIYAVFALYPMLNVVILSFQKWNGLDPNRQFVGIANYQAIFTRDPVFWVAFRNTVIWT
LMSLIFPPMVGLLLALSLNQKIFGRNGLRAIFYLPVIIAPIAVATMWKWMYDPFFGLFSQLLTSWGMQGWINDWLGNRDI
ALYSVFVAYLWQTVGFSMVLFLAGLQNVSQTLVEAARIDGAGRWAVFKHVTLPALRPTITIVLVLSVISSLKAFDIVYGL
TGGGPAQSTQMLALWAFTQAMQIFDFGRGAAISVVLLLITMAVVIPYLKWTQKHEEVES

Sequences:

>Translated_299_residues
MSLRQSTHDPRVQALILLVPALAIYAVFALYPMLNVVILSFQKWNGLDPNRQFVGIANYQAIFTRDPVFWVAFRNTVIWT
LMSLIFPPMVGLLLALSLNQKIFGRNGLRAIFYLPVIIAPIAVATMWKWMYDPFFGLFSQLLTSWGMQGWINDWLGNRDI
ALYSVFVAYLWQTVGFSMVLFLAGLQNVSQTLVEAARIDGAGRWAVFKHVTLPALRPTITIVLVLSVISSLKAFDIVYGL
TGGGPAQSTQMLALWAFTQAMQIFDFGRGAAISVVLLLITMAVVIPYLKWTQKHEEVES
>Mature_298_residues
SLRQSTHDPRVQALILLVPALAIYAVFALYPMLNVVILSFQKWNGLDPNRQFVGIANYQAIFTRDPVFWVAFRNTVIWTL
MSLIFPPMVGLLLALSLNQKIFGRNGLRAIFYLPVIIAPIAVATMWKWMYDPFFGLFSQLLTSWGMQGWINDWLGNRDIA
LYSVFVAYLWQTVGFSMVLFLAGLQNVSQTLVEAARIDGAGRWAVFKHVTLPALRPTITIVLVLSVISSLKAFDIVYGLT
GGGPAQSTQMLALWAFTQAMQIFDFGRGAAISVVLLLITMAVVIPYLKWTQKHEEVES

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=31.1538461538462, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789861, Length=297, Percent_Identity=25.5892255892256, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=25.1968503937008, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33554; Mature: 33423

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRQSTHDPRVQALILLVPALAIYAVFALYPMLNVVILSFQKWNGLDPNRQFVGIANYQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCE
AIFTRDPVFWVAFRNTVIWTLMSLIFPPMVGLLLALSLNQKIFGRNGLRAIFYLPVIIAP
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHH
IAVATMWKWMYDPFFGLFSQLLTSWGMQGWINDWLGNRDIALYSVFVAYLWQTVGFSMVL
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FLAGLQNVSQTLVEAARIDGAGRWAVFKHVTLPALRPTITIVLVLSVISSLKAFDIVYGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGGGPAQSTQMLALWAFTQAMQIFDFGRGAAISVVLLLITMAVVIPYLKWTQKHEEVES
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLRQSTHDPRVQALILLVPALAIYAVFALYPMLNVVILSFQKWNGLDPNRQFVGIANYQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCE
AIFTRDPVFWVAFRNTVIWTLMSLIFPPMVGLLLALSLNQKIFGRNGLRAIFYLPVIIAP
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHH
IAVATMWKWMYDPFFGLFSQLLTSWGMQGWINDWLGNRDIALYSVFVAYLWQTVGFSMVL
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FLAGLQNVSQTLVEAARIDGAGRWAVFKHVTLPALRPTITIVLVLSVISSLKAFDIVYGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TGGGPAQSTQMLALWAFTQAMQIFDFGRGAAISVVLLLITMAVVIPYLKWTQKHEEVES
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]