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The map label for this gene is tdcF [C]

Identifier: 116248980

GI number: 116248980

Start: 329438

End: 329836

Strand: Reverse

Name: tdcF [C]

Synonym: pRL120311

Alternate gene names: 116248980

Gene position: 329836-329438 (Counterclockwise)

Preceding gene: 116248981

Following gene: 116248973

Centisome position: 37.91

GC content: 60.15

Gene sequence:

>399_bases
GTGCGATCGATGAAGAAGACCTTCAATCCGGCCTCGGTGCGCCGGCCTTTTGGAAATTACAATCACGGCCTGCTCGTGCC
GCCCGGCGCATCGCTCCTGGTCACGTCGGGCCAGCTTGGTATCGGTCTCGACGATGTTGTTCCGAGCGACATCACCGCGC
AGGCAGAGCTCTGCTTCGAGGCGATCAAGGCGATCCTCGAAGAGGCGGAGATGAGTTTTGCCGATGTCATCCGCATTTCG
GGCTTCGTCACCCGCCGCGAGGATTTCCCGGCCTATATGGCCGTGCGGGATCGCTATACGCTCGATCCAAAGCCGGTTTC
CACCTTGCTCGTCATCGGCGGCTTTACCCGCCCTGAGTTCCTCGTCGAAGTCGAGGTGACGGCCGCGAAAATCTTCTAA

Upstream 100 bases:

>100_bases
CCCGCATCACTCGTCGCAAGGCATCATGAGCGGCAGCGATATTCTCATATCCTGCCGCATCGTGTACGGTCGCGGGATCT
GCGGACCTATGGGAAACTAA

Downstream 100 bases:

>100_bases
AAGCGCTCCATCGCCCCTCCGACGCGGGCGAGGAATTTTGCCCGCGTTTCCGGCGTGCAATTGTTCATGTCGTAATGGGC
CAGGAACGTCACCGGCCTCA

Product: putative threonine degradation protein

Products: NA

Alternate protein names: Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease L-PSP Family Protein; Threonine Degradation Protein; L-PSP Family Endoribonuclease; MRNA Endoribonuclease

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRSMKKTFNPASVRRPFGNYNHGLLVPPGASLLVTSGQLGIGLDDVVPSDITAQAELCFEAIKAILEEAEMSFADVIRIS
GFVTRREDFPAYMAVRDRYTLDPKPVSTLLVIGGFTRPEFLVEVEVTAAKIF

Sequences:

>Translated_132_residues
MRSMKKTFNPASVRRPFGNYNHGLLVPPGASLLVTSGQLGIGLDDVVPSDITAQAELCFEAIKAILEEAEMSFADVIRIS
GFVTRREDFPAYMAVRDRYTLDPKPVSTLLVIGGFTRPEFLVEVEVTAAKIF
>Mature_132_residues
MRSMKKTFNPASVRRPFGNYNHGLLVPPGASLLVTSGQLGIGLDDVVPSDITAQAELCFEAIKAILEEAEMSFADVIRIS
GFVTRREDFPAYMAVRDRYTLDPKPVSTLLVIGGFTRPEFLVEVEVTAAKIF

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14508; Mature: 14508

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMKKTFNPASVRRPFGNYNHGLLVPPGASLLVTSGQLGIGLDDVVPSDITAQAELCFE
CCCCHHCCCCHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHH
AIKAILEEAEMSFADVIRISGFVTRREDFPAYMAVRDRYTLDPKPVSTLLVIGGFTRPEF
HHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE
LVEVEVTAAKIF
EEEEEEEEEECC
>Mature Secondary Structure
MRSMKKTFNPASVRRPFGNYNHGLLVPPGASLLVTSGQLGIGLDDVVPSDITAQAELCFE
CCCCHHCCCCHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHH
AIKAILEEAEMSFADVIRISGFVTRREDFPAYMAVRDRYTLDPKPVSTLLVIGGFTRPEF
HHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE
LVEVEVTAAKIF
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA