| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is tauC [C]
Identifier: 116248976
GI number: 116248976
Start: 325294
End: 326139
Strand: Direct
Name: tauC [C]
Synonym: pRL120307
Alternate gene names: 116248976
Gene position: 325294-326139 (Clockwise)
Preceding gene: 116248975
Following gene: 116248977
Centisome position: 37.39
GC content: 61.47
Gene sequence:
>846_bases TTGATGAGTGACGAAACAGACACATCGCCGCTGCTCGTTAAGGGTACCGCAAGCGCAACGCGCCGCGATCTTGCGCTGCG CATCGCCATCCCCTTCCTCGTCATCGCCCTGTTGATCCTTGTCTGGTACGCCTATGTGAAACTGTCCGGCGTGCCACCCT ATATCCTGCCAGGACCGGCCGCTGTGGCAAACGCCTTCGTGACGGATTGGGGTACGCTGGCCCCTGCCCTCTGGGTCACC ACCAAGATCACCTTCATGTCGCTGATGCTGGCGCTTGTCGGCGGCGTCGGCTTTGCGATCTTTCTCGTGCAGTCGCGCTG GGTCGAGCTTGCCTTCTATCCGCTTGCCGTCATCCTGCAGGTAACGCCGATCGTCGCCATCTCGCCGCTGATCCTGATCT ATGCGCCGTCGACACAGGTCGCGCTGCTGATCTGCGCCTTCCTCGTCGCCTTTTTCCCGATCCTTTCGAACATGGTGCAG GGACTGAAGAGCGTCGACCACAATCTGATCAACCTCTTTGAACTCTACGGCGCCTCGCGATGGCAGACGTTGATCCATCT GAAGATCCCGGCCGCCCAGCCCTATTTCATGACCGGCCTTCGCATCGGCGGCGGGCTCGCACTGATCGCCGCTGTCGTCG CCGAATTTGCCGCGGGCTCGGCCGGTGCCGGATCCGGTCTCGCCTTCCGCCTGCTCGAAGCGCAGTACCGGATGAACATC CCGCGGCTCTTCGCAGCCCTCTTGATGCTCTCCATGCTTGGCGTAGCGATCTTCGGCCTCACCACACTCATCGCCTGGCT GAGCCTCCACCGCTGGCATGAGAGCAGCATCAAACGGGAAAACTGA
Upstream 100 bases:
>100_bases TCGAACGCGACGCGCACTACCGCACCTCGGAAGAATACCGCAAGGCCTGCGAAACGGTATCGCATTCGCTGATCGGGGCG ATCAATTCGGCAGGGGATCA
Downstream 100 bases:
>100_bases TGACCTATTCCTTCATATCCCCGCCGAATGCTGCCCGGTTCGTGCTGAGCAATGCGACAGTGCCCGCCGTCACCGTCGAG CATATCGACGTGCCGGTCAC
Product: putative ATP-binding component of ABC transporter
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MMSDETDTSPLLVKGTASATRRDLALRIAIPFLVIALLILVWYAYVKLSGVPPYILPGPAAVANAFVTDWGTLAPALWVT TKITFMSLMLALVGGVGFAIFLVQSRWVELAFYPLAVILQVTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQ GLKSVDHNLINLFELYGASRWQTLIHLKIPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRMNI PRLFAALLMLSMLGVAIFGLTTLIAWLSLHRWHESSIKREN
Sequences:
>Translated_281_residues MMSDETDTSPLLVKGTASATRRDLALRIAIPFLVIALLILVWYAYVKLSGVPPYILPGPAAVANAFVTDWGTLAPALWVT TKITFMSLMLALVGGVGFAIFLVQSRWVELAFYPLAVILQVTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQ GLKSVDHNLINLFELYGASRWQTLIHLKIPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRMNI PRLFAALLMLSMLGVAIFGLTTLIAWLSLHRWHESSIKREN >Mature_281_residues MMSDETDTSPLLVKGTASATRRDLALRIAIPFLVIALLILVWYAYVKLSGVPPYILPGPAAVANAFVTDWGTLAPALWVT TKITFMSLMLALVGGVGFAIFLVQSRWVELAFYPLAVILQVTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQ GLKSVDHNLINLFELYGASRWQTLIHLKIPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRMNI PRLFAALLMLSMLGVAIFGLTTLIAWLSLHRWHESSIKREN
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=211, Percent_Identity=28.9099526066351, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081802, Length=231, Percent_Identity=25.974025974026, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30443; Mature: 30443
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDETDTSPLLVKGTASATRRDLALRIAIPFLVIALLILVWYAYVKLSGVPPYILPGPA CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AVANAFVTDWGTLAPALWVTTKITFMSLMLALVGGVGFAIFLVQSRWVELAFYPLAVILQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASR HHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WQTLIHLKIPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRMNI HEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCH PRLFAALLMLSMLGVAIFGLTTLIAWLSLHRWHESSIKREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMSDETDTSPLLVKGTASATRRDLALRIAIPFLVIALLILVWYAYVKLSGVPPYILPGPA CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AVANAFVTDWGTLAPALWVTTKITFMSLMLALVGGVGFAIFLVQSRWVELAFYPLAVILQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASR HHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WQTLIHLKIPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRMNI HEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCH PRLFAALLMLSMLGVAIFGLTTLIAWLSLHRWHESSIKREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]