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The map label for this gene is yagQ [H]

Identifier: 116248968

GI number: 116248968

Start: 316364

End: 317293

Strand: Reverse

Name: yagQ [H]

Synonym: pRL120299

Alternate gene names: 116248968

Gene position: 317293-316364 (Counterclockwise)

Preceding gene: 116248969

Following gene: 116248967

Centisome position: 36.47

GC content: 64.62

Gene sequence:

>930_bases
ATGGATCAGACACTTGCGCCCATCACGGCGCCAATTCCCGTCAGGGCCGCGTCCACCGACGATCCGGCGGAACTGCTTCG
CTTCGCGATAGACGCCCATGGTCTCGGCGCGGCGGCACTTGCCACCCTCGTCGAAATCCGGGGCGGAGCGGCGCGGGCGC
TCGGCGCTCATATGGCCGTTGCAGCAGACGGGCGGTTCTGCGGCTATGTCTCCGGCGGATGCGTCGAAGCCGCCGTCGCT
TCCGAAGCACTTCTGGCAATGGCGGAAGGACGGGACCGCACGGTCAAGTTCGGCGACGGCTCTCCCTTCTTCGACATTGT
CCTTCCCTGCGGCGGCGGGATCGCTGTTGCAATCCATGTCCTCAAAGATGTCGGAGCTTTGCAGCATGTTCTTGATCGTC
TCGAACGCAGGCAGGCAGCCGGCCTTGCATATTCGCCGGAGCGGCAGACGCTCGAAGCGGTAGACCCACTGCCACGGGCG
TGCTGGCACGAGCGAGATTTTCTGACCGTCTACCGTCCCCGTACCCGCATTGTCCTTTCCGGGCGGACCATCGAAGCGCA
GGCCGTCGCACGACTGGCCGAGGCTTCCGCCTACGACGTGATCGTCAGGGGGCAGGACGAGGGGGCCAAGGTCGCAGCCG
ACATCATCGACCCCTTCACGGCCGTCGTGCTCCTGCATCATGACCTCGACGCCGAAGCCGCCATTCTCGAGACCGCGCTT
CACTCACCCGCCTTTTATATCGGCGCGCTCGGCAGCACCCGGACGCATCATCGGCGTGTCGAGCGGTTGACAGCCATGGC
TTTCGGAAAGGATGATATCGGTCGCATCAAGGCGCCCATCGGGATGTTCGGCCCGACGCGAGATGCAACCTCGCTCGCCC
TGTCTGTTCTGGCGGATGTCGCCGCGGCAAGACTGGTGGCTTATGCGTGA

Upstream 100 bases:

>100_bases
CTGACACTTGACAAGCTCATCGGTGGCTTGCCGGATGTGGCCTGATTATTTCGGCGGTGGTCTCGAAAGCGGACCCCCGT
CACTTCCTGTAGGATTTCCG

Downstream 100 bases:

>100_bases
GGCGTCAGTCGCGATCGTCATTCTCGCTGCCGGCAAGGCAAGCCGGATGGGTGAGGGTGGGAGGCACAAGCTGCTGGCCG
AATTCGACGGCGTGCCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MDQTLAPITAPIPVRAASTDDPAELLRFAIDAHGLGAAALATLVEIRGGAARALGAHMAVAADGRFCGYVSGGCVEAAVA
SEALLAMAEGRDRTVKFGDGSPFFDIVLPCGGGIAVAIHVLKDVGALQHVLDRLERRQAAGLAYSPERQTLEAVDPLPRA
CWHERDFLTVYRPRTRIVLSGRTIEAQAVARLAEASAYDVIVRGQDEGAKVAADIIDPFTAVVLLHHDLDAEAAILETAL
HSPAFYIGALGSTRTHHRRVERLTAMAFGKDDIGRIKAPIGMFGPTRDATSLALSVLADVAAARLVAYA

Sequences:

>Translated_309_residues
MDQTLAPITAPIPVRAASTDDPAELLRFAIDAHGLGAAALATLVEIRGGAARALGAHMAVAADGRFCGYVSGGCVEAAVA
SEALLAMAEGRDRTVKFGDGSPFFDIVLPCGGGIAVAIHVLKDVGALQHVLDRLERRQAAGLAYSPERQTLEAVDPLPRA
CWHERDFLTVYRPRTRIVLSGRTIEAQAVARLAEASAYDVIVRGQDEGAKVAADIIDPFTAVVLLHHDLDAEAAILETAL
HSPAFYIGALGSTRTHHRRVERLTAMAFGKDDIGRIKAPIGMFGPTRDATSLALSVLADVAAARLVAYA
>Mature_309_residues
MDQTLAPITAPIPVRAASTDDPAELLRFAIDAHGLGAAALATLVEIRGGAARALGAHMAVAADGRFCGYVSGGCVEAAVA
SEALLAMAEGRDRTVKFGDGSPFFDIVLPCGGGIAVAIHVLKDVGALQHVLDRLERRQAAGLAYSPERQTLEAVDPLPRA
CWHERDFLTVYRPRTRIVLSGRTIEAQAVARLAEASAYDVIVRGQDEGAKVAADIIDPFTAVVLLHHDLDAEAAILETAL
HSPAFYIGALGSTRTHHRRVERLTAMAFGKDDIGRIKAPIGMFGPTRDATSLALSVLADVAAARLVAYA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=294, Percent_Identity=49.6598639455782, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 32557; Mature: 32557

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQTLAPITAPIPVRAASTDDPAELLRFAIDAHGLGAAALATLVEIRGGAARALGAHMAV
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHEEE
AADGRFCGYVSGGCVEAAVASEALLAMAEGRDRTVKFGDGSPFFDIVLPCGGGIAVAIHV
EECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCHHHHHHH
LKDVGALQHVLDRLERRQAAGLAYSPERQTLEAVDPLPRACWHERDFLTVYRPRTRIVLS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCEEEECCCEEEEEE
GRTIEAQAVARLAEASAYDVIVRGQDEGAKVAADIIDPFTAVVLLHHDLDAEAAILETAL
CCEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
HSPAFYIGALGSTRTHHRRVERLTAMAFGKDDIGRIKAPIGMFGPTRDATSLALSVLADV
CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AAARLVAYA
HHHHHHHCC
>Mature Secondary Structure
MDQTLAPITAPIPVRAASTDDPAELLRFAIDAHGLGAAALATLVEIRGGAARALGAHMAV
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHEEE
AADGRFCGYVSGGCVEAAVASEALLAMAEGRDRTVKFGDGSPFFDIVLPCGGGIAVAIHV
EECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCHHHHHHH
LKDVGALQHVLDRLERRQAAGLAYSPERQTLEAVDPLPRACWHERDFLTVYRPRTRIVLS
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCEEEECCCEEEEEE
GRTIEAQAVARLAEASAYDVIVRGQDEGAKVAADIIDPFTAVVLLHHDLDAEAAILETAL
CCEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
HSPAFYIGALGSTRTHHRRVERLTAMAFGKDDIGRIKAPIGMFGPTRDATSLALSVLADV
CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AAARLVAYA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]