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The map label for this gene is uidR [C]

Identifier: 116248965

GI number: 116248965

Start: 313519

End: 314118

Strand: Direct

Name: uidR [C]

Synonym: pRL120296

Alternate gene names: 116248965

Gene position: 313519-314118 (Clockwise)

Preceding gene: 116248963

Following gene: 116248966

Centisome position: 36.04

GC content: 62.67

Gene sequence:

>600_bases
ATGCGCAAACCGCGCCAGGAGATGATCGCAGAGACCCGCGGCAAGCTTATCGCAGCCGGGCGGCGCGCCTTTGGCACGAT
CGGCTACGCGGAAGCGTCGATGGACGATTTCACCGGCGAAGCGGGACTGACGCGAGGGGCCCTCTATCACCACTTCGGTG
ACAAGAGAGGCCTGCTCCAGGCCGTCATCATCGAAATCGACGCGGAAATGACGGAACGGCTGAACGAGGTCTCGGCCGCC
GCTCCGACGCGCTGGCAGGGCTTTGTCGACGAGTGCTCCGCTTATATCGAAATGGCGCTTGAGCCCGAAATCCAGCGTAT
CATGTTTCGCGATGGCCCGGCTGTACTCGGCGACATCTCGCAATGGCAGAACACCCCCGGCTGTATCGCCGCCCTCTCCC
GCAGCCTCGACCGTCTCAAGGCCGATGGCGAGATTATCGACATCGACACCGAAACCGCCGCTCGCCTTATCAATGGCGCC
AGCAGCCATATGGCGCTTTGGATCGCCAATGCCGAGAATCCGGAGGCGGTTTCGAAGCGGGCGGTTGCGGGGTTCAAGGC
TATGCTGGGCAGCCTCCGCAGGCAGCAACGAGGTGTTTGA

Upstream 100 bases:

>100_bases
TCGGATAGAACACTCATATACGGAGCGTATGTGTTTAGATAATGCATACGTCACGTATGTCAATGAAAAAAGATACGCGG
CGTATGCCAATGGAGAAGCC

Downstream 100 bases:

>100_bases
TTTTCTATTCAGGCGCCGTGGGGGTCGGTCCTCGACGATCGCGTTCCCGCCCCTCTCTAGCCGCCACTCCACACTCTGAT
ACGTTTTTGGCATTTCCTGA

Product: TetR family transcriptional regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transposon; TetR-Type Transcriptional Regulator; TRANSCRIPTIONal REGULATOR TetR Family

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRKPRQEMIAETRGKLIAAGRRAFGTIGYAEASMDDFTGEAGLTRGALYHHFGDKRGLLQAVIIEIDAEMTERLNEVSAA
APTRWQGFVDECSAYIEMALEPEIQRIMFRDGPAVLGDISQWQNTPGCIAALSRSLDRLKADGEIIDIDTETAARLINGA
SSHMALWIANAENPEAVSKRAVAGFKAMLGSLRRQQRGV

Sequences:

>Translated_199_residues
MRKPRQEMIAETRGKLIAAGRRAFGTIGYAEASMDDFTGEAGLTRGALYHHFGDKRGLLQAVIIEIDAEMTERLNEVSAA
APTRWQGFVDECSAYIEMALEPEIQRIMFRDGPAVLGDISQWQNTPGCIAALSRSLDRLKADGEIIDIDTETAARLINGA
SSHMALWIANAENPEAVSKRAVAGFKAMLGSLRRQQRGV
>Mature_199_residues
MRKPRQEMIAETRGKLIAAGRRAFGTIGYAEASMDDFTGEAGLTRGALYHHFGDKRGLLQAVIIEIDAEMTERLNEVSAA
APTRWQGFVDECSAYIEMALEPEIQRIMFRDGPAVLGDISQWQNTPGCIAALSRSLDRLKADGEIIDIDTETAARLINGA
SSHMALWIANAENPEAVSKRAVAGFKAMLGSLRRQQRGV

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21778; Mature: 21778

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPRQEMIAETRGKLIAAGRRAFGTIGYAEASMDDFTGEAGLTRGALYHHFGDKRGLLQ
CCCCHHHHHHHHHCCCHHHCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCHHHHH
AVIIEIDAEMTERLNEVSAAAPTRWQGFVDECSAYIEMALEPEIQRIMFRDGPAVLGDIS
HHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCHH
QWQNTPGCIAALSRSLDRLKADGEIIDIDTETAARLINGASSHMALWIANAENPEAVSKR
HHCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH
AVAGFKAMLGSLRRQQRGV
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKPRQEMIAETRGKLIAAGRRAFGTIGYAEASMDDFTGEAGLTRGALYHHFGDKRGLLQ
CCCCHHHHHHHHHCCCHHHCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCHHHHH
AVIIEIDAEMTERLNEVSAAAPTRWQGFVDECSAYIEMALEPEIQRIMFRDGPAVLGDIS
HHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCHH
QWQNTPGCIAALSRSLDRLKADGEIIDIDTETAARLINGASSHMALWIANAENPEAVSKR
HHCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH
AVAGFKAMLGSLRRQQRGV
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA