Click here to switch to the map view.

The map label for this gene is 116248949

Identifier: 116248949

GI number: 116248949

Start: 297044

End: 297523

Strand: Reverse

Name: 116248949

Synonym: pRL120280

Alternate gene names: NA

Gene position: 297523-297044 (Counterclockwise)

Preceding gene: 116248951

Following gene: 116248948

Centisome position: 34.2

GC content: 58.96

Gene sequence:

>480_bases
ATGATTGCCAACTATAACGACGCCGGCCTCGACTTGTCCTACGATCCCGAATCTTACGCATTGATGGCGGAAAGCTTCGA
ACAAAGCGTGGGACGCAGCCTGACGCCGGAAGGCCAGGGTGCTGAATGGCTTTACGACCAGTCGCCGGCAGTTGTCCTTG
CCCATAATACCGACGCCGATCCGCGCTTCATCTACGCAAACCGCGCTGCCCAGGCCTGCTTTGAATATTCATGGGACGAG
TTCATCACTTTGCCATCGCGTCTTTCGGCGGAGGCGCCCGATCGCGCCGAACGCGAGAGGTTGTTGAATGCCGTGGCGGC
CAACGGCTTTATCGCCGACTACCGCGGACTTCGCATCGCCAAGTCAGGGCGGCGTTTCTATATCGAAAACGCCATCGTTT
GGGATCTTGTCGACCGCAGCGGATGCCGTCGCGGTCAGGCTGCGACGTTCGATTCCTGGCAAGACGTGCAGGCGGATTGA

Upstream 100 bases:

>100_bases
TGACCGCGTCGCATTTGGAGCTTGCACTTTCTGTAGCGCAAAGGATTTTGTAGCGAGACCATCACGTCAACACCTCTCGC
CGCAATCCAGGATGCGCAGC

Downstream 100 bases:

>100_bases
GCGCCGGCTGCGGAGACCCCAACCAGGCGCCGGATATGTCCGCAGCTTTGCAAACCATGTCGTTTGCCATTTGGTTGCCA
AAAAACCATGATTGCGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: MEKHLA Domain-Containing Protein; MEKHLA Domain Superfamily Protein; Mekhla Domain Protein; PAS Sensor Protein; Mekhla Domain; MEKHLA Domain Superfamily; Mekhla Domain Superfamily

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIANYNDAGLDLSYDPESYALMAESFEQSVGRSLTPEGQGAEWLYDQSPAVVLAHNTDADPRFIYANRAAQACFEYSWDE
FITLPSRLSAEAPDRAERERLLNAVAANGFIADYRGLRIAKSGRRFYIENAIVWDLVDRSGCRRGQAATFDSWQDVQAD

Sequences:

>Translated_159_residues
MIANYNDAGLDLSYDPESYALMAESFEQSVGRSLTPEGQGAEWLYDQSPAVVLAHNTDADPRFIYANRAAQACFEYSWDE
FITLPSRLSAEAPDRAERERLLNAVAANGFIADYRGLRIAKSGRRFYIENAIVWDLVDRSGCRRGQAATFDSWQDVQAD
>Mature_159_residues
MIANYNDAGLDLSYDPESYALMAESFEQSVGRSLTPEGQGAEWLYDQSPAVVLAHNTDADPRFIYANRAAQACFEYSWDE
FITLPSRLSAEAPDRAERERLLNAVAANGFIADYRGLRIAKSGRRFYIENAIVWDLVDRSGCRRGQAATFDSWQDVQAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17842; Mature: 17842

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANYNDAGLDLSYDPESYALMAESFEQSVGRSLTPEGQGAEWLYDQSPAVVLAHNTDAD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCC
PRFIYANRAAQACFEYSWDEFITLPSRLSAEAPDRAERERLLNAVAANGFIADYRGLRIA
CEEEEECHHHHHHHHCCCHHEEECCHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEE
KSGRRFYIENAIVWDLVDRSGCRRGQAATFDSWQDVQAD
CCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIANYNDAGLDLSYDPESYALMAESFEQSVGRSLTPEGQGAEWLYDQSPAVVLAHNTDAD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCC
PRFIYANRAAQACFEYSWDEFITLPSRLSAEAPDRAERERLLNAVAANGFIADYRGLRIA
CEEEEECHHHHHHHHCCCHHEEECCHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCEEEE
KSGRRFYIENAIVWDLVDRSGCRRGQAATFDSWQDVQAD
CCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA