| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is yeiI [H]
Identifier: 116248845
GI number: 116248845
Start: 174836
End: 175999
Strand: Direct
Name: yeiI [H]
Synonym: pRL120174
Alternate gene names: 116248845
Gene position: 174836-175999 (Clockwise)
Preceding gene: 116248839
Following gene: 116248846
Centisome position: 20.1
GC content: 61.86
Gene sequence:
>1164_bases TTGTTGTCCATATCAAAAATAACGAAACTTCAACCCAGTGAACTAGACAAGATGGATGACCTTGCCCCCCAGGAAGCGGC CGTCCTGGCAATCATTAAGGACAACCCTTTCGCAGGGCAGCAGGAAATCGCGTCGATGCTCGGCCTGGCCCGCTCGACCG TGGCTGCCCACATCGTCCAGCTGATGCAGAAGGGCTATATTCTCGGCCGCGGTTATGTGATGCCGGCCAGGACGCGGGCC GTTTGCATCGGTGGCGCCGTGCTCGACCACAAGTACCGCGCCAAGGAAGCACTTGTGTTCGAAACCTCCAACCCGGTGGA TGGCATTCGCAGTCTCGGCGGCGTTGCCCGCAACGTTGCGGAAAACCTTGCACTGCTGGGTACCTCGACGAGCTTCGTCT CGATCGTCGGCGATGACGAAGGCGGAAGGGCGATCCTGAAGCATATGCGCGACCGCGGCATCGATGTGAGCCAGGTCGTC ACCACCTCGGAACGCCCGACAGCCGAATATGCTGCGATCCTCGATCCACAGGGCGAACTTGTTCTCGGCATTGCCGACAT GGGCATTTTCGACCTGCTTCTGCCGAACCATATCGAGCGGATCTGGCCGCATCTGGCCGCCGCCAGCTGGGTGTTTTCCG ACTGTAACCCGCCCGCCGAAATGCTGGCAGCCCTGATCGCCAAGCGCCAGGGCGGCGCCCGCTTCAAGCTAGCGATCGAC GCGGTCTCGACCCCCAAGGCTGCTCGCCTGCCGAAAAATCTGACCGGCATTGACCTCCTGTTCATGAATATCGACGAGGC GAATTCGATCCTGAAGCGCCAGGGCCACGAAACGATCGAGGATGCCCGCGAAGCCGCGCTTGCGCTGCAGGCAGCCGGCG CACGGGAAGCGATCGTCACCATGGCTGCACGCGGCATCGCAGTTGCCGGGATCGAAGGCGCCAAGACGTTTCCGGCGGTC ACTGCCCGGCCGATCGACATTACCGGCGCGGGCGATGCCATGATTGCTGGTACGCTTCACAGCATTCTGAACGGCGAAAA CACCTATGCCGCGGCCCGCACCGGCGCGCTGCTCGCCACGCTGACGACGGAAAGCACCGCCAGCGTCCACACCGAATTGT CCGAACGCTTCCTCGAAGCGAACATGCACCGGCTTGTCGGCTAA
Upstream 100 bases:
>100_bases CCGGCCCCGACACCGTTGGACGACGCGGTATTGGCGTTCGATACGGACATAAGCCTACCTCCAAACTCGACTGACAAACA GATGTTGACAAAAACATCTG
Downstream 100 bases:
>100_bases CCTCGCCGGCTGAATCAAGGAATTGTCACAATGACCCTCATGAAGCCCCGACTGAGCCGCGAAATGGCCGAAGCCATTGC AGCCGGCAGCCCGGTCGTAG
Product: PfkB family kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MLSISKITKLQPSELDKMDDLAPQEAAVLAIIKDNPFAGQQEIASMLGLARSTVAAHIVQLMQKGYILGRGYVMPARTRA VCIGGAVLDHKYRAKEALVFETSNPVDGIRSLGGVARNVAENLALLGTSTSFVSIVGDDEGGRAILKHMRDRGIDVSQVV TTSERPTAEYAAILDPQGELVLGIADMGIFDLLLPNHIERIWPHLAAASWVFSDCNPPAEMLAALIAKRQGGARFKLAID AVSTPKAARLPKNLTGIDLLFMNIDEANSILKRQGHETIEDAREAALALQAAGAREAIVTMAARGIAVAGIEGAKTFPAV TARPIDITGAGDAMIAGTLHSILNGENTYAAARTGALLATLTTESTASVHTELSERFLEANMHRLVG
Sequences:
>Translated_387_residues MLSISKITKLQPSELDKMDDLAPQEAAVLAIIKDNPFAGQQEIASMLGLARSTVAAHIVQLMQKGYILGRGYVMPARTRA VCIGGAVLDHKYRAKEALVFETSNPVDGIRSLGGVARNVAENLALLGTSTSFVSIVGDDEGGRAILKHMRDRGIDVSQVV TTSERPTAEYAAILDPQGELVLGIADMGIFDLLLPNHIERIWPHLAAASWVFSDCNPPAEMLAALIAKRQGGARFKLAID AVSTPKAARLPKNLTGIDLLFMNIDEANSILKRQGHETIEDAREAALALQAAGAREAIVTMAARGIAVAGIEGAKTFPAV TARPIDITGAGDAMIAGTLHSILNGENTYAAARTGALLATLTTESTASVHTELSERFLEANMHRLVG >Mature_387_residues MLSISKITKLQPSELDKMDDLAPQEAAVLAIIKDNPFAGQQEIASMLGLARSTVAAHIVQLMQKGYILGRGYVMPARTRA VCIGGAVLDHKYRAKEALVFETSNPVDGIRSLGGVARNVAENLALLGTSTSFVSIVGDDEGGRAILKHMRDRGIDVSQVV TTSERPTAEYAAILDPQGELVLGIADMGIFDLLLPNHIERIWPHLAAASWVFSDCNPPAEMLAALIAKRQGGARFKLAID AVSTPKAARLPKNLTGIDLLFMNIDEANSILKRQGHETIEDAREAALALQAAGAREAIVTMAARGIAVAGIEGAKTFPAV TARPIDITGAGDAMIAGTLHSILNGENTYAAARTGALLATLTTESTASVHTELSERFLEANMHRLVG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788484, Length=345, Percent_Identity=32.463768115942, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788491, Length=275, Percent_Identity=29.0909090909091, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR011991 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 41013; Mature: 41013
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSISKITKLQPSELDKMDDLAPQEAAVLAIIKDNPFAGQQEIASMLGLARSTVAAHIVQ CCCHHHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LMQKGYILGRGYVMPARTRAVCIGGAVLDHKYRAKEALVFETSNPVDGIRSLGGVARNVA HHHCCEEEECCEECCCCCCEEEECCHHHCCHHHCCEEEEEECCCCHHHHHHHHHHHHHHH ENLALLGTSTSFVSIVGDDEGGRAILKHMRDRGIDVSQVVTTSERPTAEYAAILDPQGEL HHHEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHEECCCCCCCHHHEEECCCCCE VLGIADMGIFDLLLPNHIERIWPHLAAASWVFSDCNPPAEMLAALIAKRQGGARFKLAID EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEE AVSTPKAARLPKNLTGIDLLFMNIDEANSILKRQGHETIEDAREAALALQAAGAREAIVT CCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH MAARGIAVAGIEGAKTFPAVTARPIDITGAGDAMIAGTLHSILNGENTYAAARTGALLAT HHHCCEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHCCEEEEE LTTESTASVHTELSERFLEANMHRLVG EECCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSISKITKLQPSELDKMDDLAPQEAAVLAIIKDNPFAGQQEIASMLGLARSTVAAHIVQ CCCHHHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LMQKGYILGRGYVMPARTRAVCIGGAVLDHKYRAKEALVFETSNPVDGIRSLGGVARNVA HHHCCEEEECCEECCCCCCEEEECCHHHCCHHHCCEEEEEECCCCHHHHHHHHHHHHHHH ENLALLGTSTSFVSIVGDDEGGRAILKHMRDRGIDVSQVVTTSERPTAEYAAILDPQGEL HHHEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHEECCCCCCCHHHEEECCCCCE VLGIADMGIFDLLLPNHIERIWPHLAAASWVFSDCNPPAEMLAALIAKRQGGARFKLAID EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEE AVSTPKAARLPKNLTGIDLLFMNIDEANSILKRQGHETIEDAREAALALQAAGAREAIVT CCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH MAARGIAVAGIEGAKTFPAVTARPIDITGAGDAMIAGTLHSILNGENTYAAARTGALLAT HHHCCEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHCCEEEEE LTTESTASVHTELSERFLEANMHRLVG EECCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 2460435 [H]