| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is kipA [H]
Identifier: 116248824
GI number: 116248824
Start: 150205
End: 151176
Strand: Reverse
Name: kipA [H]
Synonym: pRL120150
Alternate gene names: 116248824
Gene position: 151176-150205 (Counterclockwise)
Preceding gene: 116248825
Following gene: 116248821
Centisome position: 17.38
GC content: 68.11
Gene sequence:
>972_bases ATGGCCATTAAGGTGCTGCACCCGGGACTATCGACCAGCGTCCAGGATCTCGGCCGTCCGGGCTATTTCCACCTCGGCAT CCCGATCGGCGGCGCCATGGACCGCTACGCCATGCGTGCCGCCAATCTGCTCGTCGGCAACGACGAAGGGGCGGCGGGTC TCGAGGCGGTCTTCATGGGACCGAAGCTCGAATTCGCCGAGGATGCCCTGGTGGCCGTCACCGGTGCCGACATGCCGGCC AAGGTCGACGGCGTGGGGCAGCCCGGCTGGACGGCTTTCAAGGTCAAGGCCGGCCAGGTGTTGAGCTTCGACTTCCTGAA ATCCGGCGCGCGCATCCTGATCGCGGTCGCGGGCGGCATCGACGTGCCGGAAGCGCTCGGCAGCCGCTCCACCTATCCGA TCGGCGCGCTCGGCGGCTACAAGGGCAGGGCGCTGGCAGCCGGCGACGCACTGCCGGTCGGAAAGGCCGGCCTTGCCGAG GAAGGAAAAAGCGTCGCCGAAGAGCTGCGGCGCAGACCCGGAACGCCGGCAGAGCTGCGCGTGCTGCCGGGGCTCTACTG GGACCGGCTGACGGATGCCGCCAAGGCGAGCTTCTTCGCCGACGAGTGGAAGGTGGCGCCTGAGGCCGACCGCATGGGCT ACCGCTTCCGCGGCGGGCGCAAGCTCGACTTCCTGGACCGCAAGCAGCCCTTCGGCGCCGGTTCCGATCCGTCGAACATC GTCGACAGCTGCTACCCCTACGGCTCGATTCAGGTGCCGGGCGGAACGGAGCCGATCATCCTTCATCGCGACGCTGTCTC CGGCGGCGGCTATTTCATGGTCGGCACGGTAATCTCGGCGGACATGGACCTCATCGGCCAGTTACAGCCGCATACACCGG CGCGGTTCGTCGAGGTGACGATGGATGAGGCGCTGAAGGCGAGGGCCGATCGCGCAGCGCTGCTCGACCGCCTCCGCCAG AGCCTGTCGTGA
Upstream 100 bases:
>100_bases AAGAAGCTCTTCAGCCCGCCGATCCGCGAGGTCCGGTTCGATCTTCGCGAATTCAGCAAGGATATCCACGGTTACAACGC CGCGCTGGAGGGCGTTCTCC
Downstream 100 bases:
>100_bases GGTGACGAGGATGGCCTGTCGATCACTCGACGTGCGTCAGGTAATCGGCGGTCACGCTCGGGCCGGGAATGATGGCGACG ATCTTCATCTGGGCGATCAT
Product: putative urea amidolyase related protein
Products: NA
Alternate protein names: Protein kipA [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAIKVLHPGLSTSVQDLGRPGYFHLGIPIGGAMDRYAMRAANLLVGNDEGAAGLEAVFMGPKLEFAEDALVAVTGADMPA KVDGVGQPGWTAFKVKAGQVLSFDFLKSGARILIAVAGGIDVPEALGSRSTYPIGALGGYKGRALAAGDALPVGKAGLAE EGKSVAEELRRRPGTPAELRVLPGLYWDRLTDAAKASFFADEWKVAPEADRMGYRFRGGRKLDFLDRKQPFGAGSDPSNI VDSCYPYGSIQVPGGTEPIILHRDAVSGGGYFMVGTVISADMDLIGQLQPHTPARFVEVTMDEALKARADRAALLDRLRQ SLS
Sequences:
>Translated_323_residues MAIKVLHPGLSTSVQDLGRPGYFHLGIPIGGAMDRYAMRAANLLVGNDEGAAGLEAVFMGPKLEFAEDALVAVTGADMPA KVDGVGQPGWTAFKVKAGQVLSFDFLKSGARILIAVAGGIDVPEALGSRSTYPIGALGGYKGRALAAGDALPVGKAGLAE EGKSVAEELRRRPGTPAELRVLPGLYWDRLTDAAKASFFADEWKVAPEADRMGYRFRGGRKLDFLDRKQPFGAGSDPSNI VDSCYPYGSIQVPGGTEPIILHRDAVSGGGYFMVGTVISADMDLIGQLQPHTPARFVEVTMDEALKARADRAALLDRLRQ SLS >Mature_322_residues AIKVLHPGLSTSVQDLGRPGYFHLGIPIGGAMDRYAMRAANLLVGNDEGAAGLEAVFMGPKLEFAEDALVAVTGADMPAK VDGVGQPGWTAFKVKAGQVLSFDFLKSGARILIAVAGGIDVPEALGSRSTYPIGALGGYKGRALAAGDALPVGKAGLAEE GKSVAEELRRRPGTPAELRVLPGLYWDRLTDAAKASFFADEWKVAPEADRMGYRFRGGRKLDFLDRKQPFGAGSDPSNIV DSCYPYGSIQVPGGTEPIILHRDAVSGGGYFMVGTVISADMDLIGQLQPHTPARFVEVTMDEALKARADRAALLDRLRQS LS
Specific function: Counteracts the inhibitory action of kipI on sporulation. May bind to kipI, preventing its function as an inhibitor of kinase A [H]
COG id: COG1984
COG function: function code E; Allophanate hydrolase subunit 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786930, Length=319, Percent_Identity=36.3636363636364, Blast_Score=181, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6319685, Length=325, Percent_Identity=34.4615384615385, Blast_Score=159, Evalue=4e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003778 [H]
Pfam domain/function: PF02626 AHS2 [H]
EC number: NA
Molecular weight: Translated: 34144; Mature: 34013
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKVLHPGLSTSVQDLGRPGYFHLGIPIGGAMDRYAMRAANLLVGNDEGAAGLEAVFMG CEEEEECCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCEEEEEEC PKLEFAEDALVAVTGADMPAKVDGVGQPGWTAFKVKAGQVLSFDFLKSGARILIAVAGGI CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHCCCEEEEEEECCC DVPEALGSRSTYPIGALGGYKGRALAAGDALPVGKAGLAEEGKSVAEELRRRPGTPAELR CCHHHHCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE VLPGLYWDRLTDAAKASFFADEWKVAPEADRMGYRFRGGRKLDFLDRKQPFGAGSDPSNI ECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCEECCCCCCCCCCCCCCHHHH VDSCYPYGSIQVPGGTEPIILHRDAVSGGGYFMVGTVISADMDLIGQLQPHTPARFVEVT HHHHCCCCCEECCCCCCCEEEEECCCCCCCEEEEEEHHHCCHHHHHCCCCCCCHHEEEEE MDEALKARADRAALLDRLRQSLS HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AIKVLHPGLSTSVQDLGRPGYFHLGIPIGGAMDRYAMRAANLLVGNDEGAAGLEAVFMG EEEEECCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCEEEEEEC PKLEFAEDALVAVTGADMPAKVDGVGQPGWTAFKVKAGQVLSFDFLKSGARILIAVAGGI CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHCCCEEEEEEECCC DVPEALGSRSTYPIGALGGYKGRALAAGDALPVGKAGLAEEGKSVAEELRRRPGTPAELR CCHHHHCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE VLPGLYWDRLTDAAKASFFADEWKVAPEADRMGYRFRGGRKLDFLDRKQPFGAGSDPSNI ECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCEECCCCCCCCCCCCCCHHHH VDSCYPYGSIQVPGGTEPIILHRDAVSGGGYFMVGTVISADMDLIGQLQPHTPARFVEVT HHHHCCCCCEECCCCCCCEEEEECCCCCCCEEEEEEHHHCCHHHHHCCCCCCCHHEEEEE MDEALKARADRAALLDRLRQSLS HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377; 10568751 [H]