Click here to switch to the map view.

The map label for this gene is 116248779

Identifier: 116248779

GI number: 116248779

Start: 98938

End: 99201

Strand: Reverse

Name: 116248779

Synonym: pRL120103

Alternate gene names: NA

Gene position: 99201-98938 (Counterclockwise)

Preceding gene: 116248793

Following gene: 116248777

Centisome position: 11.4

GC content: 57.2

Gene sequence:

>264_bases
ATGCAAATCCTCATCGCACGGCGCCTGACTGCCCCAATTTATGACAGTTATATTGCGCTGCGTTATCACCTATTGCAATG
CCGCAAATCCGTTCTCTGCAACTGTACCGGAGCCAGCCATTTCGCCGATCTCCAGATCGAGATGATCAGTCGCCCTGCAG
GTGACCAAGACGGTCAGGAACTGCAAATGTCGCCAACCCACTCGCCCACGCGACCCGCATATGCCCCGGCGGCGACGCTC
ATGGGTCACTCGCCGGGAAACTAG

Upstream 100 bases:

>100_bases
GACCTTAATTTTGGTCCATTTGTCTATCTTGGTATCCGAAGGTATGGGCAAATCCTCTCGCAGCAAGAGGGTAAGCTCAG
GTGCCCTATCCGACTTATAG

Downstream 100 bases:

>100_bases
CGTCTAGGCTCCCCAGACCACTGACTGCTCGTGCCGCTTGATCAGATGCTTGAGGTTATCGAAGCCTGTGCGGATGTGGC
GGGCGAAGTGATCGGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MQILIARRLTAPIYDSYIALRYHLLQCRKSVLCNCTGASHFADLQIEMISRPAGDQDGQELQMSPTHSPTRPAYAPAATL
MGHSPGN

Sequences:

>Translated_87_residues
MQILIARRLTAPIYDSYIALRYHLLQCRKSVLCNCTGASHFADLQIEMISRPAGDQDGQELQMSPTHSPTRPAYAPAATL
MGHSPGN
>Mature_87_residues
MQILIARRLTAPIYDSYIALRYHLLQCRKSVLCNCTGASHFADLQIEMISRPAGDQDGQELQMSPTHSPTRPAYAPAATL
MGHSPGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9569; Mature: 9569

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQILIARRLTAPIYDSYIALRYHLLQCRKSVLCNCTGASHFADLQIEMISRPAGDQDGQE
CEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCCCCCE
LQMSPTHSPTRPAYAPAATLMGHSPGN
EEECCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MQILIARRLTAPIYDSYIALRYHLLQCRKSVLCNCTGASHFADLQIEMISRPAGDQDGQE
CEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCCCCCE
LQMSPTHSPTRPAYAPAATLMGHSPGN
EEECCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA