| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is eutB [C]
Identifier: 116248728
GI number: 116248728
Start: 51198
End: 52199
Strand: Direct
Name: eutB [C]
Synonym: pRL120052
Alternate gene names: 116248728
Gene position: 51198-52199 (Clockwise)
Preceding gene: 116248727
Following gene: 116248729
Centisome position: 5.88
GC content: 66.37
Gene sequence:
>1002_bases ATGGTGAGCACCTTGCCCGTTTCGCTGGAGGATATCCGCGCTGCGGCGCGCCGGATTGCCGGCCGCGTGATCGGCACACC GATGGTGCAGTCCTTTTCCCTTGGCGAATTGGCCGGCGTACCTGTCCATCTCAAGCTCGAACATCATCAGACGACCGGCA GCTTCAAGCTGCGCGGCGCGACCAATGCGGTGCTCTCCTTGTCGCCGGCCGAGCGCTCGCGCGGCGTCGTCGCGGCCTCG ACCGGAAATCACGGCCGTGCGCTTGCCTATGCGGCAAAGGCGGAAGGGGCGGTTGCGACCATCTGCATGTCGCGGCTGGT GCCGGACAACAAGGTTTCGGAAAGCCGCCGCCTCGGTGCCGATGTCCGCATCGTCGGCGGATCGCAGGACGAGGCGCAGC AGGAAGTCGAGCGGCTGGTTCGCGAGGAGGGGCTGGTGATGGTCCCGCCCTTCGACCATCCTGATGTCGTGGCCGGGCAG GGGACGCTGGGGCTCGAAATCATCGACATCTTGCCGGAGGCGGCAATCGTGCTGGTGCCGCTCTCGGGCGGCGGCCTTGC GGCCGGCGTTGCCGCTGCGGTCAAAGGCATCAGTCCGACGACCAAAGTGATCGGCCTGACGATGGAGAAGGGCGCCGCGA TGAAGGCGAGCCTCGATGCCGGACGGCCGGTGCAGGTCGAGGAGGTATCGAGCCTTGCCGACTCGCTCGGCGGCGGCATC GGCCTCGACAATCGCGTGACCTTTGCCATGTGCCGCGAACTTCTCGACGACGTCATCCTGCTGACGGAGGTGGAAATCGC CGTGGGCATGCGCCATGCCTATGCCTGCGAACGCCAGATCGTCGAGGGCGCTGGCGCGGTCGGCATTGCAGCGTTGCTTG CCGGGAAGATTGTGGGGAACGGCCCCATCGTCGCGATCCTGTCCGGGGCGAATGTCGACATGGAGCAGCATCGGCGGGTG ATCAATGGCAAGGCGGCACTCTGCGGCGAGGAGAGACCATGA
Upstream 100 bases:
>100_bases CTCGCGACCGCCTGGGCTTGCCTGCGGCTTTGCGGCGATGATCTGGCGCGGCCCGAACTCGGTCAATTGATGACCAAGCC CTATCGGGAAGGCTGAGATC
Downstream 100 bases:
>100_bases GCCGGATGATCATTCTGACGGAAGCGGAACTGAGGAAAGTCATCGCGCTTGATCGCGATACGGTTGATTGCGTCGAGGCC GCTTTCGCAGCGCTTGCGAC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MVSTLPVSLEDIRAAARRIAGRVIGTPMVQSFSLGELAGVPVHLKLEHHQTTGSFKLRGATNAVLSLSPAERSRGVVAAS TGNHGRALAYAAKAEGAVATICMSRLVPDNKVSESRRLGADVRIVGGSQDEAQQEVERLVREEGLVMVPPFDHPDVVAGQ GTLGLEIIDILPEAAIVLVPLSGGGLAAGVAAAVKGISPTTKVIGLTMEKGAAMKASLDAGRPVQVEEVSSLADSLGGGI GLDNRVTFAMCRELLDDVILLTEVEIAVGMRHAYACERQIVEGAGAVGIAALLAGKIVGNGPIVAILSGANVDMEQHRRV INGKAALCGEERP
Sequences:
>Translated_333_residues MVSTLPVSLEDIRAAARRIAGRVIGTPMVQSFSLGELAGVPVHLKLEHHQTTGSFKLRGATNAVLSLSPAERSRGVVAAS TGNHGRALAYAAKAEGAVATICMSRLVPDNKVSESRRLGADVRIVGGSQDEAQQEVERLVREEGLVMVPPFDHPDVVAGQ GTLGLEIIDILPEAAIVLVPLSGGGLAAGVAAAVKGISPTTKVIGLTMEKGAAMKASLDAGRPVQVEEVSSLADSLGGGI GLDNRVTFAMCRELLDDVILLTEVEIAVGMRHAYACERQIVEGAGAVGIAALLAGKIVGNGPIVAILSGANVDMEQHRRV INGKAALCGEERP >Mature_333_residues MVSTLPVSLEDIRAAARRIAGRVIGTPMVQSFSLGELAGVPVHLKLEHHQTTGSFKLRGATNAVLSLSPAERSRGVVAAS TGNHGRALAYAAKAEGAVATICMSRLVPDNKVSESRRLGADVRIVGGSQDEAQQEVERLVREEGLVMVPPFDHPDVVAGQ GTLGLEIIDILPEAAIVLVPLSGGGLAAGVAAAVKGISPTTKVIGLTMEKGAAMKASLDAGRPVQVEEVSSLADSLGGGI GLDNRVTFAMCRELLDDVILLTEVEIAVGMRHAYACERQIVEGAGAVGIAALLAGKIVGNGPIVAILSGANVDMEQHRRV INGKAALCGEERP
Specific function: Acts On Both Serine And Threonine, And Properly Considered As A Hydroxy Amino Acid Deaminase. [C]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=323, Percent_Identity=34.6749226006192, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI19923959, Length=272, Percent_Identity=31.9852941176471, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI33469958, Length=316, Percent_Identity=26.8987341772152, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1789505, Length=315, Percent_Identity=38.7301587301587, Blast_Score=178, Evalue=5e-46, Organism=Escherichia coli, GI1790207, Length=298, Percent_Identity=36.5771812080537, Blast_Score=154, Evalue=8e-39, Organism=Caenorhabditis elegans, GI71991565, Length=313, Percent_Identity=37.0607028753994, Blast_Score=164, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17537387, Length=308, Percent_Identity=37.6623376623377, Blast_Score=138, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17508781, Length=320, Percent_Identity=27.8125, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322631, Length=315, Percent_Identity=35.5555555555556, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320930, Length=332, Percent_Identity=34.6385542168675, Blast_Score=155, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6319788, Length=249, Percent_Identity=28.1124497991968, Blast_Score=82, Evalue=9e-17, Organism=Drosophila melanogaster, GI21355833, Length=310, Percent_Identity=39.0322580645161, Blast_Score=154, Evalue=7e-38, Organism=Drosophila melanogaster, GI24645328, Length=214, Percent_Identity=38.3177570093458, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014333 - InterPro: IPR001926 - InterPro: IPR000634 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 34355; Mature: 34355
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTLPVSLEDIRAAARRIAGRVIGTPMVQSFSLGELAGVPVHLKLEHHQTTGSFKLRGA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHCCCCEEEEEECCCCCCCEEECCC TNAVLSLSPAERSRGVVAASTGNHGRALAYAAKAEGAVATICMSRLVPDNKVSESRRLGA CCEEEEECCCHHHCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCC DVRIVGGSQDEAQQEVERLVREEGLVMVPPFDHPDVVAGQGTLGLEIIDILPEAAIVLVP CEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEECCCCCCHHHHHHCCCCEEEEEE LSGGGLAAGVAAAVKGISPTTKVIGLTMEKGAAMKASLDAGRPVQVEEVSSLADSLGGGI ECCCCHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC GLDNRVTFAMCRELLDDVILLTEVEIAVGMRHAYACERQIVEGAGAVGIAALLAGKIVGN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECC GPIVAILSGANVDMEQHRRVINGKAALCGEERP CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVSTLPVSLEDIRAAARRIAGRVIGTPMVQSFSLGELAGVPVHLKLEHHQTTGSFKLRGA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHCCCCEEEEEECCCCCCCEEECCC TNAVLSLSPAERSRGVVAASTGNHGRALAYAAKAEGAVATICMSRLVPDNKVSESRRLGA CCEEEEECCCHHHCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCC DVRIVGGSQDEAQQEVERLVREEGLVMVPPFDHPDVVAGQGTLGLEIIDILPEAAIVLVP CEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEECCCCCCHHHHHHCCCCEEEEEE LSGGGLAAGVAAAVKGISPTTKVIGLTMEKGAAMKASLDAGRPVQVEEVSSLADSLGGGI ECCCCHHHHHHHHHCCCCCCHHEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC GLDNRVTFAMCRELLDDVILLTEVEIAVGMRHAYACERQIVEGAGAVGIAALLAGKIVGN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECC GPIVAILSGANVDMEQHRRVINGKAALCGEERP CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]