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The map label for this gene is 116248727

Identifier: 116248727

GI number: 116248727

Start: 50414

End: 51193

Strand: Direct

Name: 116248727

Synonym: pRL120051

Alternate gene names: NA

Gene position: 50414-51193 (Clockwise)

Preceding gene: 116248726

Following gene: 116248728

Centisome position: 5.79

GC content: 65.51

Gene sequence:

>780_bases
ATGACCGTAGAGATTGAGATCATCACAGCCGGCCGGCCGCCGCGGCTGGAGGACCGGCCGCTGGAAAAGCGCATCGGCTT
GGTCATCCTCGCGACGGACCACACGACGGAAGTCGACTTCCAGCGCATGGTCGCCAGCGATCGCCTCGGCGTCTATGTCA
GCCGCATCCACTATGCCAATCCGGTCACGCCGGAAAACCTCTTGAGGATGCAGCCGTCGTTGACCGAAGGCGCGGCACTG
ATCCTGCCGGGCGAGACGCTCGATGCCATCGTCTATTCCTGCACCTCCGCCTCGGTCGTGATCGGCGACCGGAACATCGA
GGCGGCGATCCATGCCGCCAAGCCCGGCGTTCCCGTCGTGACGCCGACGGCGGCCGCCGTGAAGGGTCTGAAGGCGCTTG
GCGCCAGACGGATTTCGGTGCTGACGCCCTATACGATCGAGACCAGCCGGCCGATGGCGGATTATTTCGCGGATCTCGGC
TTTGCGATCGACCGCTTCACCTGTCTCGGGCTGACCGATGACCGCGAGATGGCGCGGATCGCGCCGGACGAGATCCTTGC
CTTCGCGCGCCAGGCGCTGGCGCCGCACTCGGACGCGCTGTTTATCTCCTGCACGGCGGTGCGGGCAGCAGAGGTCGCGG
CCCGGATCGAGGCTGAAATCGGCAAGCCAGTCGTCACTAGCAATCTCGCGACCGCCTGGGCTTGCCTGCGGCTTTGCGGC
GATGATCTGGCGCGGCCCGAACTCGGTCAATTGATGACCAAGCCCTATCGGGAAGGCTGA

Upstream 100 bases:

>100_bases
CGATGACGCTGGTCGGCATCTTCTTCCTCGTCATCAGCCTGATTTCGGTGGTGGGATTACGCTGGCTTGAGGAACGCTAC
GCCAGGATGGATGACTGACC

Downstream 100 bases:

>100_bases
GATCATGGTGAGCACCTTGCCCGTTTCGCTGGAGGATATCCGCGCTGCGGCGCGCCGGATTGCCGGCCGCGTGATCGGCA
CACCGATGGTGCAGTCCTTT

Product: putative arylmalonate decarboxylase

Products: NA

Alternate protein names: AMDase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTVEIEIITAGRPPRLEDRPLEKRIGLVILATDHTTEVDFQRMVASDRLGVYVSRIHYANPVTPENLLRMQPSLTEGAAL
ILPGETLDAIVYSCTSASVVIGDRNIEAAIHAAKPGVPVVTPTAAAVKGLKALGARRISVLTPYTIETSRPMADYFADLG
FAIDRFTCLGLTDDREMARIAPDEILAFARQALAPHSDALFISCTAVRAAEVAARIEAEIGKPVVTSNLATAWACLRLCG
DDLARPELGQLMTKPYREG

Sequences:

>Translated_259_residues
MTVEIEIITAGRPPRLEDRPLEKRIGLVILATDHTTEVDFQRMVASDRLGVYVSRIHYANPVTPENLLRMQPSLTEGAAL
ILPGETLDAIVYSCTSASVVIGDRNIEAAIHAAKPGVPVVTPTAAAVKGLKALGARRISVLTPYTIETSRPMADYFADLG
FAIDRFTCLGLTDDREMARIAPDEILAFARQALAPHSDALFISCTAVRAAEVAARIEAEIGKPVVTSNLATAWACLRLCG
DDLARPELGQLMTKPYREG
>Mature_258_residues
TVEIEIITAGRPPRLEDRPLEKRIGLVILATDHTTEVDFQRMVASDRLGVYVSRIHYANPVTPENLLRMQPSLTEGAALI
LPGETLDAIVYSCTSASVVIGDRNIEAAIHAAKPGVPVVTPTAAAVKGLKALGARRISVLTPYTIETSRPMADYFADLGF
AIDRFTCLGLTDDREMARIAPDEILAFARQALAPHSDALFISCTAVRAAEVAARIEAEIGKPVVTSNLATAWACLRLCGD
DLARPELGQLMTKPYREG

Specific function: Unknown

COG id: COG3473

COG function: function code Q; Maleate cis-trans isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =4.1.1.76 [H]

Molecular weight: Translated: 27950; Mature: 27818

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEIEIITAGRPPRLEDRPLEKRIGLVILATDHTTEVDFQRMVASDRLGVYVSRIHYAN
CEEEEEEEECCCCCCCCCCCHHHHCCEEEEEECCCCHHHHHHHHHCCCHHEEEEEEECCC
PVTPENLLRMQPSLTEGAALILPGETLDAIVYSCTSASVVIGDRNIEAAIHAAKPGVPVV
CCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEE
TPTAAAVKGLKALGARRISVLTPYTIETSRPMADYFADLGFAIDRFTCLGLTDDREMARI
CCHHHHHHHHHHHCCCEEEEECCEEEECCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHC
APDEILAFARQALAPHSDALFISCTAVRAAEVAARIEAEIGKPVVTSNLATAWACLRLCG
CHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DDLARPELGQLMTKPYREG
HHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
TVEIEIITAGRPPRLEDRPLEKRIGLVILATDHTTEVDFQRMVASDRLGVYVSRIHYAN
EEEEEEEECCCCCCCCCCCHHHHCCEEEEEECCCCHHHHHHHHHCCCHHEEEEEEECCC
PVTPENLLRMQPSLTEGAALILPGETLDAIVYSCTSASVVIGDRNIEAAIHAAKPGVPVV
CCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEE
TPTAAAVKGLKALGARRISVLTPYTIETSRPMADYFADLGFAIDRFTCLGLTDDREMARI
CCHHHHHHHHHHHCCCEEEEECCEEEECCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHC
APDEILAFARQALAPHSDALFISCTAVRAAEVAARIEAEIGKPVVTSNLATAWACLRLCG
CHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DDLARPELGQLMTKPYREG
HHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1369144 [H]