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The map label for this gene is 116248682

Identifier: 116248682

GI number: 116248682

Start: 5398

End: 6726

Strand: Direct

Name: 116248682

Synonym: pRL120006

Alternate gene names: NA

Gene position: 5398-6726 (Clockwise)

Preceding gene: 116248681

Following gene: 116248683

Centisome position: 0.62

GC content: 61.55

Gene sequence:

>1329_bases
ATGTCATCGTTTTTGAACCCGACGAGGCGCGGCTTTCTGGCGGGTACGGCCGCTTTTGGCGCCAGCAACATGCTCGGCGT
CCGGTTGGCATCGGCTGCCGTCGATTGGAAGCGCTTTGCCGGCACGACGCTCGAAGTCAACCTGGTCAAGAGCCCGCGCA
GCGAAATACTTCTGAAGTACCTGTCCGAATTCGAGGAGCTCACCGGCATCAAGGTCAATGCCGAAGCGACGCCCGAACAA
CAGCAGCGTCAGAAGACGACCATCGAGCTGAGTTCCGGCAAGCCGAGCTTCGATGTCGTGCACATGAGCTATCATGTCCA
GAAGCGGCAGTTCGAAAAGGGCGGCTGGCTTGCCGATATCGGCGGCTTTCTCAAGGACCCCTCACTGACCGACCCGTCTC
TGGTTGAAAGCGACTTCGCCGAAGCCGGCCTGACTTTTGCCAAGGATCCGGGCGGCGTTCTGCGTTCGCTTCCATTCTCG
GTCGACTACTGGATCATCTACTGGAACAAGGCGTTGTTCGAGAAGAAGGGGCTGGCCTACCCGACGACGTTCGAAGAACT
CGCCAGTGCTGCGGAGGCGCTCACCGATCCTTCCACCAACACCTACGGCTTCGTCGCCCGCGGCCTGAAGAACGCCAATA
CGCCGGTCTGGACGTCGCTGTTGCTCGGCTATGGTTCGAGCCCGCTCGGCCCTGATGGCAAGCTGCGCACGACATCGCAA
GAAGCGATCGATGCGGCCAAGCTTTACCAAAGACTGATGACCAAGACCGCCCCTCCCGGCGTTTCCGGCTTCAACTGGGC
CGAGGCGCAGTCGGCCTTCCTGCAAGGCAAGATCGGCATGTGGCTGGACGGCGTCGGTTTTGCGCCGCCGATCGAGAATC
CCGAAAAGTCGCGTGTCGTTGGCCAGGTCGGTTACGGCATCATGCCGAAAGGTCCGAAGGCACAGGCCGCAGGCACCTTC
GGTGACGGCCTTGGCGTCGTCGCGGCAAGCCAGAAGAAAGAAGCCGGGTACCTCTTCTGCCAATGGGCGATTTCGCATGA
AATGGGTGCACGTCTGCTGCAGGCCGGCGCCGGCGTTCCCTTCCGCCAGTCCGTCCTCGAGGATGCGAAGGTCCGCGAAG
GCGTCAAGATGCCGGGCGCCTGGCTTGATGCCGTCGTTGGTTCCGGCAAGATCTCGCAGCTCGCGCTGCCGGTCATCATT
CCGGTCACCGAGTTCCGCGACGTCTATGGTGTCGGTCTCACAAACATGATCGGCGGCGCCGATCCCGAAACCGAGCTGAA
GGCAGCGACGGCACAGTTCGAACCCGTCCTGGCGAAAAGCGAGGGATAA

Upstream 100 bases:

>100_bases
GTCGCACATATCAATCATGCAAGAGATCGTGCGCTCAGGATATAATCGGAAATAAACAGCCGGGGATGAGGAGATCGCCG
GCAAAAGGAGGAGGAATCAC

Downstream 100 bases:

>100_bases
TGGCCTCGACAAGCATCGAAACGGCCGCAGTGGCCAAGACGTCGAAAGGAAGGAGCAAACCGGATCGGTTTGCTCCCAAC
TACTGGCCTTTCGTTATCCC

Product: putative substrate-binding component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSSFLNPTRRGFLAGTAAFGASNMLGVRLASAAVDWKRFAGTTLEVNLVKSPRSEILLKYLSEFEELTGIKVNAEATPEQ
QQRQKTTIELSSGKPSFDVVHMSYHVQKRQFEKGGWLADIGGFLKDPSLTDPSLVESDFAEAGLTFAKDPGGVLRSLPFS
VDYWIIYWNKALFEKKGLAYPTTFEELASAAEALTDPSTNTYGFVARGLKNANTPVWTSLLLGYGSSPLGPDGKLRTTSQ
EAIDAAKLYQRLMTKTAPPGVSGFNWAEAQSAFLQGKIGMWLDGVGFAPPIENPEKSRVVGQVGYGIMPKGPKAQAAGTF
GDGLGVVAASQKKEAGYLFCQWAISHEMGARLLQAGAGVPFRQSVLEDAKVREGVKMPGAWLDAVVGSGKISQLALPVII
PVTEFRDVYGVGLTNMIGGADPETELKAATAQFEPVLAKSEG

Sequences:

>Translated_442_residues
MSSFLNPTRRGFLAGTAAFGASNMLGVRLASAAVDWKRFAGTTLEVNLVKSPRSEILLKYLSEFEELTGIKVNAEATPEQ
QQRQKTTIELSSGKPSFDVVHMSYHVQKRQFEKGGWLADIGGFLKDPSLTDPSLVESDFAEAGLTFAKDPGGVLRSLPFS
VDYWIIYWNKALFEKKGLAYPTTFEELASAAEALTDPSTNTYGFVARGLKNANTPVWTSLLLGYGSSPLGPDGKLRTTSQ
EAIDAAKLYQRLMTKTAPPGVSGFNWAEAQSAFLQGKIGMWLDGVGFAPPIENPEKSRVVGQVGYGIMPKGPKAQAAGTF
GDGLGVVAASQKKEAGYLFCQWAISHEMGARLLQAGAGVPFRQSVLEDAKVREGVKMPGAWLDAVVGSGKISQLALPVII
PVTEFRDVYGVGLTNMIGGADPETELKAATAQFEPVLAKSEG
>Mature_441_residues
SSFLNPTRRGFLAGTAAFGASNMLGVRLASAAVDWKRFAGTTLEVNLVKSPRSEILLKYLSEFEELTGIKVNAEATPEQQ
QRQKTTIELSSGKPSFDVVHMSYHVQKRQFEKGGWLADIGGFLKDPSLTDPSLVESDFAEAGLTFAKDPGGVLRSLPFSV
DYWIIYWNKALFEKKGLAYPTTFEELASAAEALTDPSTNTYGFVARGLKNANTPVWTSLLLGYGSSPLGPDGKLRTTSQE
AIDAAKLYQRLMTKTAPPGVSGFNWAEAQSAFLQGKIGMWLDGVGFAPPIENPEKSRVVGQVGYGIMPKGPKAQAAGTFG
DGLGVVAASQKKEAGYLFCQWAISHEMGARLLQAGAGVPFRQSVLEDAKVREGVKMPGAWLDAVVGSGKISQLALPVIIP
VTEFRDVYGVGLTNMIGGADPETELKAATAQFEPVLAKSEG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47354; Mature: 47223

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFLNPTRRGFLAGTAAFGASNMLGVRLASAAVDWKRFAGTTLEVNLVKSPRSEILLKY
CCCCCCCHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
LSEFEELTGIKVNAEATPEQQQRQKTTIELSSGKPSFDVVHMSYHVQKRQFEKGGWLADI
HHHHHHHCCEEEECCCCCHHHHHHCCEEEECCCCCCEEEEEEEHHHHHHHHHCCCCCHHH
GGFLKDPSLTDPSLVESDFAEAGLTFAKDPGGVLRSLPFSVDYWIIYWNKALFEKKGLAY
HHHHCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHCCCCEEEEEEEECHHHHHHCCCCC
PTTFEELASAAEALTDPSTNTYGFVARGLKNANTPVWTSLLLGYGSSPLGPDGKLRTTSQ
CCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEECCHH
EAIDAAKLYQRLMTKTAPPGVSGFNWAEAQSAFLQGKIGMWLDGVGFAPPIENPEKSRVV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHH
GQVGYGIMPKGPKAQAAGTFGDGLGVVAASQKKEAGYLFCQWAISHEMGARLLQAGAGVP
HHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHCCCCC
FRQSVLEDAKVREGVKMPGAWLDAVVGSGKISQLALPVIIPVTEFRDVYGVGLTNMIGGA
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHEECEEEEEHHHHHHHHCCCHHHHHCCC
DPETELKAATAQFEPVLAKSEG
CCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSFLNPTRRGFLAGTAAFGASNMLGVRLASAAVDWKRFAGTTLEVNLVKSPRSEILLKY
CCCCCCHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH
LSEFEELTGIKVNAEATPEQQQRQKTTIELSSGKPSFDVVHMSYHVQKRQFEKGGWLADI
HHHHHHHCCEEEECCCCCHHHHHHCCEEEECCCCCCEEEEEEEHHHHHHHHHCCCCCHHH
GGFLKDPSLTDPSLVESDFAEAGLTFAKDPGGVLRSLPFSVDYWIIYWNKALFEKKGLAY
HHHHCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHCCCCEEEEEEEECHHHHHHCCCCC
PTTFEELASAAEALTDPSTNTYGFVARGLKNANTPVWTSLLLGYGSSPLGPDGKLRTTSQ
CCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEECCHH
EAIDAAKLYQRLMTKTAPPGVSGFNWAEAQSAFLQGKIGMWLDGVGFAPPIENPEKSRVV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHH
GQVGYGIMPKGPKAQAAGTFGDGLGVVAASQKKEAGYLFCQWAISHEMGARLLQAGAGVP
HHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHCCCCC
FRQSVLEDAKVREGVKMPGAWLDAVVGSGKISQLALPVIIPVTEFRDVYGVGLTNMIGGA
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHEECEEEEEHHHHHHHHCCCHHHHHCCC
DPETELKAATAQFEPVLAKSEG
CCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]