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The map label for this gene is smf [H]

Identifier: 115353234

GI number: 115353234

Start: 3518241

End: 3519509

Strand: Direct

Name: smf [H]

Synonym: Bamb_3183

Alternate gene names: 115353234

Gene position: 3518241-3519509 (Clockwise)

Preceding gene: 115353220

Following gene: 115353235

Centisome position: 98.92

GC content: 74.39

Gene sequence:

>1269_bases
ATGTCGCCGCAAGCGCTGACCCCTTCCGCGCTGCGCGCGTGGCTGCAGCTCGCGCATGCGCCGGGCCTCCCGCCTGCCGT
GCTGCACGCGCTGCTCGACGCATTCGGCTCGCCGGCGGCGCTGCTGCGCGCATCCGACGAGGCCATCTGCGCGGCGAGCA
GCGCGGCCGCGGCGCGGGCGGTGCGCGCCAGCGAGCGGCACGACCTCGACGCGCGCACCGACGCTGCGCTCGCGTGGCTC
GATGCACCGGGCAACGCGATCGTCACGCTCAACGATCCCGTCTATCCGCCGCGGCTGCGCGACCTGCACGATCCGCCGCC
GCTGCTATATGTAAAGGGCAGGCTCGAGCTGCTGCACGCACGGGGGCTCGCCGTCGTCGGCAGCCGCCACGCAACGCCGC
AAGGGCTCGCCGACGCCACGCGCTTCGCGCATGCGCTGTCCGATGCGGGGCTCGCGATCGTCTCGGGCCTCGCGCTCGGC
ATCGACGGCGCCGCGCATCGCGGCGGGCTCGCCGGCCGCGCCAGCACGATCGCGGTGATCGCGACGGGCGCCGACCTCGT
CTATCCGGCGCGGCACCGCACGCTCGCGCACGAGATCGCCGCGCGTGGCGCGATCCTGTCCGAATGGCCGCTCGGCACGC
CGGCGCGAGCGTCGCATTTCCCGCAGCGCAATCGGCTGATCGCCGCACTCGCCGTGGGCGCGCTCGTCGTCGAAGCCGCG
CCGCGCTCCGGCTCGCTGATCACCGCGCGGCTCGCGAACGAGCTGGGCCGCGACGTGTTCGCGATGCCGGGCTCGATCCA
CGCGCCGCTCGCGCAGGGCTGCCACGCGCTGATCCGCGACGGCGCGAAGCTCACCGCGGCGCCGCTCGACGTGCTGGAGG
AATACGGGCTGGGCGAAGCGACTGCTCACATCGCGCAGCATTCTGGATCGAGCCCCGATAACGTCGAAGCAGCCGGCACG
GCGGAGCAACGCATGGGCGAGCCTGCCGCGAAGGCCGGCTCCGCCGTTGCGGCCGCCGCGTCCCCCGTAAGCGAAGGCGC
ACCGCCCGATACCCCCGCCGAACGATCCGTGCTGGCCGCGCTGGGATACGGCCCCGTGACCTACGAGTGGCTCGCCGAGC
ACAGCGGCCTGTCCGACGACGTGCTGTACAGCGCGTTGCTCGCGCTCGAACTGGCCGGCCGCGTCGCCAGCGTGCCCGGC
GGACGCTTCGCGCGGCTTGACGCGGCGCCCACCCCGCCCCGGTCCGGCGTGCTACATTCCCCCGAATAG

Upstream 100 bases:

>100_bases
CGGACGCCGGTGGCGCGCGGCCCTGTCGAGTATTTCGGATGATGAAAATTTTATCATGGCGCCACGCTGTCCGCTGGCCG
TCGCATTCGAGGGGAACCTC

Downstream 100 bases:

>100_bases
GGGCGGCCATGCCGTCGACGTTACCCAAGGAATTCCATGCCCGCGCTGAATCTCGACACCGATGCCGATCGGATCGCCGA
GCGCCTCGCCGATCCCGACA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSPQALTPSALRAWLQLAHAPGLPPAVLHALLDAFGSPAALLRASDEAICAASSAAAARAVRASERHDLDARTDAALAWL
DAPGNAIVTLNDPVYPPRLRDLHDPPPLLYVKGRLELLHARGLAVVGSRHATPQGLADATRFAHALSDAGLAIVSGLALG
IDGAAHRGGLAGRASTIAVIATGADLVYPARHRTLAHEIAARGAILSEWPLGTPARASHFPQRNRLIAALAVGALVVEAA
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEATAHIAQHSGSSPDNVEAAGT
AEQRMGEPAAKAGSAVAAAASPVSEGAPPDTPAERSVLAALGYGPVTYEWLAEHSGLSDDVLYSALLALELAGRVASVPG
GRFARLDAAPTPPRSGVLHSPE

Sequences:

>Translated_422_residues
MSPQALTPSALRAWLQLAHAPGLPPAVLHALLDAFGSPAALLRASDEAICAASSAAAARAVRASERHDLDARTDAALAWL
DAPGNAIVTLNDPVYPPRLRDLHDPPPLLYVKGRLELLHARGLAVVGSRHATPQGLADATRFAHALSDAGLAIVSGLALG
IDGAAHRGGLAGRASTIAVIATGADLVYPARHRTLAHEIAARGAILSEWPLGTPARASHFPQRNRLIAALAVGALVVEAA
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEATAHIAQHSGSSPDNVEAAGT
AEQRMGEPAAKAGSAVAAAASPVSEGAPPDTPAERSVLAALGYGPVTYEWLAEHSGLSDDVLYSALLALELAGRVASVPG
GRFARLDAAPTPPRSGVLHSPE
>Mature_421_residues
SPQALTPSALRAWLQLAHAPGLPPAVLHALLDAFGSPAALLRASDEAICAASSAAAARAVRASERHDLDARTDAALAWLD
APGNAIVTLNDPVYPPRLRDLHDPPPLLYVKGRLELLHARGLAVVGSRHATPQGLADATRFAHALSDAGLAIVSGLALGI
DGAAHRGGLAGRASTIAVIATGADLVYPARHRTLAHEIAARGAILSEWPLGTPARASHFPQRNRLIAALAVGALVVEAAP
RSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEATAHIAQHSGSSPDNVEAAGTA
EQRMGEPAAKAGSAVAAAASPVSEGAPPDTPAERSVLAALGYGPVTYEWLAEHSGLSDDVLYSALLALELAGRVASVPGG
RFARLDAAPTPPRSGVLHSPE

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=347, Percent_Identity=37.7521613832853, Blast_Score=189, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 43078; Mature: 42947

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQALTPSALRAWLQLAHAPGLPPAVLHALLDAFGSPAALLRASDEAICAASSAAAARA
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHCCCCCHHHHHHHHHHHHH
VRASERHDLDARTDAALAWLDAPGNAIVTLNDPVYPPRLRDLHDPPPLLYVKGRLELLHA
HHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHCCCCCCCEEEECCHHEEHHH
RGLAVVGSRHATPQGLADATRFAHALSDAGLAIVSGLALGIDGAAHRGGLAGRASTIAVI
CCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCCCCCCEEEEE
ATGADLVYPARHRTLAHEIAARGAILSEWPLGTPARASHFPQRNRLIAALAVGALVVEAA
EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEA
CCCCCEEHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHH
TAHIAQHSGSSPDNVEAAGTAEQRMGEPAAKAGSAVAAAASPVSEGAPPDTPAERSVLAA
HHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHH
LGYGPVTYEWLAEHSGLSDDVLYSALLALELAGRVASVPGGRFARLDAAPTPPRSGVLHS
HCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
PE
CC
>Mature Secondary Structure 
SPQALTPSALRAWLQLAHAPGLPPAVLHALLDAFGSPAALLRASDEAICAASSAAAARA
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHCCCCCHHHHHHHHHHHHH
VRASERHDLDARTDAALAWLDAPGNAIVTLNDPVYPPRLRDLHDPPPLLYVKGRLELLHA
HHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHCCCCCCCEEEECCHHEEHHH
RGLAVVGSRHATPQGLADATRFAHALSDAGLAIVSGLALGIDGAAHRGGLAGRASTIAVI
CCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCCCCCCEEEEE
ATGADLVYPARHRTLAHEIAARGAILSEWPLGTPARASHFPQRNRLIAALAVGALVVEAA
EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEA
CCCCCEEHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHH
TAHIAQHSGSSPDNVEAAGTAEQRMGEPAAKAGSAVAAAASPVSEGAPPDTPAERSVLAA
HHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHH
LGYGPVTYEWLAEHSGLSDDVLYSALLALELAGRVASVPGGRFARLDAAPTPPRSGVLHS
HCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
PE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]