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The map label for this gene is yqeB [H]

Identifier: 115353153

GI number: 115353153

Start: 3423968

End: 3424993

Strand: Direct

Name: yqeB [H]

Synonym: Bamb_3102

Alternate gene names: 115353153

Gene position: 3423968-3424993 (Clockwise)

Preceding gene: 115353152

Following gene: 115353160

Centisome position: 96.27

GC content: 70.86

Gene sequence:

>1026_bases
ATGGAAAGTGTGGATCTCGACGTGTTGAAGTCGAGCGCGCGCTGGCTCGACGAAGGGCGCCGCGTGCTGCTCGTGACGGT
CGTGAAGACGTGGGGCTCGTCGCCGCGCCCCGAAGGCGCGATGCTCGCGGTGCGCGAGGACGGGCTCGTGGTCGGCTCCG
TGTCCGGCGGGTGCATCGAGGACGACCTGATCGCCCGCGTGCATGCGAGCGGCATCGCGGCCGATGCGCGCCCGGAAGCG
GTCAAGTACGGCGTGACGGCCGAGGAAGCGCACCGCTTCGGGCTGCCCTGCGGCGGCACGATCCAGCTCGTGCTGGAGCC
GCTCACGCGCGACAGCGGGATTGCCGCGTTGTGCGCCGAGGTGGAGGCCGGCCGGCTCGTCACGCGCACGATGACGCTGG
CGACCGGCCGCGCGTCGCTGTCGCCCGCGCAGGCAACCGACGGGCTCGCGTTCGACGGCGAACGGCTCGTGACGATCCAC
GGGCCGCGCTACCGGATGCTCGTGATCGGTGCCGGGCAGTTGTCCCGCTATCTGTGCCAGATCGCGGTCGGGCTCGACTA
CCAGGTGACGGTTTGCGATCCGCGCGACGAGTACACGGATGCGTGGGACGTGCCGGGCACGCGCGTCGTGCACACGATGC
CCGACGACACCGTGCTCGACATGAAGCTCGACGCGCGTTCGGCCGTGATCGCGCTCACGCACGACCCGAAGCTCGACGAT
CTCGCGCTGATGGAGGCGCTCAAGACGCCCGCGTTCTACGTGGGCGCGCTCGGCTCGCGGCGCAACAACGCGGCGCGGCG
CGAGCGGCTGCTCGAATTCGACCTGAACGACGCGGAACTGGCGCGGCTGCACGGGCCGGCCGGCATCTACATCGGCAGCC
GCACGCCGCCGGAAATCGCGATCTCGATCCTCGCCGAGGTCACGGCCGCGAAGAACAACGTGTCGCTGCCGACGATCCTG
CAGGTCGAGGGGGCGAAGGCCGCCCGCGAGATCGCGGCCAACAACGGCGCGACCTGCGGCCTGTGA

Upstream 100 bases:

>100_bases
ATCCTCTCGATCCCCGCCACCGATCGGCCACGCGTCGGCGCACCGCAAGCAAGCCTGCGGCGGGCGCGTCATAATGCGCC
CAATCAATGAGGTAACGACG

Downstream 100 bases:

>100_bases
GGGCGGCGGCGCAGGGCCGTCGCGCCGGATGCGCGCACCACGCGCCGGCACCGAGCCGGCGCGTTTCAACCGTTACGTCA
GGTACGTTACGTCAGGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MESVDLDVLKSSARWLDEGRRVLLVTVVKTWGSSPRPEGAMLAVREDGLVVGSVSGGCIEDDLIARVHASGIAADARPEA
VKYGVTAEEAHRFGLPCGGTIQLVLEPLTRDSGIAALCAEVEAGRLVTRTMTLATGRASLSPAQATDGLAFDGERLVTIH
GPRYRMLVIGAGQLSRYLCQIAVGLDYQVTVCDPRDEYTDAWDVPGTRVVHTMPDDTVLDMKLDARSAVIALTHDPKLDD
LALMEALKTPAFYVGALGSRRNNAARRERLLEFDLNDAELARLHGPAGIYIGSRTPPEIAISILAEVTAAKNNVSLPTIL
QVEGAKAAREIAANNGATCGL

Sequences:

>Translated_341_residues
MESVDLDVLKSSARWLDEGRRVLLVTVVKTWGSSPRPEGAMLAVREDGLVVGSVSGGCIEDDLIARVHASGIAADARPEA
VKYGVTAEEAHRFGLPCGGTIQLVLEPLTRDSGIAALCAEVEAGRLVTRTMTLATGRASLSPAQATDGLAFDGERLVTIH
GPRYRMLVIGAGQLSRYLCQIAVGLDYQVTVCDPRDEYTDAWDVPGTRVVHTMPDDTVLDMKLDARSAVIALTHDPKLDD
LALMEALKTPAFYVGALGSRRNNAARRERLLEFDLNDAELARLHGPAGIYIGSRTPPEIAISILAEVTAAKNNVSLPTIL
QVEGAKAAREIAANNGATCGL
>Mature_341_residues
MESVDLDVLKSSARWLDEGRRVLLVTVVKTWGSSPRPEGAMLAVREDGLVVGSVSGGCIEDDLIARVHASGIAADARPEA
VKYGVTAEEAHRFGLPCGGTIQLVLEPLTRDSGIAALCAEVEAGRLVTRTMTLATGRASLSPAQATDGLAFDGERLVTIH
GPRYRMLVIGAGQLSRYLCQIAVGLDYQVTVCDPRDEYTDAWDVPGTRVVHTMPDDTVLDMKLDARSAVIALTHDPKLDD
LALMEALKTPAFYVGALGSRRNNAARRERLLEFDLNDAELARLHGPAGIYIGSRTPPEIAISILAEVTAAKNNVSLPTIL
QVEGAKAAREIAANNGATCGL

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=310, Percent_Identity=26.4516129032258, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1786477, Length=306, Percent_Identity=27.4509803921569, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 36318; Mature: 36318

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVDLDVLKSSARWLDEGRRVLLVTVVKTWGSSPRPEGAMLAVREDGLVVGSVSGGCIE
CCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCC
DDLIARVHASGIAADARPEAVKYGVTAEEAHRFGLPCGGTIQLVLEPLTRDSGIAALCAE
HHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEHH
VEAGRLVTRTMTLATGRASLSPAQATDGLAFDGERLVTIHGPRYRMLVIGAGQLSRYLCQ
CCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCCEEEEEECCCEEEEEEECCHHHHHHHH
IAVGLDYQVTVCDPRDEYTDAWDVPGTRVVHTMPDDTVLDMKLDARSAVIALTHDPKLDD
HHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCHH
LALMEALKTPAFYVGALGSRRNNAARRERLLEFDLNDAELARLHGPAGIYIGSRTPPEIA
HHHHHHHCCCCEEEECCCCCCCCHHHHHHHEEECCCHHHHHEECCCEEEEECCCCCHHHH
ISILAEVTAAKNNVSLPTILQVEGAKAAREIAANNGATCGL
HHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MESVDLDVLKSSARWLDEGRRVLLVTVVKTWGSSPRPEGAMLAVREDGLVVGSVSGGCIE
CCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCC
DDLIARVHASGIAADARPEAVKYGVTAEEAHRFGLPCGGTIQLVLEPLTRDSGIAALCAE
HHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEHH
VEAGRLVTRTMTLATGRASLSPAQATDGLAFDGERLVTIHGPRYRMLVIGAGQLSRYLCQ
CCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCCEEEEEECCCEEEEEEECCHHHHHHHH
IAVGLDYQVTVCDPRDEYTDAWDVPGTRVVHTMPDDTVLDMKLDARSAVIALTHDPKLDD
HHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCHH
LALMEALKTPAFYVGALGSRRNNAARRERLLEFDLNDAELARLHGPAGIYIGSRTPPEIA
HHHHHHHCCCCEEEECCCCCCCCHHHHHHHEEECCCHHHHHEECCCEEEEECCCCCHHHH
ISILAEVTAAKNNVSLPTILQVEGAKAAREIAANNGATCGL
HHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]